Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is 197104355

Identifier: 197104355

GI number: 197104355

Start: 982935

End: 983408

Strand: Reverse

Name: 197104355

Synonym: PHZ_c0889

Alternate gene names: NA

Gene position: 983408-982935 (Counterclockwise)

Preceding gene: 197104361

Following gene: 197104354

Centisome position: 24.61

GC content: 69.41

Gene sequence:

>474_bases
ATGGACGGCGGCGACCAGGACCAGGAATACATCTCGCACCTGAGCACCGTGTCCGAGGGCGAGTGGGCCGGCTGGTCGTA
CTATCCGGGCGGCGACCCCTACGAGGACCTCGCCGGGCCGTTCTACTTCAGGGAACGGGACGGGCGGCCGGTCTGCGCCT
TCCGCGCCGAGCGCAAGCACATGAACGGCGGCATGTTCATGCACGGCGGCTGCGTGATGACGTTCGCGGACTTCTGCCTG
TTCGTGATCGCCCGCGAGGCGCTGGCCGACAGCCGCGCCGTCACCGCCACCTTCAACGGCGAGTTCGTCGGCTCGGCGGC
CGTCGGCGACCTCGTGGAATGCACCGGCGAAGTAGTGAAGGCCGGGCGCAGCATGGTGTTCGTGCGCGGCCTGATCGTGA
ACGCCTCGCGCGGCGGCGAGCCGATGATGAGCTTCTCGGCGGTGCTGAAGAAGACCGGCCCGCGCCGCGGCTGA

Upstream 100 bases:

>100_bases
CCTTGCATCTTGGCTCCTCGGGAGGCTAGTCGGCGGGCGCGCAAACTAGTGTTTGAATCCGCCGGGGGCAAACCCCGCGC
AGCGACGATCCGGAGGGGAA

Downstream 100 bases:

>100_bases
GGCGCCGGCCGGAAACAGACCGGCTCCCGGGCGTTGTGCCGGCAACGCCAGGAGCCGCGCCATGACCAAGGTCCTAGTCC
TCTACCATTCCACCTACGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Thioesterase Family Protein

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MDGGDQDQEYISHLSTVSEGEWAGWSYYPGGDPYEDLAGPFYFRERDGRPVCAFRAERKHMNGGMFMHGGCVMTFADFCL
FVIAREALADSRAVTATFNGEFVGSAAVGDLVECTGEVVKAGRSMVFVRGLIVNASRGGEPMMSFSAVLKKTGPRRG

Sequences:

>Translated_157_residues
MDGGDQDQEYISHLSTVSEGEWAGWSYYPGGDPYEDLAGPFYFRERDGRPVCAFRAERKHMNGGMFMHGGCVMTFADFCL
FVIAREALADSRAVTATFNGEFVGSAAVGDLVECTGEVVKAGRSMVFVRGLIVNASRGGEPMMSFSAVLKKTGPRRG
>Mature_157_residues
MDGGDQDQEYISHLSTVSEGEWAGWSYYPGGDPYEDLAGPFYFRERDGRPVCAFRAERKHMNGGMFMHGGCVMTFADFCL
FVIAREALADSRAVTATFNGEFVGSAAVGDLVECTGEVVKAGRSMVFVRGLIVNASRGGEPMMSFSAVLKKTGPRRG

Specific function: Unknown

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17041; Mature: 17041

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGGDQDQEYISHLSTVSEGEWAGWSYYPGGDPYEDLAGPFYFRERDGRPVCAFRAERKH
CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCEEEECCCCCEEEEEEHHHHH
MNGGMFMHGGCVMTFADFCLFVIAREALADSRAVTATFNGEFVGSAAVGDLVECTGEVVK
CCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH
AGRSMVFVRGLIVNASRGGEPMMSFSAVLKKTGPRRG
CCCCEEEEEHEEEECCCCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDGGDQDQEYISHLSTVSEGEWAGWSYYPGGDPYEDLAGPFYFRERDGRPVCAFRAERKH
CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCEEEECCCCCEEEEEEHHHHH
MNGGMFMHGGCVMTFADFCLFVIAREALADSRAVTATFNGEFVGSAAVGDLVECTGEVVK
CCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH
AGRSMVFVRGLIVNASRGGEPMMSFSAVLKKTGPRRG
CCCCEEEEEHEEEECCCCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA