| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is cya3 [H]
Identifier: 197104178
GI number: 197104178
Start: 781183
End: 782949
Strand: Reverse
Name: cya3 [H]
Synonym: PHZ_c0712
Alternate gene names: 197104178
Gene position: 782949-781183 (Counterclockwise)
Preceding gene: 197104180
Following gene: 197104176
Centisome position: 19.59
GC content: 74.19
Gene sequence:
>1767_bases GTGCGTCACGCCTCCAGGAGCCGGAAGGTCGAGCGGCGGCTGATGGCCATCCTGGCGGCCGACGCCGTCGGCTACAGCCG GCTCGTGTCCCTGGACGAGGAAGGCACGCTCGCGCGGTTCGCCGACCGCCTCGCAGGGGTGATGCGGCCCACGATCCAGA GCCACGGCGGGCGGATCATCAAGACCACCGGCGACGGGCTGCTCAGCGTCTTCCCGAGCGTCGTCTCGGCCGTGCAGTGC GCGCTCGCACTGCAGGGCGCCCTGGCCGAAGGCGAGGCGGGGGCGGCCGAGCCGCTGGCCTTCCGCATCGGCCTCCACGC CGCCGACGTGGTGATCGACGGCGAGGATGTGTTCGGCGACGGGGTCAATGTCGCCGCCCGCCTGGAGGCCCTGGCCGAGC CGGGCGGCATCTGCGCCTCGGCGCGGGTGCAGGAGGACGCCCAGGGCCGGCTGCCCGCCCACTTCGTCGACCTCGGGCTC CAGAAGCTGAAGAACATCCCCCGGCCGGTGCGGGCCTACCGCGTGCGGCCGGGCCTGGGCGCCGAGCCGCCGCAGTCCCT GCCGTTGCCCTCCAAGCCGTCGATCGTCGTGCTGCCGTTCGAGAACCGCGGCGGCGACCCGGCGCAGGAATACCTGGCCG ACGCCATCACCGAGGACATCATCACCGCCCTCTCCCGCTGGCGCTGGTTCTTCGTGATCGGGCGCAACACGAGCTTCGCC TACAAGGGCCGCACGGTGCAGGCGGCCCAGGTCGGCCACGATCTGGGGGTCCGCTACATCCTGCAGGGCGCGGTCCGGCG CCTGAACGACCGGCTGCGGCTGACCGCCGAACTCGTCGACGCGGCCACCGCCGCCAACCTCTGGACCGAGCGCTTCGACG GCGAGGTGAGCGATGTCCTCGCCCTGCAGGACCGGATGACGGAACAGCTGGTGGGCGCCCTCGAGCCGGCCATGCTGCAC ACCGAGGGCGCGCGGGCCGGCCGCAAGGACCTGGCCGACTTCGACGCCCTGGACTGCTTCCAGCGCGGCATGTGGCACCT CAACAAGGTGACCGAGGAGGGCTGCCGCACGGCCCTAGACCTGTTCGGCCAGGCGGTCGCCCGCGATCCCGAGCTGGCGC TGGGCCATGTCGGCCTGGCGCGGGCGCGCTACGGGCTGGCGGTGTACGGCTGGTCGCCGGATCCGAAGGCCGAGCTGCAG GCGGCCCGGGCGGCGGCGGCCGAGGCCATCCGGCTGGACCCGCGGGACGCCTACGGCCACTTCGCCGCCTCCGGCGCGGC GCTCTACCTGCACCGGCACCGCGAGGCGCTGGACGAGGCGAAGACCACCATCGCCCTCAACCCCAACTTCGCCCTCGGGC ATTTCCGGCTCGGCCAGGTGCTGCTCTACGCCGGTCGGCCGCAGGAGGCGATCGGCCCCCTGGAACGCAGCCTGCGCCAC AGCCCGTACGATCCGCAGCTGGGATCGATGCTGTCGGTGCTGGCGCTCGCCCACTTCCACGCCGGCGCCTACGCCGAGGC CGCCCGCCACGCCGAGGAGGCCGCCGAGCGCCTCGCCCCCCGCGCCCGGGCGATCCAGGCGGCGAGCCTCGTCAGGATGG GCTGGCTGGACCAGGCGCGCGCGGTCTTCCCTCCGGCGCTGCAGACCTTCGAGCAGGGGTGGAAGGGCCGCCTGGCGCCC TACGCCCGCGCCGCCGACCGGGAGGACCTGGTCTCGGCCCTACGCCTGGCCGGGGTCGGCGAGGACGTGCTCTCGGCCGT CGGCTAG
Upstream 100 bases:
>100_bases GCCGGCTCCGGCCCGGCCGGAGACCCGGTCGCAGGTACGGGCCAGTCGTGAGTATGGGCCAGTCGCGGGTATGGGAGCGT GGGCCGTGGAGGCCACCAGC
Downstream 100 bases:
>100_bases GGCCGCCGCTCGTTGGGCTTCGGCCGCGGGTCGACCGGATAGCGGCTCCTGAGCAGGACGGTGACGCCGCCGCGGGTCAG CTCGCCGTCGGCCGACTGCC
Product: adenylate cyclase
Products: NA
Alternate protein names: ATP pyrophosphate-lyase 3; Adenylyl cyclase 3 [H]
Number of amino acids: Translated: 588; Mature: 588
Protein sequence:
>588_residues MRHASRSRKVERRLMAILAADAVGYSRLVSLDEEGTLARFADRLAGVMRPTIQSHGGRIIKTTGDGLLSVFPSVVSAVQC ALALQGALAEGEAGAAEPLAFRIGLHAADVVIDGEDVFGDGVNVAARLEALAEPGGICASARVQEDAQGRLPAHFVDLGL QKLKNIPRPVRAYRVRPGLGAEPPQSLPLPSKPSIVVLPFENRGGDPAQEYLADAITEDIITALSRWRWFFVIGRNTSFA YKGRTVQAAQVGHDLGVRYILQGAVRRLNDRLRLTAELVDAATAANLWTERFDGEVSDVLALQDRMTEQLVGALEPAMLH TEGARAGRKDLADFDALDCFQRGMWHLNKVTEEGCRTALDLFGQAVARDPELALGHVGLARARYGLAVYGWSPDPKAELQ AARAAAAEAIRLDPRDAYGHFAASGAALYLHRHREALDEAKTTIALNPNFALGHFRLGQVLLYAGRPQEAIGPLERSLRH SPYDPQLGSMLSVLALAHFHAGAYAEAARHAEEAAERLAPRARAIQAASLVRMGWLDQARAVFPPALQTFEQGWKGRLAP YARAADREDLVSALRLAGVGEDVLSAVG
Sequences:
>Translated_588_residues MRHASRSRKVERRLMAILAADAVGYSRLVSLDEEGTLARFADRLAGVMRPTIQSHGGRIIKTTGDGLLSVFPSVVSAVQC ALALQGALAEGEAGAAEPLAFRIGLHAADVVIDGEDVFGDGVNVAARLEALAEPGGICASARVQEDAQGRLPAHFVDLGL QKLKNIPRPVRAYRVRPGLGAEPPQSLPLPSKPSIVVLPFENRGGDPAQEYLADAITEDIITALSRWRWFFVIGRNTSFA YKGRTVQAAQVGHDLGVRYILQGAVRRLNDRLRLTAELVDAATAANLWTERFDGEVSDVLALQDRMTEQLVGALEPAMLH TEGARAGRKDLADFDALDCFQRGMWHLNKVTEEGCRTALDLFGQAVARDPELALGHVGLARARYGLAVYGWSPDPKAELQ AARAAAAEAIRLDPRDAYGHFAASGAALYLHRHREALDEAKTTIALNPNFALGHFRLGQVLLYAGRPQEAIGPLERSLRH SPYDPQLGSMLSVLALAHFHAGAYAEAARHAEEAAERLAPRARAIQAASLVRMGWLDQARAVFPPALQTFEQGWKGRLAP YARAADREDLVSALRLAGVGEDVLSAVG >Mature_588_residues MRHASRSRKVERRLMAILAADAVGYSRLVSLDEEGTLARFADRLAGVMRPTIQSHGGRIIKTTGDGLLSVFPSVVSAVQC ALALQGALAEGEAGAAEPLAFRIGLHAADVVIDGEDVFGDGVNVAARLEALAEPGGICASARVQEDAQGRLPAHFVDLGL QKLKNIPRPVRAYRVRPGLGAEPPQSLPLPSKPSIVVLPFENRGGDPAQEYLADAITEDIITALSRWRWFFVIGRNTSFA YKGRTVQAAQVGHDLGVRYILQGAVRRLNDRLRLTAELVDAATAANLWTERFDGEVSDVLALQDRMTEQLVGALEPAMLH TEGARAGRKDLADFDALDCFQRGMWHLNKVTEEGCRTALDLFGQAVARDPELALGHVGLARARYGLAVYGWSPDPKAELQ AARAAAAEAIRLDPRDAYGHFAASGAALYLHRHREALDEAKTTIALNPNFALGHFRLGQVLLYAGRPQEAIGPLERSLRH SPYDPQLGSMLSVLALAHFHAGAYAEAARHAEEAAERLAPRARAIQAASLVRMGWLDQARAVFPPALQTFEQGWKGRLAP YARAADREDLVSALRLAGVGEDVLSAVG
Specific function: Unknown
COG id: COG5616
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 5 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR001440 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF00211 Guanylate_cyc; PF00515 TPR_1 [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 63425; Mature: 63425
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: PS50293 TPR_REGION ; PS50125 GUANYLATE_CYCLASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHASRSRKVERRLMAILAADAVGYSRLVSLDEEGTLARFADRLAGVMRPTIQSHGGRII CCCCHHHHHHHHHHHHHHHHHHHCHHHHEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEE KTTGDGLLSVFPSVVSAVQCALALQGALAEGEAGAAEPLAFRIGLHAADVVIDGEDVFGD EECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEEECCCHHCCC GVNVAARLEALAEPGGICASARVQEDAQGRLPAHFVDLGLQKLKNIPRPVRAYRVRPGLG CCHHHHHHHHHCCCCCCEEHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHEEECCCCC AEPPQSLPLPSKPSIVVLPFENRGGDPAQEYLADAITEDIITALSRWRWFFVIGRNTSFA CCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCEE YKGRTVQAAQVGHDLGVRYILQGAVRRLNDRLRLTAELVDAATAANLWTERFDGEVSDVL ECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH ALQDRMTEQLVGALEPAMLHTEGARAGRKDLADFDALDCFQRGMWHLNKVTEEGCRTALD HHHHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFGQAVARDPELALGHVGLARARYGLAVYGWSPDPKAELQAARAAAAEAIRLDPRDAYGH HHHHHHHCCCCHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHCH FAASGAALYLHRHREALDEAKTTIALNPNFALGHFRLGQVLLYAGRPQEAIGPLERSLRH HHCCCHHHHHHHHHHHHHHHCCEEEECCCCEECHHHHCCEEEECCCCHHHHHHHHHHHCC SPYDPQLGSMLSVLALAHFHAGAYAEAARHAEEAAERLAPRARAIQAASLVRMGWLDQAR CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH AVFPPALQTFEQGWKGRLAPYARAADREDLVSALRLAGVGEDVLSAVG HHCCHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHCCCHHHHHHCC >Mature Secondary Structure MRHASRSRKVERRLMAILAADAVGYSRLVSLDEEGTLARFADRLAGVMRPTIQSHGGRII CCCCHHHHHHHHHHHHHHHHHHHCHHHHEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEE KTTGDGLLSVFPSVVSAVQCALALQGALAEGEAGAAEPLAFRIGLHAADVVIDGEDVFGD EECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEEECCCHHCCC GVNVAARLEALAEPGGICASARVQEDAQGRLPAHFVDLGLQKLKNIPRPVRAYRVRPGLG CCHHHHHHHHHCCCCCCEEHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHEEECCCCC AEPPQSLPLPSKPSIVVLPFENRGGDPAQEYLADAITEDIITALSRWRWFFVIGRNTSFA CCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCEE YKGRTVQAAQVGHDLGVRYILQGAVRRLNDRLRLTAELVDAATAANLWTERFDGEVSDVL ECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH ALQDRMTEQLVGALEPAMLHTEGARAGRKDLADFDALDCFQRGMWHLNKVTEEGCRTALD HHHHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFGQAVARDPELALGHVGLARARYGLAVYGWSPDPKAELQAARAAAAEAIRLDPRDAYGH HHHHHHHCCCCHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHCH FAASGAALYLHRHREALDEAKTTIALNPNFALGHFRLGQVLLYAGRPQEAIGPLERSLRH HHCCCHHHHHHHHHHHHHHHCCEEEECCCCEECHHHHCCEEEECCCCHHHHHHHHHHHCC SPYDPQLGSMLSVLALAHFHAGAYAEAARHAEEAAERLAPRARAIQAASLVRMGWLDQAR CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH AVFPPALQTFEQGWKGRLAPYARAADREDLVSALRLAGVGEDVLSAVG HHCCHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10485295; 11481432 [H]