| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is ptsI [H]
Identifier: 197104305
GI number: 197104305
Start: 924329
End: 926593
Strand: Reverse
Name: ptsI [H]
Synonym: PHZ_c0839
Alternate gene names: 197104305
Gene position: 926593-924329 (Counterclockwise)
Preceding gene: 197104307
Following gene: 197104304
Centisome position: 23.19
GC content: 72.94
Gene sequence:
>2265_bases ATGCCGGCGCAAGGCATGGCCATTCGAGGACAGCGGAGCCTGCTTCGGCAGATCCGGGAGGCGCTGGCGGGCGGCGGCCC GGCCCAGGCCCGTCTCGACATGGTCGTGCGGATCATCGCCCTGTCGATGGTCGCCGAGGTCTGCTCGATCTACCTGCGCC GGGCGACCGGCGAGATGGAGCTGTTCGCCACCGAGGGCCTGGAGCCTGGCGCGGTCCACGTCACCCGCATGAAGCCCGGC GAGGGCCTGGTCGGCGAGATCATGCGCCTGGGCCGGCCGCTGAACCTGGCCGACGCCCCCGAGCACCCGGCGTTCTCGTA CCGCCCGGAGACGGGCGAAGACCCCTACCACGCGTTCCTGGGCGTGCCGCTGCTGCGCGGCGGGCGGGCGATCGGCGTGC TGGTCGTCCAGAACCGCACCGCCCGGGTCTACACCGAGGACGAGGTCGAGGACCTGCAGATCATCGCCATGGTCCTGGCC GAGATGGTGGCCTCGGGCGAGCTGATCGGCGTCGAGGAGATGAACGGGGTCGAGCTGGCGCCCCGCCGGCCCGACCGCCT GAAGGGCTCCAGGTTCGCCGAGGGTCTGGCCTACGGCGTGGCCGTGCTGCACGAGCCGCCGGTCGCGCCCAGCCAGCTGC TGTCGGAGGACGCCGCCGCCGAGGAGATCCGGCTCAAGGGCGCCATCGAGGCGCTGCAGGCCCAGATCGACGAGATGCTG GAGGGCCAGCACGGCCTGGTGGACGCCTCGTACGAGGTGCTCGAGACCTACCGCATGTTCGCCCACGACCGGGGCTGGAA CCGCAGCCTCGAGGACGCCGTGCGCAACGGCCTGACCGCCGAGGCCGCCGTCGAGCGCGTACGCTCCGAACACCGCGCGC GCCTGGGCCAGGCGCGCGATCCCTATCTGCGCGAGCGGCTGCACGACCTGGAAGACCTGAACGACCGGCTGCTGCGCCAC CTGGCCGGCGACGGCCACGTGGCCCGCGACCTGCCCGAGAACGCGATCCTGATCGCCCGCAACCTGGGCCCCGCGGACCT GCTCGAGTACGACCGCACCAGGCTGCGCGGCCTGCTGCTGGAGGAGGGTTCGTCGGCCAGCCACGCGGCGATCGTGGCCC GGGCGCTGGACATCCCCTGCGTCGGCCGCCTGCCCGGCCTGCGCGACCGGGTCTCGGAGGGCGACCCGGTGATCGTCGAC GCCGAGACGGGCGAGGCCTACCTGCGCCCGCGGACCGACGTGGTGAAGGCCATCCAGGCCCGCATCGACGTGCGCCGACA GCGGCAGGCCGCCTTCGCCAAGCTGCGCGAGACGCCCGCCTTCACCCGCGACGGGGTGAAGATCACCCTGCTGATGAACG CCGGCCTCGACGTGGACCTCGAGAGCATGGCCGACGCGGGCGCCGAAGGGATCGGCCTGTTCCGCACCGAGTTCCAGTTC ATGGTCTCGGAGGAGATGCCCCGTTTCAACGCCCAGGCGGCGCTCTACGGCCGGGTGATGGACGCGGCCGGCGACAAGCC GGTGACCTTCCGCACCCTGGACCTGGGCGGCGACAAGGTGCTGCCGTACCTGGAGGCCGAGCGCGAGGACAACCCGGCCC TGGGCTGGCGGGCGATCCGCATGGGCCTGGACCGCCCCGCCCTGCTGCGCCTGCAGCTGCGGGCGCTGATCGCCGCCGCC AAGGGGCGTGCGCTGCGGATCATGTTCCCGCTGGTGGCGAGCTGCGACGAGTTCCGCGCCGCCCGCGCCCTGGTGGACAC AGAGGTGGCCTGGGCCCTGCGGCGAGGCCGGCCGGCGCCGTCGCGCCTGGACGTCGGCGCGATGATCGAGGCGCCGTCGG TGATCTGGCACCTCGACGCCCTGCTGCCGATGACCGACTTCGTCAGCGTCGGCACCAACGACCTGATGCAGTACCTGTTC GCCGCCGACCGCGGGAACCCGCGGGTGGCCGACCGCTACGATCCCCTGTCGCCGCCGGCGCTGCGGGCGCTGGAGACGAT CCAGCGGGCCTGCGCCGAGACCGGCACGCCGGTCAGCGTCTGCGGCGAGATGGCGGGCCGGCCGCTGGAGGCCTTCACCC TGGTGGCCCTGGGCTTCGAGCGGCTGTCGATGCCGCCTGCGGGGATCGGGCCGGTGAAGCAGATGGTGCTGTCGTGCGAC CGCGAGGCGGCCCGGCGGGGCGTTTCGGCCCTGCTGAAGTCCGGCGCGGGATCGGTGCGCAACGAGATCGAAACCTTGGC GCGGAAACTCTATCTCGCCGTGTAG
Upstream 100 bases:
>100_bases GCAGGCGCAGCAAACCGTCGTCGAATTGGCCTCTTCCCGTCTCGGAACGGAGAGATAAAGCTGTTAGGCAACGGGCCGAG ACGGAGGACGCCAGGGACGG
Downstream 100 bases:
>100_bases GCGAATCAGCCCACCGGACGTGACCGAACAACGCATTGAGCACTACCTGAACGCGTGCCACGCTCCCTACGAGTCACGAT CCCCAGACGCGGGCGCCGGC
Product: phosphoenolpyruvate-protein phosphotransferase
Products: NA
Alternate protein names: Enzyme I-Ntr; Phosphotransferase system, enzyme I [H]
Number of amino acids: Translated: 754; Mature: 753
Protein sequence:
>754_residues MPAQGMAIRGQRSLLRQIREALAGGGPAQARLDMVVRIIALSMVAEVCSIYLRRATGEMELFATEGLEPGAVHVTRMKPG EGLVGEIMRLGRPLNLADAPEHPAFSYRPETGEDPYHAFLGVPLLRGGRAIGVLVVQNRTARVYTEDEVEDLQIIAMVLA EMVASGELIGVEEMNGVELAPRRPDRLKGSRFAEGLAYGVAVLHEPPVAPSQLLSEDAAAEEIRLKGAIEALQAQIDEML EGQHGLVDASYEVLETYRMFAHDRGWNRSLEDAVRNGLTAEAAVERVRSEHRARLGQARDPYLRERLHDLEDLNDRLLRH LAGDGHVARDLPENAILIARNLGPADLLEYDRTRLRGLLLEEGSSASHAAIVARALDIPCVGRLPGLRDRVSEGDPVIVD AETGEAYLRPRTDVVKAIQARIDVRRQRQAAFAKLRETPAFTRDGVKITLLMNAGLDVDLESMADAGAEGIGLFRTEFQF MVSEEMPRFNAQAALYGRVMDAAGDKPVTFRTLDLGGDKVLPYLEAEREDNPALGWRAIRMGLDRPALLRLQLRALIAAA KGRALRIMFPLVASCDEFRAARALVDTEVAWALRRGRPAPSRLDVGAMIEAPSVIWHLDALLPMTDFVSVGTNDLMQYLF AADRGNPRVADRYDPLSPPALRALETIQRACAETGTPVSVCGEMAGRPLEAFTLVALGFERLSMPPAGIGPVKQMVLSCD REAARRGVSALLKSGAGSVRNEIETLARKLYLAV
Sequences:
>Translated_754_residues MPAQGMAIRGQRSLLRQIREALAGGGPAQARLDMVVRIIALSMVAEVCSIYLRRATGEMELFATEGLEPGAVHVTRMKPG EGLVGEIMRLGRPLNLADAPEHPAFSYRPETGEDPYHAFLGVPLLRGGRAIGVLVVQNRTARVYTEDEVEDLQIIAMVLA EMVASGELIGVEEMNGVELAPRRPDRLKGSRFAEGLAYGVAVLHEPPVAPSQLLSEDAAAEEIRLKGAIEALQAQIDEML EGQHGLVDASYEVLETYRMFAHDRGWNRSLEDAVRNGLTAEAAVERVRSEHRARLGQARDPYLRERLHDLEDLNDRLLRH LAGDGHVARDLPENAILIARNLGPADLLEYDRTRLRGLLLEEGSSASHAAIVARALDIPCVGRLPGLRDRVSEGDPVIVD AETGEAYLRPRTDVVKAIQARIDVRRQRQAAFAKLRETPAFTRDGVKITLLMNAGLDVDLESMADAGAEGIGLFRTEFQF MVSEEMPRFNAQAALYGRVMDAAGDKPVTFRTLDLGGDKVLPYLEAEREDNPALGWRAIRMGLDRPALLRLQLRALIAAA KGRALRIMFPLVASCDEFRAARALVDTEVAWALRRGRPAPSRLDVGAMIEAPSVIWHLDALLPMTDFVSVGTNDLMQYLF AADRGNPRVADRYDPLSPPALRALETIQRACAETGTPVSVCGEMAGRPLEAFTLVALGFERLSMPPAGIGPVKQMVLSCD REAARRGVSALLKSGAGSVRNEIETLARKLYLAV >Mature_753_residues PAQGMAIRGQRSLLRQIREALAGGGPAQARLDMVVRIIALSMVAEVCSIYLRRATGEMELFATEGLEPGAVHVTRMKPGE GLVGEIMRLGRPLNLADAPEHPAFSYRPETGEDPYHAFLGVPLLRGGRAIGVLVVQNRTARVYTEDEVEDLQIIAMVLAE MVASGELIGVEEMNGVELAPRRPDRLKGSRFAEGLAYGVAVLHEPPVAPSQLLSEDAAAEEIRLKGAIEALQAQIDEMLE GQHGLVDASYEVLETYRMFAHDRGWNRSLEDAVRNGLTAEAAVERVRSEHRARLGQARDPYLRERLHDLEDLNDRLLRHL AGDGHVARDLPENAILIARNLGPADLLEYDRTRLRGLLLEEGSSASHAAIVARALDIPCVGRLPGLRDRVSEGDPVIVDA ETGEAYLRPRTDVVKAIQARIDVRRQRQAAFAKLRETPAFTRDGVKITLLMNAGLDVDLESMADAGAEGIGLFRTEFQFM VSEEMPRFNAQAALYGRVMDAAGDKPVTFRTLDLGGDKVLPYLEAEREDNPALGWRAIRMGLDRPALLRLQLRALIAAAK GRALRIMFPLVASCDEFRAARALVDTEVAWALRRGRPAPSRLDVGAMIEAPSVIWHLDALLPMTDFVSVGTNDLMQYLFA ADRGNPRVADRYDPLSPPALRALETIQRACAETGTPVSVCGEMAGRPLEAFTLVALGFERLSMPPAGIGPVKQMVLSCDR EAARRGVSALLKSGAGSVRNEIETLARKLYLAV
Specific function: Component of the phosphoenolpyruvate-dependent nitrogen- metabolic phosphotransferase system (nitrogen-metabolic PTS), that seems to be involved in regulating nitrogen metabolism. Enzyme I- Ntr transfers the phosphoryl group from phosphoenolpyruvate (PEP)
COG id: COG3605
COG function: function code T; Signal transduction protein containing GAF and PtsI domains
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GAF domain [H]
Homologues:
Organism=Escherichia coli, GI1789193, Length=748, Percent_Identity=35.5614973262032, Blast_Score=359, Evalue=1e-100, Organism=Escherichia coli, GI1788756, Length=449, Percent_Identity=34.5211581291759, Blast_Score=287, Evalue=2e-78, Organism=Escherichia coli, GI1788726, Length=549, Percent_Identity=33.1511839708561, Blast_Score=265, Evalue=6e-72, Organism=Escherichia coli, GI48994992, Length=484, Percent_Identity=30.7851239669421, Blast_Score=223, Evalue=4e-59, Organism=Escherichia coli, GI1787994, Length=486, Percent_Identity=24.2798353909465, Blast_Score=66, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003018 - InterPro: IPR008279 - InterPro: IPR006318 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR008731 - InterPro: IPR015813 [H]
Pfam domain/function: PF01590 GAF; PF05524 PEP-utilisers_N; PF00391 PEP-utilizers; PF02896 PEP-utilizers_C [H]
EC number: =2.7.3.9 [H]
Molecular weight: Translated: 82411; Mature: 82280
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: PS00742 PEP_ENZYMES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAQGMAIRGQRSLLRQIREALAGGGPAQARLDMVVRIIALSMVAEVCSIYLRRATGEME CCCCCCEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE LFATEGLEPGAVHVTRMKPGEGLVGEIMRLGRPLNLADAPEHPAFSYRPETGEDPYHAFL EEEECCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH GVPLLRGGRAIGVLVVQNRTARVYTEDEVEDLQIIAMVLAEMVASGELIGVEEMNGVELA CCHHHCCCCEEEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCC PRRPDRLKGSRFAEGLAYGVAVLHEPPVAPSQLLSEDAAAEEIRLKGAIEALQAQIDEML CCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGQHGLVDASYEVLETYRMFAHDRGWNRSLEDAVRNGLTAEAAVERVRSEHRARLGQARD CCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC PYLRERLHDLEDLNDRLLRHLAGDGHVARDLPENAILIARNLGPADLLEYDRTRLRGLLL HHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH EEGSSASHAAIVARALDIPCVGRLPGLRDRVSEGDPVIVDAETGEAYLRPRTDVVKAIQA CCCCCCHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHH RIDVRRQRQAAFAKLRETPAFTRDGVKITLLMNAGLDVDLESMADAGAEGIGLFRTEFQF HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCHHHHHCCCCCCCHHHHHHHHH MVSEEMPRFNAQAALYGRVMDAAGDKPVTFRTLDLGGDKVLPYLEAEREDNPALGWRAIR HHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHCCCCCCCCHHHHHHH MGLDRPALLRLQLRALIAAAKGRALRIMFPLVASCDEFRAARALVDTEVAWALRRGRPAP HCCCCHHHHHHHHHHHHHHHCCCEEEEHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCC SRLDVGAMIEAPSVIWHLDALLPMTDFVSVGTNDLMQYLFAADRGNPRVADRYDPLSPPA CCCCCCHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHH LRALETIQRACAETGTPVSVCGEMAGRPLEAFTLVALGFERLSMPPAGIGPVKQMVLSCD HHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCC REAARRGVSALLKSGAGSVRNEIETLARKLYLAV HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure PAQGMAIRGQRSLLRQIREALAGGGPAQARLDMVVRIIALSMVAEVCSIYLRRATGEME CCCCCEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE LFATEGLEPGAVHVTRMKPGEGLVGEIMRLGRPLNLADAPEHPAFSYRPETGEDPYHAFL EEEECCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH GVPLLRGGRAIGVLVVQNRTARVYTEDEVEDLQIIAMVLAEMVASGELIGVEEMNGVELA CCHHHCCCCEEEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCC PRRPDRLKGSRFAEGLAYGVAVLHEPPVAPSQLLSEDAAAEEIRLKGAIEALQAQIDEML CCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGQHGLVDASYEVLETYRMFAHDRGWNRSLEDAVRNGLTAEAAVERVRSEHRARLGQARD CCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC PYLRERLHDLEDLNDRLLRHLAGDGHVARDLPENAILIARNLGPADLLEYDRTRLRGLLL HHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH EEGSSASHAAIVARALDIPCVGRLPGLRDRVSEGDPVIVDAETGEAYLRPRTDVVKAIQA CCCCCCHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHH RIDVRRQRQAAFAKLRETPAFTRDGVKITLLMNAGLDVDLESMADAGAEGIGLFRTEFQF HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCHHHHHCCCCCCCHHHHHHHHH MVSEEMPRFNAQAALYGRVMDAAGDKPVTFRTLDLGGDKVLPYLEAEREDNPALGWRAIR HHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHCCCCCCCCHHHHHHH MGLDRPALLRLQLRALIAAAKGRALRIMFPLVASCDEFRAARALVDTEVAWALRRGRPAP HCCCCHHHHHHHHHHHHHHHCCCEEEEHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCC SRLDVGAMIEAPSVIWHLDALLPMTDFVSVGTNDLMQYLFAADRGNPRVADRYDPLSPPA CCCCCCHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHH LRALETIQRACAETGTPVSVCGEMAGRPLEAFTLVALGFERLSMPPAGIGPVKQMVLSCD HHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCC REAARRGVSALLKSGAGSVRNEIETLARKLYLAV HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503; 7896715; 8973315 [H]