| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104504
Identifier: 197104504
GI number: 197104504
Start: 1163274
End: 1164335
Strand: Direct
Name: 197104504
Synonym: PHZ_c1038
Alternate gene names: NA
Gene position: 1163274-1164335 (Clockwise)
Preceding gene: 197104502
Following gene: 197104505
Centisome position: 29.11
GC content: 78.06
Gene sequence:
>1062_bases ATGGCGAGCTACCGACGGCGCCTGGAGCGCGACCTGGACGGCTGGATCGGCAGGGGTCTGGTGCCGGCGGCCAGCCGCGA GGCGATCCTGGCCGACCTGGGCGAGGCCCGCCGGCTGGACGCGGCGACGACCCTGGCGGTGCTGGGCGCCCTGCTGGCCG CGGCGGCGGCCGTGGCCTTCGTGGCGGCCAACTGGTCGGCGATTCCCCGCATCGTGCGCTTCGGGCTGATCCTGGGCGTC TTCCTGGCGTCGGCCGGCGGCGCGGCATGGGCCAGCGCGCGGGAGCGGACAGTCACGACGCACGCGCTGCTGGCCGTGGC GGCCATCGTGTTCGGGGCGGCCATCGGGCTGACCGGGCAGATCTTCGACCTGACGGGCGATGCGCAGGCGGCGCTGCGGG GCGCGGGCCTGGCCGCCGCCCTGCTGGCGCTGGCCGGCCGTTCGCCCTGGCCGGCGGCGGTGGCGCTGCTGTTCATCGGC CTTGGCGACATGAGCGGGAGCGGCTGGTTCGAGGGCGCGCCGCGCTGGCCCGGCTGGCTGGTCTGGGCCGCGCCGCTGGG GGCGGCCACGGCGCTGGCCTGGCGCTCGACGCCGCTGGCGCACGCCGCGGGGATCGCCTCGATCGCGGCGGTCCTGTCGC TGACGCAGATCGCGCCGCGCCATCCGGAAGCGCTGTTCCTCGCGGCGGCGGCCGTGCTGGCGGCGCTGGCGCTGGTTGCA CGCGGTCTGCGGGACGGCCGCGAGGGCGTGGCGAGCCCGCTCTACGGCTGGTGGACGTGGGGCGCGCTGATCTGGTTCGG GGCCGCCGGCCTGGGCGAGGCCTTCCGGGGCGTGCCGCACGCGGTCGCCTGGCTGGCGCTCGCGGCCGCGGTCCTGGTCC TGGGCCGGCACGACCGGCACGCGGCGGTGACCGGGGCCGGGGTGGTCGGCCTGTTCGCGGCGGGGGCGAGCCTGCTGTTC AACCTGGGGGTCGGGCTGATGACCTCGGCGGCGGTGTTCGCCGTCTGCGCCGTGGCGGCCCTCGTCGTGGCGCTGCTGCT GAAGCGGGGGCGGGCGGCGTGA
Upstream 100 bases:
>100_bases GGCAAACCGGTTCCTGCAATTCCCGGTGGAGTCCGCTCCGTCTCCCCGCCGCGTTGCCCCTGCGGGGAAGCTGGGGCACC CTCGCCGCGGGGAGGCCCGG
Downstream 100 bases:
>100_bases GGTTCGGGACGCCCGCGCGGATCGTGACGGCGGCGGGGCTGCTGGCCCTGGCGCTGATCGGCCTCGTCGTGCGCGAGGGC GTGGCCCGGGCGCAGGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 353; Mature: 352
Protein sequence:
>353_residues MASYRRRLERDLDGWIGRGLVPAASREAILADLGEARRLDAATTLAVLGALLAAAAAVAFVAANWSAIPRIVRFGLILGV FLASAGGAAWASARERTVTTHALLAVAAIVFGAAIGLTGQIFDLTGDAQAALRGAGLAAALLALAGRSPWPAAVALLFIG LGDMSGSGWFEGAPRWPGWLVWAAPLGAATALAWRSTPLAHAAGIASIAAVLSLTQIAPRHPEALFLAAAAVLAALALVA RGLRDGREGVASPLYGWWTWGALIWFGAAGLGEAFRGVPHAVAWLALAAAVLVLGRHDRHAAVTGAGVVGLFAAGASLLF NLGVGLMTSAAVFAVCAVAALVVALLLKRGRAA
Sequences:
>Translated_353_residues MASYRRRLERDLDGWIGRGLVPAASREAILADLGEARRLDAATTLAVLGALLAAAAAVAFVAANWSAIPRIVRFGLILGV FLASAGGAAWASARERTVTTHALLAVAAIVFGAAIGLTGQIFDLTGDAQAALRGAGLAAALLALAGRSPWPAAVALLFIG LGDMSGSGWFEGAPRWPGWLVWAAPLGAATALAWRSTPLAHAAGIASIAAVLSLTQIAPRHPEALFLAAAAVLAALALVA RGLRDGREGVASPLYGWWTWGALIWFGAAGLGEAFRGVPHAVAWLALAAAVLVLGRHDRHAAVTGAGVVGLFAAGASLLF NLGVGLMTSAAVFAVCAVAALVVALLLKRGRAA >Mature_352_residues ASYRRRLERDLDGWIGRGLVPAASREAILADLGEARRLDAATTLAVLGALLAAAAAVAFVAANWSAIPRIVRFGLILGVF LASAGGAAWASARERTVTTHALLAVAAIVFGAAIGLTGQIFDLTGDAQAALRGAGLAAALLALAGRSPWPAAVALLFIGL GDMSGSGWFEGAPRWPGWLVWAAPLGAATALAWRSTPLAHAAGIASIAAVLSLTQIAPRHPEALFLAAAAVLAALALVAR GLRDGREGVASPLYGWWTWGALIWFGAAGLGEAFRGVPHAVAWLALAAAVLVLGRHDRHAAVTGAGVVGLFAAGASLLFN LGVGLMTSAAVFAVCAVAALVVALLLKRGRAA
Specific function: Unknown
COG id: COG4872
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35720; Mature: 35589
Theoretical pI: Translated: 11.80; Mature: 11.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASYRRRLERDLDGWIGRGLVPAASREAILADLGEARRLDAATTLAVLGALLAAAAAVAF CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAANWSAIPRIVRFGLILGVFLASAGGAAWASARERTVTTHALLAVAAIVFGAAIGLTGQ HHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE IFDLTGDAQAALRGAGLAAALLALAGRSPWPAAVALLFIGLGDMSGSGWFEGAPRWPGWL EEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEE VWAAPLGAATALAWRSTPLAHAAGIASIAAVLSLTQIAPRHPEALFLAAAAVLAALALVA EEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH RGLRDGREGVASPLYGWWTWGALIWFGAAGLGEAFRGVPHAVAWLALAAAVLVLGRHDRH HHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCC AAVTGAGVVGLFAAGASLLFNLGVGLMTSAAVFAVCAVAALVVALLLKRGRAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure ASYRRRLERDLDGWIGRGLVPAASREAILADLGEARRLDAATTLAVLGALLAAAAAVAF CHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAANWSAIPRIVRFGLILGVFLASAGGAAWASARERTVTTHALLAVAAIVFGAAIGLTGQ HHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE IFDLTGDAQAALRGAGLAAALLALAGRSPWPAAVALLFIGLGDMSGSGWFEGAPRWPGWL EEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEE VWAAPLGAATALAWRSTPLAHAAGIASIAAVLSLTQIAPRHPEALFLAAAAVLAALALVA EEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH RGLRDGREGVASPLYGWWTWGALIWFGAAGLGEAFRGVPHAVAWLALAAAVLVLGRHDRH HHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCC AAVTGAGVVGLFAAGASLLFNLGVGLMTSAAVFAVCAVAALVVALLLKRGRAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA