| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is ilvI [H]
Identifier: 197104339
GI number: 197104339
Start: 965511
End: 967244
Strand: Reverse
Name: ilvI [H]
Synonym: PHZ_c0873
Alternate gene names: 197104339
Gene position: 967244-965511 (Counterclockwise)
Preceding gene: 197104340
Following gene: 197104338
Centisome position: 24.2
GC content: 68.92
Gene sequence:
>1734_bases GTGGTGCGCGCCCTGATCGACCAGGGCGTGGAGGTGCTGTTCGGCTATCCCGGCGGGGCGGTCCTGCCGATCTACGACGC GCTGTTCGCCGAGCCGCGCCTGCGGCACGTGCTGGTGCGCCACGAGCAGGGCGCGACCCACGCGGCCGAGGGCTACGCCC GCTCGACCGGCAAGCCCGGCGTCGTCCTGGTGACTTCGGGCCCCGGCGCGACCAATGCGGTCACCGGCATCGTCGACGCC CTGATGGACTCCATCCCGATGGTCGTCATTACCGGCCAGGTCGCCACCCACCTGATCGGCACCGACGCCTTCCAGGAATG CGACACCATCGGCATCACCCGGCCCTGCACCAAGCACAACTACCTGGTGAAGTCGGTCGAGGACCTGCCGCGGATCATCC ACGAGGCGTTCCACATCGCCACCTCGGGCCGGCCGGGGCCGGTGGTCATCGACATCCCCAAGGACGTGCAGTTCGCCAAG GGCGCCTACCGCGGCCCCGCCGAGGTGACCCACGCCCACAACTACGCCCCCCGCACGAAGGGCGAGCCGTCGAAGATCGC CGAGGCCGTGGCGCTGCTGGCCAAGGCGCGGCGGCCGATCCTCTACACGGGCGGCGGCGTCATCAATTCCGGTCCCCGCG CCGCCGAGCTGGTGCGCGAGCTGGCGGCCCTGACCGGCGCGCCGGTCACCTCGACCCTGATGGGCCTGGGCGCCTTCCCC GCCTCCAGCCCGCAGTGGCTGGGCATGGTGGGCATGCACGGCTCGTTCGAGGCCAACAACGCCATGCACGACTGCGACGT CATGGTGGCCATCGGCGCGCGCTTCGACGACCGGGTGACCGGCCGCCTGGACGCCTTCGCCCCCACCAGCCGGAAGATCC ACATCGACGTGGACGCCAGCTCGATCGGCAAGAACGTGCGCGTCGACGTCGGCATCGTCGGCGACGCGGCCAGCGTGCTC GAGGACCTGATCGGCGCCTGGAAGCAGCGGAACCTGAAGCTGGACAAGGCCGCGGTCGCCGACTGGTGGCGCGAGATCGA GGCCTGGCGGGCGCGCGATTCCTTCCGCTACCGGCCGGATTCCAAGCTCATCAAGCCGCAGCACGCCATCCAGCGCCTCT ACGAGCTGACCAAGGACCGGGACACCTACGTCACCACCGAAGTCGGCCAGCACCAGATGTGGGCGGCCCAGTTCTACCAC TTCGACGAGCCGAACCGCTGGATGACCTCGGGCGGGCTCGGCACCATGGGCTACGGCCTGCCGGCCGCGGTGGGCGTGCA GATCGCCCATCCGGACAGCCTGGTCATCGACATCGCAGGCGACGCCAGCGTGCAGATGACCATGCAGGAGATGTCGACGG CGGTTCAGTACGACCTGCCGATCAAGATCTTCATCCTCAACAACGAGTGGATGGGGATGGTGCGCCAGTGGCAGCAGCTG CTGCACGGCGAGCGCTACTCGCACTCGTATTCGGCCAGCCTGCCCGACTTCGTGAAGCTGGCCGAGGCCTACGGCTGCGT CGGCCTGCGCGCCGAGCACCCCGACGAACTGGACGACGCGATCCGCGAGATGATCGACGTGCGCAAGCCGGTGATCTTCG ACTGCCGGGTGACCAAGGAAGAGAACTGCTTCCCGATGATCCCCTCGGGCAAGGCGCACAACGAGATGATCATGGCCGAG GAATCCCGCGACCTGGGCTCGATCATCGACGACGCGGGCAAGCGGCTGGTGTGA
Upstream 100 bases:
>100_bases TATTGTCCTCACGTCCAGAGCCCCTCCCCCGAAAGGTCCGACCATGACCGCCCACCAGACGATCGAAGCCCAGCAGGACA CCATCTCGGGCGCCGAGATC
Downstream 100 bases:
>100_bases GCCTGGACGCGTACGAGGCGCTGGTCGCCCTCGCCCGGCGGCAGCAGGGCGAGGGCCGCTACCGCGAGTCCGAGGAGAGC CTGAACCGGGCGCTGACCCT
Product: acetolactate synthase 3 catalytic subunit
Products: NA
Alternate protein names: AHAS; Acetohydroxy-acid synthase large subunit; ALS [H]
Number of amino acids: Translated: 577; Mature: 577
Protein sequence:
>577_residues MVRALIDQGVEVLFGYPGGAVLPIYDALFAEPRLRHVLVRHEQGATHAAEGYARSTGKPGVVLVTSGPGATNAVTGIVDA LMDSIPMVVITGQVATHLIGTDAFQECDTIGITRPCTKHNYLVKSVEDLPRIIHEAFHIATSGRPGPVVIDIPKDVQFAK GAYRGPAEVTHAHNYAPRTKGEPSKIAEAVALLAKARRPILYTGGGVINSGPRAAELVRELAALTGAPVTSTLMGLGAFP ASSPQWLGMVGMHGSFEANNAMHDCDVMVAIGARFDDRVTGRLDAFAPTSRKIHIDVDASSIGKNVRVDVGIVGDAASVL EDLIGAWKQRNLKLDKAAVADWWREIEAWRARDSFRYRPDSKLIKPQHAIQRLYELTKDRDTYVTTEVGQHQMWAAQFYH FDEPNRWMTSGGLGTMGYGLPAAVGVQIAHPDSLVIDIAGDASVQMTMQEMSTAVQYDLPIKIFILNNEWMGMVRQWQQL LHGERYSHSYSASLPDFVKLAEAYGCVGLRAEHPDELDDAIREMIDVRKPVIFDCRVTKEENCFPMIPSGKAHNEMIMAE ESRDLGSIIDDAGKRLV
Sequences:
>Translated_577_residues MVRALIDQGVEVLFGYPGGAVLPIYDALFAEPRLRHVLVRHEQGATHAAEGYARSTGKPGVVLVTSGPGATNAVTGIVDA LMDSIPMVVITGQVATHLIGTDAFQECDTIGITRPCTKHNYLVKSVEDLPRIIHEAFHIATSGRPGPVVIDIPKDVQFAK GAYRGPAEVTHAHNYAPRTKGEPSKIAEAVALLAKARRPILYTGGGVINSGPRAAELVRELAALTGAPVTSTLMGLGAFP ASSPQWLGMVGMHGSFEANNAMHDCDVMVAIGARFDDRVTGRLDAFAPTSRKIHIDVDASSIGKNVRVDVGIVGDAASVL EDLIGAWKQRNLKLDKAAVADWWREIEAWRARDSFRYRPDSKLIKPQHAIQRLYELTKDRDTYVTTEVGQHQMWAAQFYH FDEPNRWMTSGGLGTMGYGLPAAVGVQIAHPDSLVIDIAGDASVQMTMQEMSTAVQYDLPIKIFILNNEWMGMVRQWQQL LHGERYSHSYSASLPDFVKLAEAYGCVGLRAEHPDELDDAIREMIDVRKPVIFDCRVTKEENCFPMIPSGKAHNEMIMAE ESRDLGSIIDDAGKRLV >Mature_577_residues MVRALIDQGVEVLFGYPGGAVLPIYDALFAEPRLRHVLVRHEQGATHAAEGYARSTGKPGVVLVTSGPGATNAVTGIVDA LMDSIPMVVITGQVATHLIGTDAFQECDTIGITRPCTKHNYLVKSVEDLPRIIHEAFHIATSGRPGPVVIDIPKDVQFAK GAYRGPAEVTHAHNYAPRTKGEPSKIAEAVALLAKARRPILYTGGGVINSGPRAAELVRELAALTGAPVTSTLMGLGAFP ASSPQWLGMVGMHGSFEANNAMHDCDVMVAIGARFDDRVTGRLDAFAPTSRKIHIDVDASSIGKNVRVDVGIVGDAASVL EDLIGAWKQRNLKLDKAAVADWWREIEAWRARDSFRYRPDSKLIKPQHAIQRLYELTKDRDTYVTTEVGQHQMWAAQFYH FDEPNRWMTSGGLGTMGYGLPAAVGVQIAHPDSLVIDIAGDASVQMTMQEMSTAVQYDLPIKIFILNNEWMGMVRQWQQL LHGERYSHSYSASLPDFVKLAEAYGCVGLRAEHPDELDDAIREMIDVRKPVIFDCRVTKEENCFPMIPSGKAHNEMIMAE ESRDLGSIIDDAGKRLV
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI93004078, Length=557, Percent_Identity=25.8527827648115, Blast_Score=174, Evalue=3e-43, Organism=Homo sapiens, GI21361361, Length=571, Percent_Identity=25.0437828371278, Blast_Score=142, Evalue=7e-34, Organism=Escherichia coli, GI87081685, Length=568, Percent_Identity=51.5845070422535, Blast_Score=594, Evalue=1e-171, Organism=Escherichia coli, GI1790104, Length=560, Percent_Identity=42.6785714285714, Blast_Score=447, Evalue=1e-127, Organism=Escherichia coli, GI1786717, Length=564, Percent_Identity=33.6879432624113, Blast_Score=302, Evalue=4e-83, Organism=Escherichia coli, GI1787096, Length=547, Percent_Identity=28.7020109689214, Blast_Score=198, Evalue=1e-51, Organism=Escherichia coli, GI1788716, Length=560, Percent_Identity=25.8928571428571, Blast_Score=161, Evalue=1e-40, Organism=Caenorhabditis elegans, GI17542570, Length=518, Percent_Identity=27.2200772200772, Blast_Score=139, Evalue=3e-33, Organism=Caenorhabditis elegans, GI17531299, Length=498, Percent_Identity=26.9076305220884, Blast_Score=135, Evalue=4e-32, Organism=Caenorhabditis elegans, GI17531301, Length=498, Percent_Identity=26.9076305220884, Blast_Score=135, Evalue=6e-32, Organism=Saccharomyces cerevisiae, GI6323755, Length=575, Percent_Identity=48.5217391304348, Blast_Score=514, Evalue=1e-146, Organism=Saccharomyces cerevisiae, GI6320816, Length=473, Percent_Identity=26.0042283298097, Blast_Score=122, Evalue=1e-28, Organism=Drosophila melanogaster, GI19922626, Length=478, Percent_Identity=26.9874476987448, Blast_Score=160, Evalue=2e-39,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 63077; Mature: 63077
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: PS00187 TPP_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRALIDQGVEVLFGYPGGAVLPIYDALFAEPRLRHVLVRHEQGATHAAEGYARSTGKPG CCHHHHHCCCEEEEECCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHCHHCCCCCCC VVLVTSGPGATNAVTGIVDALMDSIPMVVITGQVATHLIGTDAFQECDTIGITRPCTKHN EEEEECCCCCHHHHHHHHHHHHHCCCEEEEECHHHHHHHCCHHHHHHCCCCCCCCCCCCH YLVKSVEDLPRIIHEAFHIATSGRPGPVVIDIPKDVQFAKGAYRGPAEVTHAHNYAPRTK HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHCCCCCCCHHHHHCCCCCCCCC GEPSKIAEAVALLAKARRPILYTGGGVINSGPRAAELVRELAALTGAPVTSTLMGLGAFP CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCC ASSPQWLGMVGMHGSFEANNAMHDCDVMVAIGARFDDRVTGRLDAFAPTSRKIHIDVDAS CCCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECHH SIGKNVRVDVGIVGDAASVLEDLIGAWKQRNLKLDKAAVADWWREIEAWRARDSFRYRPD HCCCCEEEEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC SKLIKPQHAIQRLYELTKDRDTYVTTEVGQHQMWAAQFYHFDEPNRWMTSGGLGTMGYGL CCCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHEECCCCCCEEECCCCCCCCCCC PAAVGVQIAHPDSLVIDIAGDASVQMTMQEMSTAVQYDLPIKIFILNNEWMGMVRQWQQL CHHHEEEEECCCCEEEEECCCCCHHHHHHHHHHHHEECCCEEEEEECCHHHHHHHHHHHH LHGERYSHSYSASLPDFVKLAEAYGCVGLRAEHPDELDDAIREMIDVRKPVIFDCRVTKE HCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCC ENCFPMIPSGKAHNEMIMAEESRDLGSIIDDAGKRLV CCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCC >Mature Secondary Structure MVRALIDQGVEVLFGYPGGAVLPIYDALFAEPRLRHVLVRHEQGATHAAEGYARSTGKPG CCHHHHHCCCEEEEECCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHCHHCCCCCCC VVLVTSGPGATNAVTGIVDALMDSIPMVVITGQVATHLIGTDAFQECDTIGITRPCTKHN EEEEECCCCCHHHHHHHHHHHHHCCCEEEEECHHHHHHHCCHHHHHHCCCCCCCCCCCCH YLVKSVEDLPRIIHEAFHIATSGRPGPVVIDIPKDVQFAKGAYRGPAEVTHAHNYAPRTK HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHCCCCCCCHHHHHCCCCCCCCC GEPSKIAEAVALLAKARRPILYTGGGVINSGPRAAELVRELAALTGAPVTSTLMGLGAFP CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCC ASSPQWLGMVGMHGSFEANNAMHDCDVMVAIGARFDDRVTGRLDAFAPTSRKIHIDVDAS CCCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECHH SIGKNVRVDVGIVGDAASVLEDLIGAWKQRNLKLDKAAVADWWREIEAWRARDSFRYRPD HCCCCEEEEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC SKLIKPQHAIQRLYELTKDRDTYVTTEVGQHQMWAAQFYHFDEPNRWMTSGGLGTMGYGL CCCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHEECCCCCCEEECCCCCCCCCCC PAAVGVQIAHPDSLVIDIAGDASVQMTMQEMSTAVQYDLPIKIFILNNEWMGMVRQWQQL CHHHEEEEECCCCEEEEECCCCCHHHHHHHHHHHHEECCCEEEEEECCHHHHHHHHHHHH LHGERYSHSYSASLPDFVKLAEAYGCVGLRAEHPDELDDAIREMIDVRKPVIFDCRVTKE HCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCC ENCFPMIPSGKAHNEMIMAEESRDLGSIIDDAGKRLV CCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]