| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104526
Identifier: 197104526
GI number: 197104526
Start: 1195382
End: 1196203
Strand: Reverse
Name: 197104526
Synonym: PHZ_c1060
Alternate gene names: NA
Gene position: 1196203-1195382 (Counterclockwise)
Preceding gene: 197104527
Following gene: 197104525
Centisome position: 29.93
GC content: 76.52
Gene sequence:
>822_bases ATGCCGGGCCGCGGCGGCCTGATCGAGCTCCCAGCCGAGGCGGCGGGCGTCCCGCTGCGGGTCGTGGTGGATTCCGGCGC CGAGTTCTCGGCCATCGACCGCAGCCTCGCCCAGCGGCTGGAGCTGCCGCAGCCGGTCGCCCTGCCGATGCTGGCCTACG GCGTCAGCGGCGAGCCCAGCCTGACGCACACCGTCCGCTTCGACCTCGCGCTTCCGGGGCTGACCGTCCGCGGCATGCGC GCGGCGGTGCTCGACATCGCCGGCCTGTCCGCCGCCACCGGCCGGGACTTCCAGATCCTGCTCGGCCGCGACGTCCTGCG CGAGCTGGTGGTCGAGGCCGACTTCCCCCGCCGCCGCACGGCCTTCCACCGGCGGGGAACCTACGCCCGCCCGCACGACG CCATCGCCGTCCCGGTCACCCTCCAGGGCGGCGCGCCGATGACCCCCGTCCGCATCGAGGGCGCCGCGCCGCTGCGGGTG ATGGTCGACACCGGCGCCACCGGCGTGCTCGCCCTGTCCGCCGAGGCCGCACGCACCGCCGGCCTCCTCGCCCCCGGGCG CGAGGTGCGCAGAGCCCACTCCGTCAGCCTGGGCGGGGTCAGCCTCGACCAGATGGTCCGCGCCCGCACGGTCGAGGCCG CCGGGGTGACGCTGCGCGACGTCGACGTCCAGGTCTACGCCCCCAGCGTGCGCGGGCCGATCCCGCCCGGCCTCCTCGGC ACGGGCTTCCTGGAACGCTTCCGGATGGTGCTGGACCTGGCCGCCGCCGGCCTGTTCCTCGTGCCTCCCGGCCCGACCCT CGTGCGGGAACCAAGGCTCTAG
Upstream 100 bases:
>100_bases CGCCGCGGGCGGGGCGGCCCTCTATCTCCTCCGCGACCGGCTCCCCTGGCCCGCGCCCGGCGTCGAGTTCGCCGGGGGCG AGCGCACGCCGTGGATCCCG
Downstream 100 bases:
>100_bases CGCGGCATTCCGGCATCCAGGACTTCGGATAGGGAGATGCCGTCCATGACCCGCGCGATCTTTGTTTGCGCCGCCGCCGC CTCCGCGCTGGCCCTCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MPGRGGLIELPAEAAGVPLRVVVDSGAEFSAIDRSLAQRLELPQPVALPMLAYGVSGEPSLTHTVRFDLALPGLTVRGMR AAVLDIAGLSAATGRDFQILLGRDVLRELVVEADFPRRRTAFHRRGTYARPHDAIAVPVTLQGGAPMTPVRIEGAAPLRV MVDTGATGVLALSAEAARTAGLLAPGREVRRAHSVSLGGVSLDQMVRARTVEAAGVTLRDVDVQVYAPSVRGPIPPGLLG TGFLERFRMVLDLAAAGLFLVPPGPTLVREPRL
Sequences:
>Translated_273_residues MPGRGGLIELPAEAAGVPLRVVVDSGAEFSAIDRSLAQRLELPQPVALPMLAYGVSGEPSLTHTVRFDLALPGLTVRGMR AAVLDIAGLSAATGRDFQILLGRDVLRELVVEADFPRRRTAFHRRGTYARPHDAIAVPVTLQGGAPMTPVRIEGAAPLRV MVDTGATGVLALSAEAARTAGLLAPGREVRRAHSVSLGGVSLDQMVRARTVEAAGVTLRDVDVQVYAPSVRGPIPPGLLG TGFLERFRMVLDLAAAGLFLVPPGPTLVREPRL >Mature_272_residues PGRGGLIELPAEAAGVPLRVVVDSGAEFSAIDRSLAQRLELPQPVALPMLAYGVSGEPSLTHTVRFDLALPGLTVRGMRA AVLDIAGLSAATGRDFQILLGRDVLRELVVEADFPRRRTAFHRRGTYARPHDAIAVPVTLQGGAPMTPVRIEGAAPLRVM VDTGATGVLALSAEAARTAGLLAPGREVRRAHSVSLGGVSLDQMVRARTVEAAGVTLRDVDVQVYAPSVRGPIPPGLLGT GFLERFRMVLDLAAAGLFLVPPGPTLVREPRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28713; Mature: 28582
Theoretical pI: Translated: 10.76; Mature: 10.76
Prosite motif: PS00141 ASP_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGRGGLIELPAEAAGVPLRVVVDSGAEFSAIDRSLAQRLELPQPVALPMLAYGVSGEPS CCCCCCEEECCHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCHHHEECCCCCCC LTHTVRFDLALPGLTVRGMRAAVLDIAGLSAATGRDFQILLGRDVLRELVVEADFPRRRT EEEEEEEEEECCCEEECCHHEEHHHHHCCCCCCCCCEEEEECHHHHHHHHHCCCCCHHHH AFHRRGTYARPHDAIAVPVTLQGGAPMTPVRIEGAAPLRVMVDTGATGVLALSAEAARTA HHHHCCCCCCCCCCEEEEEEECCCCCCCCEEECCCCCEEEEEECCCCEEEEEECHHHHHH GLLAPGREVRRAHSVSLGGVSLDQMVRARTVEAAGVTLRDVDVQVYAPSVRGPIPPGLLG CCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCHH TGFLERFRMVLDLAAAGLFLVPPGPTLVREPRL HHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCC >Mature Secondary Structure PGRGGLIELPAEAAGVPLRVVVDSGAEFSAIDRSLAQRLELPQPVALPMLAYGVSGEPS CCCCCEEECCHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCHHHEECCCCCCC LTHTVRFDLALPGLTVRGMRAAVLDIAGLSAATGRDFQILLGRDVLRELVVEADFPRRRT EEEEEEEEEECCCEEECCHHEEHHHHHCCCCCCCCCEEEEECHHHHHHHHHCCCCCHHHH AFHRRGTYARPHDAIAVPVTLQGGAPMTPVRIEGAAPLRVMVDTGATGVLALSAEAARTA HHHHCCCCCCCCCCEEEEEEECCCCCCCCEEECCCCCEEEEEECCCCEEEEEECHHHHHH GLLAPGREVRRAHSVSLGGVSLDQMVRARTVEAAGVTLRDVDVQVYAPSVRGPIPPGLLG CCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCHH TGFLERFRMVLDLAAAGLFLVPPGPTLVREPRL HHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA