| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104355
Identifier: 197104355
GI number: 197104355
Start: 982935
End: 983408
Strand: Reverse
Name: 197104355
Synonym: PHZ_c0889
Alternate gene names: NA
Gene position: 983408-982935 (Counterclockwise)
Preceding gene: 197104361
Following gene: 197104354
Centisome position: 24.61
GC content: 69.41
Gene sequence:
>474_bases ATGGACGGCGGCGACCAGGACCAGGAATACATCTCGCACCTGAGCACCGTGTCCGAGGGCGAGTGGGCCGGCTGGTCGTA CTATCCGGGCGGCGACCCCTACGAGGACCTCGCCGGGCCGTTCTACTTCAGGGAACGGGACGGGCGGCCGGTCTGCGCCT TCCGCGCCGAGCGCAAGCACATGAACGGCGGCATGTTCATGCACGGCGGCTGCGTGATGACGTTCGCGGACTTCTGCCTG TTCGTGATCGCCCGCGAGGCGCTGGCCGACAGCCGCGCCGTCACCGCCACCTTCAACGGCGAGTTCGTCGGCTCGGCGGC CGTCGGCGACCTCGTGGAATGCACCGGCGAAGTAGTGAAGGCCGGGCGCAGCATGGTGTTCGTGCGCGGCCTGATCGTGA ACGCCTCGCGCGGCGGCGAGCCGATGATGAGCTTCTCGGCGGTGCTGAAGAAGACCGGCCCGCGCCGCGGCTGA
Upstream 100 bases:
>100_bases CCTTGCATCTTGGCTCCTCGGGAGGCTAGTCGGCGGGCGCGCAAACTAGTGTTTGAATCCGCCGGGGGCAAACCCCGCGC AGCGACGATCCGGAGGGGAA
Downstream 100 bases:
>100_bases GGCGCCGGCCGGAAACAGACCGGCTCCCGGGCGTTGTGCCGGCAACGCCAGGAGCCGCGCCATGACCAAGGTCCTAGTCC TCTACCATTCCACCTACGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Thioesterase Family Protein
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MDGGDQDQEYISHLSTVSEGEWAGWSYYPGGDPYEDLAGPFYFRERDGRPVCAFRAERKHMNGGMFMHGGCVMTFADFCL FVIAREALADSRAVTATFNGEFVGSAAVGDLVECTGEVVKAGRSMVFVRGLIVNASRGGEPMMSFSAVLKKTGPRRG
Sequences:
>Translated_157_residues MDGGDQDQEYISHLSTVSEGEWAGWSYYPGGDPYEDLAGPFYFRERDGRPVCAFRAERKHMNGGMFMHGGCVMTFADFCL FVIAREALADSRAVTATFNGEFVGSAAVGDLVECTGEVVKAGRSMVFVRGLIVNASRGGEPMMSFSAVLKKTGPRRG >Mature_157_residues MDGGDQDQEYISHLSTVSEGEWAGWSYYPGGDPYEDLAGPFYFRERDGRPVCAFRAERKHMNGGMFMHGGCVMTFADFCL FVIAREALADSRAVTATFNGEFVGSAAVGDLVECTGEVVKAGRSMVFVRGLIVNASRGGEPMMSFSAVLKKTGPRRG
Specific function: Unknown
COG id: COG2050
COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17041; Mature: 17041
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGGDQDQEYISHLSTVSEGEWAGWSYYPGGDPYEDLAGPFYFRERDGRPVCAFRAERKH CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCEEEECCCCCEEEEEEHHHHH MNGGMFMHGGCVMTFADFCLFVIAREALADSRAVTATFNGEFVGSAAVGDLVECTGEVVK CCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH AGRSMVFVRGLIVNASRGGEPMMSFSAVLKKTGPRRG CCCCEEEEEHEEEECCCCCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure MDGGDQDQEYISHLSTVSEGEWAGWSYYPGGDPYEDLAGPFYFRERDGRPVCAFRAERKH CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCEEEECCCCCEEEEEEHHHHH MNGGMFMHGGCVMTFADFCLFVIAREALADSRAVTATFNGEFVGSAAVGDLVECTGEVVK CCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH AGRSMVFVRGLIVNASRGGEPMMSFSAVLKKTGPRRG CCCCEEEEEHEEEECCCCCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA