| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is fusA [C]
Identifier: 197104412
GI number: 197104412
Start: 1039982
End: 1041994
Strand: Reverse
Name: fusA [C]
Synonym: PHZ_c0946
Alternate gene names: 197104412
Gene position: 1041994-1039982 (Counterclockwise)
Preceding gene: 197104413
Following gene: 197104409
Centisome position: 26.07
GC content: 73.12
Gene sequence:
>2013_bases ATGGCAATCCAGGAAAAGGGGTCCGTTCGGGCGCTTGCGCTCGTGGGCCCCACAAGCGCCGGCAAGACCGCCCTGATGGA GGCCCTGCTGCACGCCACCGGCGCCGCCGACCGCCGGGGCGAGGTGGGCGACAGCAGTCCCGAGGCCAAGGCCCGCGGCC ATTCGGTCGAGCTGAACCTGGCGGGCTTCGAGTTCATGGGCGACCGCTACGCCGTCGTCGACTGCCCCGGGTCGCTGGAG TTCTGCGCCGAGATCGACGCCGCCCTGCCCGCCGTGGACCTGGCCGTCGTGGTGGCCGAGCCCGACCCCGCCAAGGCCGT GCTGCTGCAGCCCACCCTGCGCGAGCTGGAGCGCCTGGGCGTGCCGCACGCCCTCTTCATCAACAAGATGGACCAGGCCC GCGGGTCCCTCCAGGAGCTGCTGGAGGCGCTGGCCCCCGTCTCGTCCTCGCCGCTGGTGGCCCGGCAGATCCCGACGTGG GAAGGCGACAAGGTCTCGGGCTTCATCGACCTGGCGCTCGAGCGGTGCTTCGTCTGGCGGCCGGGACAGCCCAGCCAGCA GGTGGACATCCCCGGCGAGCTGCGCGACGCCGAGGCCGAGGCGCGCTTCCACATGCTGGAGCAGATCGCCGACTTCGACG ACGAGCTGCTGGAGCAGCTCCTCTCCGACGTGGTCCCCAGCCGCGACGCGGTCTTCGCCGACCTCGTGCGCGAGATGAAC GCAGGGCAGATCACGCCGGTCTTCTTCGGCTCAGCCCAGAACGGCTTCGGCGTGCGCCGCCTGCTGAAGGCGCTGCGCCA CGAGACGCCCCCGCCATCCCGCGCCGCCGAGCGGCTGGGCGTCGAGGCGGGCGCCTATGTGCTGAAGGCCGCCTACGCCG GCCAGTCGGGCAAGCTGGCCTACGCCCGCGTCTTCGGCGCCCCGCTGGCGGACGGGGCCGAGTTCGTTCTGCCGGACGGC CAGAAGCAGCGCGCCGGCGGCCTCTTCGGCGTCCAGGGCGCGGCGCTGAAGAAGATCGCCGAGGCGCCGGTGGGCGAGGT CTGCGCCATCGGCAAGGTCGAGGCCGCCCAGGCGGGCCAGATCCTCTCCACCACCGGCCGGCCGCAGCAGGTGAAGGCGA CCGCCCGCCCGCGCCGGCCGCTGTTCGCCGTCGCCCTGATCGCCAAGAACCGCAACGACGACGTCCGCCTCTCGGGCGCG CTCGGCAAGCTGGTCGAGGAGGACCCGGGTCTGTCGCTGACCCACGACGCCGAGGCGCGCCAGGTGCTGCTGGCCGGCCA GGGCGAGGGGCACGTGCGGCTGGCGCTGGAGCGGCTGAAGCGGCGCTTCGGCGTCGAGATCGACACCCAGCAACCGAAGA CCCCCTACCGCGAGACCATCCGGGGGGCGGTGACCCAGCGGGCGCGCCACAAGAAGCAGTCCGGCGGCCACGGCCAATTC GCTGACGTGACCATCGAGGTGAAGCCCCTGCCCCGCGGCTCCGGCGTCGTCTTCCAGTCGAGGATCGTCGGCGGCGCCGT GCCCAGGCAGTGGGTCCCGGCGGTCGAGGACGGCGTGCGCGACGGCCTCGCCCACGGGCTCCTGGGCTTCCCGGTCACCG ACCTGGAGGTCACGCTGGTGGACGGCATGACCCACAGCGTCGACTCCTCGGAAATGGCCTTCCGCACCGCCGGGCGCCTG GCGATCGAGGAGGCCCTGAAGGCGGCCGGCACGATCCTCCTGGAGCCGATCGAGAAGCTGGTCGTCTATTCGCCCTCGCC GAGCGCCTCGAACGTCACCTCGGCGCTCACCGCGCGGCGGGGCCAGATCCTGGGCCTGGGGCCGCGGGAGGACTGGCGCG GCTGGGAGCGGATCGAGGCCTACCTGCCGCAGAGCGAGCGCCAGGACCTGATCGCCGAGCTGCGCGGGCTGACCCAGGGC CTGGGCGCCTTCGAGGCCGACTTCGACCACATGAGCGAGCTCCACGGCCGCCTCGCCGAGGAGGCCGCGAACCACGCGAG GGAGGGAGCGTAG
Upstream 100 bases:
>100_bases GTCGGCCGCTCATCACAAGCGCCTCGGACGCTTCCGACCCCCGCAGGTTCCGGGGGAAACGGGGGCGTCCGGGACGCCTT CGGTGCGTGGGAGAACGACC
Downstream 100 bases:
>100_bases GGAGCCGAGGAAGAACGCGTTCGCTCTCCTCTTTCGTCATCGCCCGGCTTGTCCGGGCGACCCAGCCTGGGGCGGCGCCG CCCCTGCTGCGGACGGGCGT
Product: elongation factor G
Products: GDP; phosphate
Alternate protein names: NA
Number of amino acids: Translated: 670; Mature: 669
Protein sequence:
>670_residues MAIQEKGSVRALALVGPTSAGKTALMEALLHATGAADRRGEVGDSSPEAKARGHSVELNLAGFEFMGDRYAVVDCPGSLE FCAEIDAALPAVDLAVVVAEPDPAKAVLLQPTLRELERLGVPHALFINKMDQARGSLQELLEALAPVSSSPLVARQIPTW EGDKVSGFIDLALERCFVWRPGQPSQQVDIPGELRDAEAEARFHMLEQIADFDDELLEQLLSDVVPSRDAVFADLVREMN AGQITPVFFGSAQNGFGVRRLLKALRHETPPPSRAAERLGVEAGAYVLKAAYAGQSGKLAYARVFGAPLADGAEFVLPDG QKQRAGGLFGVQGAALKKIAEAPVGEVCAIGKVEAAQAGQILSTTGRPQQVKATARPRRPLFAVALIAKNRNDDVRLSGA LGKLVEEDPGLSLTHDAEARQVLLAGQGEGHVRLALERLKRRFGVEIDTQQPKTPYRETIRGAVTQRARHKKQSGGHGQF ADVTIEVKPLPRGSGVVFQSRIVGGAVPRQWVPAVEDGVRDGLAHGLLGFPVTDLEVTLVDGMTHSVDSSEMAFRTAGRL AIEEALKAAGTILLEPIEKLVVYSPSPSASNVTSALTARRGQILGLGPREDWRGWERIEAYLPQSERQDLIAELRGLTQG LGAFEADFDHMSELHGRLAEEAANHAREGA
Sequences:
>Translated_670_residues MAIQEKGSVRALALVGPTSAGKTALMEALLHATGAADRRGEVGDSSPEAKARGHSVELNLAGFEFMGDRYAVVDCPGSLE FCAEIDAALPAVDLAVVVAEPDPAKAVLLQPTLRELERLGVPHALFINKMDQARGSLQELLEALAPVSSSPLVARQIPTW EGDKVSGFIDLALERCFVWRPGQPSQQVDIPGELRDAEAEARFHMLEQIADFDDELLEQLLSDVVPSRDAVFADLVREMN AGQITPVFFGSAQNGFGVRRLLKALRHETPPPSRAAERLGVEAGAYVLKAAYAGQSGKLAYARVFGAPLADGAEFVLPDG QKQRAGGLFGVQGAALKKIAEAPVGEVCAIGKVEAAQAGQILSTTGRPQQVKATARPRRPLFAVALIAKNRNDDVRLSGA LGKLVEEDPGLSLTHDAEARQVLLAGQGEGHVRLALERLKRRFGVEIDTQQPKTPYRETIRGAVTQRARHKKQSGGHGQF ADVTIEVKPLPRGSGVVFQSRIVGGAVPRQWVPAVEDGVRDGLAHGLLGFPVTDLEVTLVDGMTHSVDSSEMAFRTAGRL AIEEALKAAGTILLEPIEKLVVYSPSPSASNVTSALTARRGQILGLGPREDWRGWERIEAYLPQSERQDLIAELRGLTQG LGAFEADFDHMSELHGRLAEEAANHAREGA >Mature_669_residues AIQEKGSVRALALVGPTSAGKTALMEALLHATGAADRRGEVGDSSPEAKARGHSVELNLAGFEFMGDRYAVVDCPGSLEF CAEIDAALPAVDLAVVVAEPDPAKAVLLQPTLRELERLGVPHALFINKMDQARGSLQELLEALAPVSSSPLVARQIPTWE GDKVSGFIDLALERCFVWRPGQPSQQVDIPGELRDAEAEARFHMLEQIADFDDELLEQLLSDVVPSRDAVFADLVREMNA GQITPVFFGSAQNGFGVRRLLKALRHETPPPSRAAERLGVEAGAYVLKAAYAGQSGKLAYARVFGAPLADGAEFVLPDGQ KQRAGGLFGVQGAALKKIAEAPVGEVCAIGKVEAAQAGQILSTTGRPQQVKATARPRRPLFAVALIAKNRNDDVRLSGAL GKLVEEDPGLSLTHDAEARQVLLAGQGEGHVRLALERLKRRFGVEIDTQQPKTPYRETIRGAVTQRARHKKQSGGHGQFA DVTIEVKPLPRGSGVVFQSRIVGGAVPRQWVPAVEDGVRDGLAHGLLGFPVTDLEVTLVDGMTHSVDSSEMAFRTAGRLA IEEALKAAGTILLEPIEKLVVYSPSPSASNVTSALTARRGQILGLGPREDWRGWERIEAYLPQSERQDLIAELRGLTQGL GAFEADFDHMSELHGRLAEEAANHAREGA
Specific function: This Protein Promotes The GTP-Dependent Translocation Of The Nascent Protein Chain From The A-Site To The P-Site Of The Ribosome. [C]
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=697, Percent_Identity=27.6901004304161, Blast_Score=248, Evalue=1e-65, Organism=Homo sapiens, GI25306287, Length=664, Percent_Identity=24.3975903614458, Blast_Score=153, Evalue=5e-37, Organism=Homo sapiens, GI19923640, Length=325, Percent_Identity=25.2307692307692, Blast_Score=96, Evalue=9e-20, Organism=Homo sapiens, GI25306283, Length=325, Percent_Identity=25.2307692307692, Blast_Score=96, Evalue=1e-19, Organism=Escherichia coli, GI1789738, Length=691, Percent_Identity=28.2199710564399, Blast_Score=251, Evalue=9e-68, Organism=Escherichia coli, GI1790835, Length=300, Percent_Identity=27.3333333333333, Blast_Score=69, Evalue=8e-13, Organism=Caenorhabditis elegans, GI17533571, Length=678, Percent_Identity=26.401179941003, Blast_Score=241, Evalue=1e-63, Organism=Caenorhabditis elegans, GI17556745, Length=667, Percent_Identity=21.4392803598201, Blast_Score=113, Evalue=4e-25, Organism=Saccharomyces cerevisiae, GI6323098, Length=681, Percent_Identity=27.4596182085169, Blast_Score=237, Evalue=5e-63, Organism=Saccharomyces cerevisiae, GI6322359, Length=771, Percent_Identity=20.7522697795071, Blast_Score=114, Evalue=4e-26, Organism=Drosophila melanogaster, GI24582462, Length=680, Percent_Identity=27.6470588235294, Blast_Score=239, Evalue=6e-63, Organism=Drosophila melanogaster, GI221458488, Length=719, Percent_Identity=22.2531293463143, Blast_Score=139, Evalue=8e-33,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 71741; Mature: 71610
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIQEKGSVRALALVGPTSAGKTALMEALLHATGAADRRGEVGDSSPEAKARGHSVELNL CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCEEEEEE AGFEFMGDRYAVVDCPGSLEFCAEIDAALPAVDLAVVVAEPDPAKAVLLQPTLRELERLG CCEEECCCEEEEEECCCCHHHHHHHHHHCCCEEEEEEEECCCCCCEEEECHHHHHHHHCC VPHALFINKMDQARGSLQELLEALAPVSSSPLVARQIPTWEGDKVSGFIDLALERCFVWR CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHEEEC PGQPSQQVDIPGELRDAEAEARFHMLEQIADFDDELLEQLLSDVVPSRDAVFADLVREMN CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHCC AGQITPVFFGSAQNGFGVRRLLKALRHETPPPSRAAERLGVEAGAYVLKAAYAGQSGKLA CCCCCEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCEE YARVFGAPLADGAEFVLPDGQKQRAGGLFGVQGAALKKIAEAPVGEVCAIGKVEAAQAGQ EEEECCCCCCCCCEEECCCCCCHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHCCC ILSTTGRPQQVKATARPRRPLFAVALIAKNRNDDVRLSGALGKLVEEDPGLSLTHDAEAR HHHCCCCCCEEECCCCCCCCEEEEEEEECCCCCCEEEEHHHHHHHHCCCCCCEECCCCCC QVLLAGQGEGHVRLALERLKRRFGVEIDTQQPKTPYRETIRGAVTQRARHKKQSGGHGQF EEEEECCCCCHHHHHHHHHHHHHCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCE ADVTIEVKPLPRGSGVVFQSRIVGGAVPRQWVPAVEDGVRDGLAHGLLGFPVTDLEVTLV EEEEEEEEECCCCCCCEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEE DGMTHSVDSSEMAFRTAGRLAIEEALKAAGTILLEPIEKLVVYSPSPSASNVTSALTARR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHEEECCCCCHHHHHHHHHHCC GQILGLGPREDWRGWERIEAYLPQSERQDLIAELRGLTQGLGAFEADFDHMSELHGRLAE CCEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHH EAANHAREGA HHHHHHCCCC >Mature Secondary Structure AIQEKGSVRALALVGPTSAGKTALMEALLHATGAADRRGEVGDSSPEAKARGHSVELNL CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCEEEEEE AGFEFMGDRYAVVDCPGSLEFCAEIDAALPAVDLAVVVAEPDPAKAVLLQPTLRELERLG CCEEECCCEEEEEECCCCHHHHHHHHHHCCCEEEEEEEECCCCCCEEEECHHHHHHHHCC VPHALFINKMDQARGSLQELLEALAPVSSSPLVARQIPTWEGDKVSGFIDLALERCFVWR CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHEEEC PGQPSQQVDIPGELRDAEAEARFHMLEQIADFDDELLEQLLSDVVPSRDAVFADLVREMN CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHCC AGQITPVFFGSAQNGFGVRRLLKALRHETPPPSRAAERLGVEAGAYVLKAAYAGQSGKLA CCCCCEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCEE YARVFGAPLADGAEFVLPDGQKQRAGGLFGVQGAALKKIAEAPVGEVCAIGKVEAAQAGQ EEEECCCCCCCCCEEECCCCCCHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHCCC ILSTTGRPQQVKATARPRRPLFAVALIAKNRNDDVRLSGALGKLVEEDPGLSLTHDAEAR HHHCCCCCCEEECCCCCCCCEEEEEEEECCCCCCEEEEHHHHHHHHCCCCCCEECCCCCC QVLLAGQGEGHVRLALERLKRRFGVEIDTQQPKTPYRETIRGAVTQRARHKKQSGGHGQF EEEEECCCCCHHHHHHHHHHHHHCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCE ADVTIEVKPLPRGSGVVFQSRIVGGAVPRQWVPAVEDGVRDGLAHGLLGFPVTDLEVTLV EEEEEEEEECCCCCCCEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEE DGMTHSVDSSEMAFRTAGRLAIEEALKAAGTILLEPIEKLVVYSPSPSASNVTSALTARR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHEEECCCCCHHHHHHHHHHCC GQILGLGPREDWRGWERIEAYLPQSERQDLIAELRGLTQGLGAFEADFDHMSELHGRLAE CCEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHH EAANHAREGA HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]