| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
Click here to switch to the map view.
The map label for this gene is 197104514
Identifier: 197104514
GI number: 197104514
Start: 1181323
End: 1182060
Strand: Direct
Name: 197104514
Synonym: PHZ_c1048
Alternate gene names: NA
Gene position: 1181323-1182060 (Clockwise)
Preceding gene: 197104510
Following gene: 197104515
Centisome position: 29.56
GC content: 74.39
Gene sequence:
>738_bases ATGACCGATATCGACACCACCGGCGGCCTTTCGGCCGACACCTCTGGCGACACCCGGGGCGCGGGCAAGAAGGGCCAGGC CAAGGCGGCCATCGGCCAGGCGGGCCATGCGCTGAAGCAGGAGGCCCAGACCTTCGCCTCGGCGGCGCAGGAACGGGCCC GGACCGAGGCCCAGAAGCGGACCCAGACGGCCACCAAGACCCTGGGCGACTTCGCCAACGCGGTCCGGCGGGCCGGCGAC GAGCTGGCCCAGGCCGACCAGAGCCCGGCCGCGCGGCTGATCGGACAGGCGGCCGACGGGCTGGAGAAGCTGACCCGGAA CCTGGAGGACAAGCAGCCCGAGGAGCTGCTGGACGCGGTGCGCGACTTCGGCCGCCGCCATCCCGCGGCGTTCATCGGCG GCGCCGTGCTGGCGGGCATCGCGCTGGGCCGGTTCGTCCGCGCCAGCGAGAGCGCCACGGGCCTGACGAGCGACTACGCG GGCGATCTTTCGGATACGGCGGGCGAGACGACCTATCCGCCGGCCGAGACGTCCACCTATGCGGCCGGCCCGGCGGCGAC CGCCGACGAGACCCTGGGCCTCTCGGGGGCCCTCTCGGGGGGCCTTTCGGGGGGCATGACCGGCGCCTCGGGCGTCGACG CCGAGGTGGAGACGCCCGGCCTCGTCCCCTCGGACGTGGAGGACCAGACCTCTGTGCTGGGCGTGGACGAGGATGCGCCC GAACGGCGGGGGACGTGA
Upstream 100 bases:
>100_bases CGATCGGCGGTCGGGCGCGTTTAGCTCTGGCGCGGGGCCGGCAGACGCGGCCGCGCGCGCGGAATTCGCCTGCTCGGGCG TGCGGCTTGCGGAGACGACC
Downstream 100 bases:
>100_bases CGCATGGATGATCCCCGCATCGGCGCCGACGCGCGGACGCTGCCCGAGCTCGTCTCCCAGCTCACGACCGACCTGGCCAC CCTGGTGCGCAAGGAATCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MTDIDTTGGLSADTSGDTRGAGKKGQAKAAIGQAGHALKQEAQTFASAAQERARTEAQKRTQTATKTLGDFANAVRRAGD ELAQADQSPAARLIGQAADGLEKLTRNLEDKQPEELLDAVRDFGRRHPAAFIGGAVLAGIALGRFVRASESATGLTSDYA GDLSDTAGETTYPPAETSTYAAGPAATADETLGLSGALSGGLSGGMTGASGVDAEVETPGLVPSDVEDQTSVLGVDEDAP ERRGT
Sequences:
>Translated_245_residues MTDIDTTGGLSADTSGDTRGAGKKGQAKAAIGQAGHALKQEAQTFASAAQERARTEAQKRTQTATKTLGDFANAVRRAGD ELAQADQSPAARLIGQAADGLEKLTRNLEDKQPEELLDAVRDFGRRHPAAFIGGAVLAGIALGRFVRASESATGLTSDYA GDLSDTAGETTYPPAETSTYAAGPAATADETLGLSGALSGGLSGGMTGASGVDAEVETPGLVPSDVEDQTSVLGVDEDAP ERRGT >Mature_244_residues TDIDTTGGLSADTSGDTRGAGKKGQAKAAIGQAGHALKQEAQTFASAAQERARTEAQKRTQTATKTLGDFANAVRRAGDE LAQADQSPAARLIGQAADGLEKLTRNLEDKQPEELLDAVRDFGRRHPAAFIGGAVLAGIALGRFVRASESATGLTSDYAG DLSDTAGETTYPPAETSTYAAGPAATADETLGLSGALSGGLSGGMTGASGVDAEVETPGLVPSDVEDQTSVLGVDEDAPE RRGT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24821; Mature: 24690
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDIDTTGGLSADTSGDTRGAGKKGQAKAAIGQAGHALKQEAQTFASAAQERARTEAQKR CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TQTATKTLGDFANAVRRAGDELAQADQSPAARLIGQAADGLEKLTRNLEDKQPEELLDAV HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH RDFGRRHPAAFIGGAVLAGIALGRFVRASESATGLTSDYAGDLSDTAGETTYPPAETSTY HHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHCCCCCCCCCCCCCCC AAGPAATADETLGLSGALSGGLSGGMTGASGVDAEVETPGLVPSDVEDQTSVLGVDEDAP CCCCCCCCHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEECCCCCCC ERRGT CCCCC >Mature Secondary Structure TDIDTTGGLSADTSGDTRGAGKKGQAKAAIGQAGHALKQEAQTFASAAQERARTEAQKR CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TQTATKTLGDFANAVRRAGDELAQADQSPAARLIGQAADGLEKLTRNLEDKQPEELLDAV HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH RDFGRRHPAAFIGGAVLAGIALGRFVRASESATGLTSDYAGDLSDTAGETTYPPAETSTY HHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHCCCCCCCCCCCCCCC AAGPAATADETLGLSGALSGGLSGGMTGASGVDAEVETPGLVPSDVEDQTSVLGVDEDAP CCCCCCCCHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEECCCCCCC ERRGT CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA