| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is flp [H]
Identifier: 197104221
GI number: 197104221
Start: 830671
End: 832170
Strand: Reverse
Name: flp [H]
Synonym: PHZ_c0755
Alternate gene names: 197104221
Gene position: 832170-830671 (Counterclockwise)
Preceding gene: 197104223
Following gene: 197104219
Centisome position: 20.82
GC content: 72.07
Gene sequence:
>1500_bases ATGAAGTTCGCAAGCTGTGCGGCGGCGCTGGCCGCGTTCTGCCTGGCCGGGTTCGGCCTGATCGGGCCGGTGGCGGCGCA GACGGGGGACCAGAAGGCCGCCTTCGCCGAGATCGACCCGCTATTCGAGGCCTTCATGCGCGAGCAGAACGTCCCCGGCC TCGTCTATGGCGTCGTGGCCGACGGCAAGCTGGCCTACGTCCGGACCCTGGGCGTGCAGGACGTGGAGACGAAGGCGCCG GTCACGGCCGACACCGTCTTCCGCATCGCCTCGATGTCCAAGAACTTCACCGCGCTGGCGGCGCTGAAGCTCAGGGACGA GGGCCGGCTGTCGCTGGACGCCCCCGCCGAGCAGTACGTGCCGGAGCTGAAGGCGCTGAAGTATCCCACGACGGACAGCC CGAAGATCACCGTCCGCGACCTTCTCAGCCACGCCGGCGGCTTCGTCACCGACGACCCCTGGGGCGACCGCCATCTCGAC ATGGCGGAGCCGGACTTCTCGCGCTTCGTCGCGGCGGGCGTCCCGTTCTCGCGAGCGCCCGGGACGGCGTTCGAATATTC CAACTTCGGCTATGCGCTCGCCGGCCGGGTGGTCTCGAACGCCTCGGGGACGCCCTACGCCGACTACATCGGCGCCCGCT TCCTCGCGCCGCTGGGCATGGCCTCGACCACGTTCGACATCGGCAAGGTCCCGGCCGGGCGCCTCGCCCGCGGCTATCGG TGGGAGGACGGGCGCTGGACGCCCGAGCCGGCGCCGGGTCCCGGCGCCTTCGGGGCGATGGGCGGGCTCCTGACCAGCGC TAACGACTACGCCCGCTACATGGCCTGGGAGCTCGCCGCCTGGCCGCCGCGCGATGGGCCCGAGGACGGGATCCTGGCCC GCGCCAGCATCCGCGAGATCGCCCGTCCCCAGACCTACGCCACCGTGCAGCGGCGGTCCGATCCCGAGGGCTGCGACCGG GCGGCCAGCTACGGCATGGGGACCATCCCCTACAGCGACTGCGTGCTCGGGCCGCACTTCGGCCATTCCGGCGGGCTGCC GGGCTACGGCTCGAACGTCCTGATGCTGCCGCAGCGCGGCGTGGGCGTGTTCGCCTTCACGAACCGGACCTATGCGCCCG CCTCCGTCGTCGTTCGCGAGGCGGCGACCCGGCTGGTGAAATCGGGGGCCTTCCCACAGCGCCAGGCGCCGCCCAGCGCG GCGGTGACGGCCATGGCCGAGCGGGCCATGCGGATCTATGCGGCCGGCGACGTGCTGGCCGAGCCCGACGCCCTGGCCGT CAACTTCCTGCTGGACGAGGACGCCGCCCACCGGAACGCGAAGATCGTCCCGATCAAGGAGAAGCTGGGCGCCTGTCGGG GCGAGCTGCAGCCGGTGCGGACCGACAGCGCCATGGCGGCGATCCTGAAGTTCCCGTGCGAGCGGGGAACGCTGGAGGTC CGCTTCCTCCTCGCGCCCACCACGCCCGCCAGCTTCCAGGCGCTGGAGTTCCGCGGCTAG
Upstream 100 bases:
>100_bases GGGATGAGCCCGCGGCGCGACCCTGGCAACCTTGCCCCGACGTAACTTGACGAGGCGGGCCCCTGTCGGCGCTTCTGCCG GTTCGGATGGGGGACGAGAG
Downstream 100 bases:
>100_bases GCGCTAGAGCGACACCCAGTTGCCGTGGAAGCCGAAGGGCACGCGCCGCGGCATGGCCGCCGTCGCGACCGGCCCCCTGG CGATGTCCTGCGCCTCGAAG
Product: beta-lactamase
Products: substituted beta-amino acid
Alternate protein names: FmtA-like protein [H]
Number of amino acids: Translated: 499; Mature: 499
Protein sequence:
>499_residues MKFASCAAALAAFCLAGFGLIGPVAAQTGDQKAAFAEIDPLFEAFMREQNVPGLVYGVVADGKLAYVRTLGVQDVETKAP VTADTVFRIASMSKNFTALAALKLRDEGRLSLDAPAEQYVPELKALKYPTTDSPKITVRDLLSHAGGFVTDDPWGDRHLD MAEPDFSRFVAAGVPFSRAPGTAFEYSNFGYALAGRVVSNASGTPYADYIGARFLAPLGMASTTFDIGKVPAGRLARGYR WEDGRWTPEPAPGPGAFGAMGGLLTSANDYARYMAWELAAWPPRDGPEDGILARASIREIARPQTYATVQRRSDPEGCDR AASYGMGTIPYSDCVLGPHFGHSGGLPGYGSNVLMLPQRGVGVFAFTNRTYAPASVVVREAATRLVKSGAFPQRQAPPSA AVTAMAERAMRIYAAGDVLAEPDALAVNFLLDEDAAHRNAKIVPIKEKLGACRGELQPVRTDSAMAAILKFPCERGTLEV RFLLAPTTPASFQALEFRG
Sequences:
>Translated_499_residues MKFASCAAALAAFCLAGFGLIGPVAAQTGDQKAAFAEIDPLFEAFMREQNVPGLVYGVVADGKLAYVRTLGVQDVETKAP VTADTVFRIASMSKNFTALAALKLRDEGRLSLDAPAEQYVPELKALKYPTTDSPKITVRDLLSHAGGFVTDDPWGDRHLD MAEPDFSRFVAAGVPFSRAPGTAFEYSNFGYALAGRVVSNASGTPYADYIGARFLAPLGMASTTFDIGKVPAGRLARGYR WEDGRWTPEPAPGPGAFGAMGGLLTSANDYARYMAWELAAWPPRDGPEDGILARASIREIARPQTYATVQRRSDPEGCDR AASYGMGTIPYSDCVLGPHFGHSGGLPGYGSNVLMLPQRGVGVFAFTNRTYAPASVVVREAATRLVKSGAFPQRQAPPSA AVTAMAERAMRIYAAGDVLAEPDALAVNFLLDEDAAHRNAKIVPIKEKLGACRGELQPVRTDSAMAAILKFPCERGTLEV RFLLAPTTPASFQALEFRG >Mature_499_residues MKFASCAAALAAFCLAGFGLIGPVAAQTGDQKAAFAEIDPLFEAFMREQNVPGLVYGVVADGKLAYVRTLGVQDVETKAP VTADTVFRIASMSKNFTALAALKLRDEGRLSLDAPAEQYVPELKALKYPTTDSPKITVRDLLSHAGGFVTDDPWGDRHLD MAEPDFSRFVAAGVPFSRAPGTAFEYSNFGYALAGRVVSNASGTPYADYIGARFLAPLGMASTTFDIGKVPAGRLARGYR WEDGRWTPEPAPGPGAFGAMGGLLTSANDYARYMAWELAAWPPRDGPEDGILARASIREIARPQTYATVQRRSDPEGCDR AASYGMGTIPYSDCVLGPHFGHSGGLPGYGSNVLMLPQRGVGVFAFTNRTYAPASVVVREAATRLVKSGAFPQRQAPPSA AVTAMAERAMRIYAAGDVLAEPDALAVNFLLDEDAAHRNAKIVPIKEKLGACRGELQPVRTDSAMAAILKFPCERGTLEV RFLLAPTTPASFQALEFRG
Specific function: Its precise function is unknown. Has no penicillin- binding activity and is not involved in methicillin resistance [H]
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI26051231, Length=108, Percent_Identity=40.7407407407407, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI26051233, Length=108, Percent_Identity=40.7407407407407, Blast_Score=82, Evalue=2e-15, Organism=Escherichia coli, GI1790593, Length=358, Percent_Identity=26.8156424581006, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI1786574, Length=331, Percent_Identity=25.3776435045317, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI87082101, Length=247, Percent_Identity=23.8866396761134, Blast_Score=66, Evalue=5e-12, Organism=Caenorhabditis elegans, GI115533026, Length=286, Percent_Identity=30.0699300699301, Blast_Score=104, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17550934, Length=343, Percent_Identity=27.1137026239067, Blast_Score=100, Evalue=3e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001466 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: 3.5.2.6
Molecular weight: Translated: 53233; Mature: 53233
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFASCAAALAAFCLAGFGLIGPVAAQTGDQKAAFAEIDPLFEAFMREQNVPGLVYGVVA CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEE DGKLAYVRTLGVQDVETKAPVTADTVFRIASMSKNFTALAALKLRDEGRLSLDAPAEQYV CCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCEEECCCHHHHH PELKALKYPTTDSPKITVRDLLSHAGGFVTDDPWGDRHLDMAEPDFSRFVAAGVPFSRAP HHHHHCCCCCCCCCCEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCC GTAFEYSNFGYALAGRVVSNASGTPYADYIGARFLAPLGMASTTFDIGKVPAGRLARGYR CCEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCEE WEDGRWTPEPAPGPGAFGAMGGLLTSANDYARYMAWELAAWPPRDGPEDGILARASIREI CCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHH ARPQTYATVQRRSDPEGCDRAASYGMGTIPYSDCVLGPHFGHSGGLPGYGSNVLMLPQRG HCCCHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC VGVFAFTNRTYAPASVVVREAATRLVKSGAFPQRQAPPSAAVTAMAERAMRIYAAGDVLA CEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHEEEECCCCCC EPDALAVNFLLDEDAAHRNAKIVPIKEKLGACRGELQPVRTDSAMAAILKFPCERGTLEV CCCCEEEEEEECCCCCCCCCEEEEHHHHHCCHHCCCCCCCCHHHHHHHHHCCCCCCCEEE RFLLAPTTPASFQALEFRG EEEEECCCCCCCCEEEECC >Mature Secondary Structure MKFASCAAALAAFCLAGFGLIGPVAAQTGDQKAAFAEIDPLFEAFMREQNVPGLVYGVVA CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEE DGKLAYVRTLGVQDVETKAPVTADTVFRIASMSKNFTALAALKLRDEGRLSLDAPAEQYV CCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCEEECCCHHHHH PELKALKYPTTDSPKITVRDLLSHAGGFVTDDPWGDRHLDMAEPDFSRFVAAGVPFSRAP HHHHHCCCCCCCCCCEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCC GTAFEYSNFGYALAGRVVSNASGTPYADYIGARFLAPLGMASTTFDIGKVPAGRLARGYR CCEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCEE WEDGRWTPEPAPGPGAFGAMGGLLTSANDYARYMAWELAAWPPRDGPEDGILARASIREI CCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHH ARPQTYATVQRRSDPEGCDRAASYGMGTIPYSDCVLGPHFGHSGGLPGYGSNVLMLPQRG HCCCHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC VGVFAFTNRTYAPASVVVREAATRLVKSGAFPQRQAPPSAAVTAMAERAMRIYAAGDVLA CEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHEEEECCCCCC EPDALAVNFLLDEDAAHRNAKIVPIKEKLGACRGELQPVRTDSAMAAILKFPCERGTLEV CCCCEEEEEEECCCCCCCCCEEEEHHHHHCCHHCCCCCCCCHHHHHHHHHCCCCCCCEEE RFLLAPTTPASFQALEFRG EEEEECCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: beta-lactam; H2O
Specific reaction: A beta-lactam + H2O = a substituted beta-amino acid
General reaction: Carboxylic acid amide hydrolysis [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA