Click here to switch to the map view.

The map label for this gene is 197104409

Identifier: 197104409

GI number: 197104409

Start: 1037575

End: 1038453

Strand: Reverse

Name: 197104409

Synonym: PHZ_c0943

Alternate gene names: NA

Gene position: 1038453-1037575 (Counterclockwise)

Preceding gene: 197104412

Following gene: 197104405

Centisome position: 25.99

GC content: 76.45

Gene sequence:

>879_bases
TTGCGGCGGTCCTGCGATGGAGGCGAACCTGCCGATCCGGCGGGGCCGCGGAAGGCCGCTTTGCGCGAACGGCGCCCATT
CTGCGCGAGCGGCGCCGCATGGCAGACTTGGGCCGTGATCCGACTCGGCCCGCCCCTCGCCAGACGCCTCGCCGCCGAGA
CCGCGCTGCTGACCGCCATGGGCGTCGTGGTGGCCTTCCTGGGCCCGTTCCAGAGCGCCGCCTGGCCGCTGGGCCTGCGG
ATGGCCTACTGGCTGATCCTGATCGTCGGCGGCGGCGCCATCGGCATCGCCCTGGACGAGGCGGCGCGCCGCCGGCTCGC
CGGCTTCTGGCCGCGGCTGCTGGCGGTGAGCGTCGGCATGACGCCCCTGGTGACCCTGCTGGTGGTGGTCGTGGCGCACC
TGCTGCTGGGCTCGCCCCTGCGCCTGCTCGACCCGGCCGGGCTGGCGTTCCAGGTCTTCCTGCTGAGCTTCGCCATCATG
GCCCTGCGGCAGCTGGCGCTGGCCCGGACGGAGCCTCGACCGCTGCCGGGCGCCGCGTCCGGGGCCGAGCCGCCGCCGGA
CCCGACCGCCGGGTTCCGCCGGCGGCTGTCGGCGCGGCGGCGGGCGGCGGCGCTGATCGCGGTGGAGGCCGAGGACCACT
ACCTGCGCGTCCACACCGACGCCGGCGACGAGCTGGTCACCGCCCGCTTCGGCGACGCCCTGGCCGAACTGGCCCAGGCG
CCCGGCTTCCAGACCCACCGGTCGTGGTGGGTGGCCGCCGACGCCATCGAGACGGTGCGCTGGCGCCGGGGCGCAGGCGA
AGCGCGGCTGAAGACCGGGCTGGCCGTCCCGATCAGCCGCCGCCACGCCGCGGCGTTGAAGGCGGCCGGCTGGTTCTAG

Upstream 100 bases:

>100_bases
CCACATAGCGGTAGGAGACCAGCGCGACGAGCACGCTGAGCAGGGCCCCGAACGCCCACACGCCCTTGGAAACACTCGCC
TTCATCACGTTTCGCCCTCC

Downstream 100 bases:

>100_bases
CCCCCTGTCCTGGGCCCCGATCCTGTGCCCGCCCCTAGACCTGGGAGGCGGCCCAGGCGGCGATGTGGCGCTCCAGCACC
GTCAGGGGCATGGGCCCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: Response Regulator Of LytR/AlgR Family

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MRRSCDGGEPADPAGPRKAALRERRPFCASGAAWQTWAVIRLGPPLARRLAAETALLTAMGVVVAFLGPFQSAAWPLGLR
MAYWLILIVGGGAIGIALDEAARRRLAGFWPRLLAVSVGMTPLVTLLVVVVAHLLLGSPLRLLDPAGLAFQVFLLSFAIM
ALRQLALARTEPRPLPGAASGAEPPPDPTAGFRRRLSARRRAAALIAVEAEDHYLRVHTDAGDELVTARFGDALAELAQA
PGFQTHRSWWVAADAIETVRWRRGAGEARLKTGLAVPISRRHAAALKAAGWF

Sequences:

>Translated_292_residues
MRRSCDGGEPADPAGPRKAALRERRPFCASGAAWQTWAVIRLGPPLARRLAAETALLTAMGVVVAFLGPFQSAAWPLGLR
MAYWLILIVGGGAIGIALDEAARRRLAGFWPRLLAVSVGMTPLVTLLVVVVAHLLLGSPLRLLDPAGLAFQVFLLSFAIM
ALRQLALARTEPRPLPGAASGAEPPPDPTAGFRRRLSARRRAAALIAVEAEDHYLRVHTDAGDELVTARFGDALAELAQA
PGFQTHRSWWVAADAIETVRWRRGAGEARLKTGLAVPISRRHAAALKAAGWF
>Mature_292_residues
MRRSCDGGEPADPAGPRKAALRERRPFCASGAAWQTWAVIRLGPPLARRLAAETALLTAMGVVVAFLGPFQSAAWPLGLR
MAYWLILIVGGGAIGIALDEAARRRLAGFWPRLLAVSVGMTPLVTLLVVVVAHLLLGSPLRLLDPAGLAFQVFLLSFAIM
ALRQLALARTEPRPLPGAASGAEPPPDPTAGFRRRLSARRRAAALIAVEAEDHYLRVHTDAGDELVTARFGDALAELAQA
PGFQTHRSWWVAADAIETVRWRRGAGEARLKTGLAVPISRRHAAALKAAGWF

Specific function: Unknown

COG id: COG3279

COG function: function code KT; Response regulator of the LytR/AlgR family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31282; Mature: 31282

Theoretical pI: Translated: 11.87; Mature: 11.87

Prosite motif: PS50930 HTH_LYTTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRSCDGGEPADPAGPRKAALRERRPFCASGAAWQTWAVIRLGPPLARRLAAETALLTAM
CCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHEEEEEEECCHHHHHHHHHHHHHHHH
GVVVAFLGPFQSAAWPLGLRMAYWLILIVGGGAIGIALDEAARRRLAGFWPRLLAVSVGM
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCH
TPLVTLLVVVVAHLLLGSPLRLLDPAGLAFQVFLLSFAIMALRQLALARTEPRPLPGAAS
HHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
GAEPPPDPTAGFRRRLSARRRAAALIAVEAEDHYLRVHTDAGDELVTARFGDALAELAQA
CCCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHC
PGFQTHRSWWVAADAIETVRWRRGAGEARLKTGLAVPISRRHAAALKAAGWF
CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MRRSCDGGEPADPAGPRKAALRERRPFCASGAAWQTWAVIRLGPPLARRLAAETALLTAM
CCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHEEEEEEECCHHHHHHHHHHHHHHHH
GVVVAFLGPFQSAAWPLGLRMAYWLILIVGGGAIGIALDEAARRRLAGFWPRLLAVSVGM
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCH
TPLVTLLVVVVAHLLLGSPLRLLDPAGLAFQVFLLSFAIMALRQLALARTEPRPLPGAAS
HHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
GAEPPPDPTAGFRRRLSARRRAAALIAVEAEDHYLRVHTDAGDELVTARFGDALAELAQA
CCCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHC
PGFQTHRSWWVAADAIETVRWRRGAGEARLKTGLAVPISRRHAAALKAAGWF
CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA