| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104509
Identifier: 197104509
GI number: 197104509
Start: 1168882
End: 1169259
Strand: Reverse
Name: 197104509
Synonym: PHZ_c1043
Alternate gene names: NA
Gene position: 1169259-1168882 (Counterclockwise)
Preceding gene: 197104511
Following gene: 197104508
Centisome position: 29.26
GC content: 72.49
Gene sequence:
>378_bases ATGAGCGATGATGACGCGTTCGACCAGCGTTTGTTGAAGTCGGCGACCGCCTATTCGAAGCTCTATCCCAGCATAGGCGC TCGCCTGAAGGCGGCCTACGAGTCGGGCCATCCGCTGGCGCGCGAGGCCGCCCGCGCCATCCGCGCCGCCGCCGAGCGGG CCGACGGCGCCCGCGCCCAGCACCTGCGCGACGTCCACGGCCTCTCCCCTCAGGAGACCCGCATCGTCCTGCATCTGGTG GACGGCGGGGCGGTCTCCAGCGCCGCCCTCGCCCTGGGCGTCGCCGAGAGCACGATCCGCAGCCACCTCAAGTCCACCTT CGCCAAGACCGGCGTCCGCCGCCAGGCCGACCTGCGCTCGCTGCTGCCCGGCGGCTGA
Upstream 100 bases:
>100_bases GCGGTCCATGATCTGGACGCCCCCCAGGCCAGCAAAGGGCTGGCCAACCCCCACCGAAACGCTCATTACTCGGTCCTGAA CACTTACCCCGTGGGCGACC
Downstream 100 bases:
>100_bases ACTCCCCCATCTGGGGGAAGCGCGGGACCGCGCGGTTTCCCTACCCTGCGCCGCGGGGGGAGTTGCATCCATGCCGCGTC TGTTCACCGCGACCGACCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MSDDDAFDQRLLKSATAYSKLYPSIGARLKAAYESGHPLAREAARAIRAAAERADGARAQHLRDVHGLSPQETRIVLHLV DGGAVSSAALALGVAESTIRSHLKSTFAKTGVRRQADLRSLLPGG
Sequences:
>Translated_125_residues MSDDDAFDQRLLKSATAYSKLYPSIGARLKAAYESGHPLAREAARAIRAAAERADGARAQHLRDVHGLSPQETRIVLHLV DGGAVSSAALALGVAESTIRSHLKSTFAKTGVRRQADLRSLLPGG >Mature_124_residues SDDDAFDQRLLKSATAYSKLYPSIGARLKAAYESGHPLAREAARAIRAAAERADGARAQHLRDVHGLSPQETRIVLHLVD GGAVSSAALALGVAESTIRSHLKSTFAKTGVRRQADLRSLLPGG
Specific function: Unknown
COG id: COG2771
COG function: function code K; DNA-binding HTH domain-containing proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13258; Mature: 13127
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDDDAFDQRLLKSATAYSKLYPSIGARLKAAYESGHPLAREAARAIRAAAERADGARAQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHH HLRDVHGLSPQETRIVLHLVDGGAVSSAALALGVAESTIRSHLKSTFAKTGVRRQADLRS HHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH LLPGG CCCCC >Mature Secondary Structure SDDDAFDQRLLKSATAYSKLYPSIGARLKAAYESGHPLAREAARAIRAAAERADGARAQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHH HLRDVHGLSPQETRIVLHLVDGGAVSSAALALGVAESTIRSHLKSTFAKTGVRRQADLRS HHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH LLPGG CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA