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The map label for this gene is 197104176

Identifier: 197104176

GI number: 197104176

Start: 776754

End: 779306

Strand: Reverse

Name: 197104176

Synonym: PHZ_c0710

Alternate gene names: NA

Gene position: 779306-776754 (Counterclockwise)

Preceding gene: 197104178

Following gene: 197104175

Centisome position: 19.5

GC content: 74.85

Gene sequence:

>2553_bases
ATGAGCGACCGTCCGTCGGGCGTTGCGCCGCCGCGGCTGGTCGCGGTGCTCGGCCCCACCAACACCGGCAAGACCCACCT
GGCGGTCGAGCGGATGCTCGGCCACCAGTCCGGCATGATCGGCCTGCCGCTGCGGCTGCTGGCCCGCGAGGTCTACGACC
GGATCGTCAAGCTTAGGGGCGCCCGCGCCGTCGCCCTGATCACCGGCGAGGAGAAGATCGTCCCGCCGCGGCCGCAGTAT
TTCGTCTGCACCGTCGAGGCGATGCCGCTGTCCGTCGAGGTCGAGTTCCTGGCGGTGGACGAGATCCAGCTCTGCGCCGA
CCCCGAGCGCGGGCACGTCTTCACCCACCGCCTGCTGCACGCGCGCGGCGCCCGCGAGACCATGCTGCTGGGCGCCGGGA
CGATGGCCCCGCTGGTCCGCCGCCTGCTGCCGCACGCCGAGATCCAGACCCGCGAGCGGCTCAGCGCGCTGACCTACGCC
GGGCCAAAGAAGCTGACCCGCCTGCCACGGCGCAGCGCCGTGGTGGCCTTCAGCGCCGACCAGGTCTACGCCATCGCCGA
GCTGATCCGCCGCCAGCGCGGCGGCGCGGCCGTGGTGATGGGATCGCTGTCGCCGCGCACCCGCAACGCCCAGGTCGCCC
TCTACCAGTCCGGCGAGGTGGACTTCCTCGTCGCCACCGACGCGATCGGCATGGGCCTGAACATGGACGTCGACCACGTG
GCCTTCGCGGGCCTGCGCAAGTTCGACGGGCAGCGCGCGCGCCTCCTGCATCCCCAGGAGATCGGCCAGATCGCCGGCCG
CGCCGGCCGCTTTCAGAAGAACGGCACGTTCGGGGTCACCGGCGAGGCCGAGGACATGGACGCCGACCTGATCGAGGCGG
TGGAGAACCATCACTTCGAACCGGTCGCCGGGGCGGAATGGCGCAACTCGAAGCTCGACTTCACCAGCCTGCCCGCCCTG
ATGCGCTCGCTGGCCCAGACGCCCGAGCGCGAGGGCCTGAAGCTCGCCAAGGAGGCGCTGGACGAGACCACCCTGCGCCA
GCTCGCCGACGACCCCGACGTCGCCCGCCGCGCCCGCGACCGCCACAACCTCATGCGCCTGTGGGACGTCTGCCAGACGC
CGGACTTCCGCAAGGTGGCCTCCGAGGAGCACATGCGGTTGGTGAAGGACTTCTTCTTCCAGCTCACCGCCGGCCGGCGG
CGGCTCTCAGAGGACTGGATCGCGCGCCAGTACGCCCACCTCGACCGCACGGACGGCGAGATCGACATGCTGTCGAGCCG
TCTCGCGAGCGTCCGCACCCTGGCCTACGTGGCCAACCGGCCGGACTGGCTGGCCGACGCCGGCGCCTGGCAGGCGAAGA
CCCGCGCCCTCGAGGACCGCCTGTCCGACACCCTGCACGAGAAGCTGATGGCCCGGTTCGTGGACCGGCGGACCAGCGCC
CTGATGCGCGGCCTGCGGGTGCGCGAGGAGATGCTGGCCGGCGTGGCGGCCGACGGCTCGGTGACGGTCGAGGGCCATTT
CGTCGGCAGGCTCTCCGGCGTGCAGTTCGAGGCCGCGCAGGGCCAGAGCGTGCTCGAAACCAAGGCGCTGCGCGCCGCCG
CCCACCACGCGGTCGGGCCCGAGATCGCCAAGCGCCTCGGCCGGCTGGCCGGCGAGCCCGACGAGGCGTTCCGGCTCTCC
CCCGACGGGACCGTGCTGTGGCAGGGCGAGGCCGCCGGCGTCGTCACGGGCGGCGCGCCCTTCAGCCCGCGCGTGCGCCT
GCTGGGCGAGCTGGGCCACGACGCGGCCCGCCAGCGCGCCCAGCGGCGGCTGGAGGCCTTCGTGGCGGCCGAGGCGGCCC
GGCGGCTCTCGCCCCTGCGCAAGCTGGAGGTCGCCGTCGCCGAGGGGAAGATCCGGGGCCTGGCCCGCGGCCTCGCCTAC
CGGCTGATCGAGGCCGGCGGCGTCCTGGACCGGGCCGAGGTCCGCCAGGACGTGGGAGCCCTGTCCCAGGTGGAGCGGCG
CGTCCTGCGCGGCCTGGGCGTGCGGATCGGGGCGTTCTCCCTCTACATGCCTGGCCTGCTGCAGCCCGAGGCCCGGGCGC
TGGCCCAGGCGATCGCCTCGCGCGAGACGCCCGGCTGGACCCCGGCGAGCGACGCCGTCAGCCGGCTGCCGCAGGACCAG
GTCTCTCCGCGCGCGCTCTCCGCCTACGGGCTGAGGGCGGTGCGCGGCCTGGCGGTGCCCGTCGCGCAGCTTGAGCGCCT
GGACGAGCTGATGCGCGAGGCGGGCCAGGCGGCCGGCGCCTCCGTGCTGACCGAGGCCGCCCGCGAGGCCCTCGGCTGGA
GCAAGGCCGAGGCCGACGCCATCCTGCGGGGCCTGGGCTTCGCCCCCGCGCGCAAGCCCAGGGCGGGCGAGCCCACCGCC
TGGCGTCGCCGCAGCGCGGCCAAGGCCGAGAAGGCGGCGGCCGCGCCCGTCCATTCGCCGTTCGCGGCGCTGGCCGCGTT
GAAGGACCAGCCGCCACCGGCCCGCCGCAGCCGCCGGTCGCGGCGCCGCAAGCCCAAGGCCGCGGCCCTATGA

Upstream 100 bases:

>100_bases
AGTTCAAGGCGTTGCCCGGTCGTGAGCGCAGGCCTGCACCTCGCAAGACCAGGGCAAGGCGATGCTTGCCCGACTCCCCT
CCACAACCCACCTTAGGCCC

Downstream 100 bases:

>100_bases
GCGACGAGACCGCCTGCCGCGCCGACGTCTGGCTCTGGCGCGCCCGCTTCTTCAAGACCCGCTCGCTGGCGGCGAAGTTC
GTGGACGAGGGTCGCGTCCG

Product: superfamily II DNA and RNA helicase

Products: NA

Alternate protein names: Helicase Domain Protein; Helicase; Helicase-Like; Helicase Conserved C-Terminal Domain Protein; ATP-Dependent Helicase; ATP-Dependent RNA Helicase; ATP-Dependent DNA Helicase; ATP-Dependent DNA Helicase Protein; Superfamily II RNA Helicase; MgpS ATP-Dependent Helicase; RNA Helicase; Superfamily II DNA/RNA Helicase; Helicase-Like Protein; Superfamily II DNA And RNA Helicase; ATP-Dependent RNA And DNA Helicase; ATP Dependent RNA Helicase; Adenosinetriphosphatase; RNA Helicase RhrA; ATP-Dependent Helicase MgpS; ATP-Dependent RNA Helicase Superfamily II; Helicase C-Terminal Domain Protein; DEAD/DEAH Box Helicase Domain-Containing Protein; DNA Helicase; ATP-Dependent DNA And RNA Helicase Protein

Number of amino acids: Translated: 850; Mature: 849

Protein sequence:

>850_residues
MSDRPSGVAPPRLVAVLGPTNTGKTHLAVERMLGHQSGMIGLPLRLLAREVYDRIVKLRGARAVALITGEEKIVPPRPQY
FVCTVEAMPLSVEVEFLAVDEIQLCADPERGHVFTHRLLHARGARETMLLGAGTMAPLVRRLLPHAEIQTRERLSALTYA
GPKKLTRLPRRSAVVAFSADQVYAIAELIRRQRGGAAVVMGSLSPRTRNAQVALYQSGEVDFLVATDAIGMGLNMDVDHV
AFAGLRKFDGQRARLLHPQEIGQIAGRAGRFQKNGTFGVTGEAEDMDADLIEAVENHHFEPVAGAEWRNSKLDFTSLPAL
MRSLAQTPEREGLKLAKEALDETTLRQLADDPDVARRARDRHNLMRLWDVCQTPDFRKVASEEHMRLVKDFFFQLTAGRR
RLSEDWIARQYAHLDRTDGEIDMLSSRLASVRTLAYVANRPDWLADAGAWQAKTRALEDRLSDTLHEKLMARFVDRRTSA
LMRGLRVREEMLAGVAADGSVTVEGHFVGRLSGVQFEAAQGQSVLETKALRAAAHHAVGPEIAKRLGRLAGEPDEAFRLS
PDGTVLWQGEAAGVVTGGAPFSPRVRLLGELGHDAARQRAQRRLEAFVAAEAARRLSPLRKLEVAVAEGKIRGLARGLAY
RLIEAGGVLDRAEVRQDVGALSQVERRVLRGLGVRIGAFSLYMPGLLQPEARALAQAIASRETPGWTPASDAVSRLPQDQ
VSPRALSAYGLRAVRGLAVPVAQLERLDELMREAGQAAGASVLTEAAREALGWSKAEADAILRGLGFAPARKPRAGEPTA
WRRRSAAKAEKAAAAPVHSPFAALAALKDQPPPARRSRRSRRRKPKAAAL

Sequences:

>Translated_850_residues
MSDRPSGVAPPRLVAVLGPTNTGKTHLAVERMLGHQSGMIGLPLRLLAREVYDRIVKLRGARAVALITGEEKIVPPRPQY
FVCTVEAMPLSVEVEFLAVDEIQLCADPERGHVFTHRLLHARGARETMLLGAGTMAPLVRRLLPHAEIQTRERLSALTYA
GPKKLTRLPRRSAVVAFSADQVYAIAELIRRQRGGAAVVMGSLSPRTRNAQVALYQSGEVDFLVATDAIGMGLNMDVDHV
AFAGLRKFDGQRARLLHPQEIGQIAGRAGRFQKNGTFGVTGEAEDMDADLIEAVENHHFEPVAGAEWRNSKLDFTSLPAL
MRSLAQTPEREGLKLAKEALDETTLRQLADDPDVARRARDRHNLMRLWDVCQTPDFRKVASEEHMRLVKDFFFQLTAGRR
RLSEDWIARQYAHLDRTDGEIDMLSSRLASVRTLAYVANRPDWLADAGAWQAKTRALEDRLSDTLHEKLMARFVDRRTSA
LMRGLRVREEMLAGVAADGSVTVEGHFVGRLSGVQFEAAQGQSVLETKALRAAAHHAVGPEIAKRLGRLAGEPDEAFRLS
PDGTVLWQGEAAGVVTGGAPFSPRVRLLGELGHDAARQRAQRRLEAFVAAEAARRLSPLRKLEVAVAEGKIRGLARGLAY
RLIEAGGVLDRAEVRQDVGALSQVERRVLRGLGVRIGAFSLYMPGLLQPEARALAQAIASRETPGWTPASDAVSRLPQDQ
VSPRALSAYGLRAVRGLAVPVAQLERLDELMREAGQAAGASVLTEAAREALGWSKAEADAILRGLGFAPARKPRAGEPTA
WRRRSAAKAEKAAAAPVHSPFAALAALKDQPPPARRSRRSRRRKPKAAAL
>Mature_849_residues
SDRPSGVAPPRLVAVLGPTNTGKTHLAVERMLGHQSGMIGLPLRLLAREVYDRIVKLRGARAVALITGEEKIVPPRPQYF
VCTVEAMPLSVEVEFLAVDEIQLCADPERGHVFTHRLLHARGARETMLLGAGTMAPLVRRLLPHAEIQTRERLSALTYAG
PKKLTRLPRRSAVVAFSADQVYAIAELIRRQRGGAAVVMGSLSPRTRNAQVALYQSGEVDFLVATDAIGMGLNMDVDHVA
FAGLRKFDGQRARLLHPQEIGQIAGRAGRFQKNGTFGVTGEAEDMDADLIEAVENHHFEPVAGAEWRNSKLDFTSLPALM
RSLAQTPEREGLKLAKEALDETTLRQLADDPDVARRARDRHNLMRLWDVCQTPDFRKVASEEHMRLVKDFFFQLTAGRRR
LSEDWIARQYAHLDRTDGEIDMLSSRLASVRTLAYVANRPDWLADAGAWQAKTRALEDRLSDTLHEKLMARFVDRRTSAL
MRGLRVREEMLAGVAADGSVTVEGHFVGRLSGVQFEAAQGQSVLETKALRAAAHHAVGPEIAKRLGRLAGEPDEAFRLSP
DGTVLWQGEAAGVVTGGAPFSPRVRLLGELGHDAARQRAQRRLEAFVAAEAARRLSPLRKLEVAVAEGKIRGLARGLAYR
LIEAGGVLDRAEVRQDVGALSQVERRVLRGLGVRIGAFSLYMPGLLQPEARALAQAIASRETPGWTPASDAVSRLPQDQV
SPRALSAYGLRAVRGLAVPVAQLERLDELMREAGQAAGASVLTEAAREALGWSKAEADAILRGLGFAPARKPRAGEPTAW
RRRSAAKAEKAAAAPVHSPFAALAALKDQPPPARRSRRSRRRKPKAAAL

Specific function: Unknown

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI31543667, Length=311, Percent_Identity=31.1897106109325, Blast_Score=129, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI115532784, Length=300, Percent_Identity=33, Blast_Score=125, Evalue=8e-29,
Organism=Caenorhabditis elegans, GI115532782, Length=300, Percent_Identity=33, Blast_Score=125, Evalue=8e-29,
Organism=Saccharomyces cerevisiae, GI6325228, Length=276, Percent_Identity=36.9565217391304, Blast_Score=147, Evalue=8e-36,
Organism=Drosophila melanogaster, GI221329989, Length=311, Percent_Identity=31.5112540192926, Blast_Score=122, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 92833; Mature: 92702

Theoretical pI: Translated: 10.81; Mature: 10.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDRPSGVAPPRLVAVLGPTNTGKTHLAVERMLGHQSGMIGLPLRLLAREVYDRIVKLRG
CCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCC
ARAVALITGEEKIVPPRPQYFVCTVEAMPLSVEVEFLAVDEIQLCADPERGHVFTHRLLH
CCEEEEEECCCCCCCCCCCEEEEEEEECCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHH
ARGARETMLLGAGTMAPLVRRLLPHAEIQTRERLSALTYAGPKKLTRLPRRSAVVAFSAD
HCCCCCEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEECCH
QVYAIAELIRRQRGGAAVVMGSLSPRTRNAQVALYQSGEVDFLVATDAIGMGLNMDVDHV
HHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCHHHH
AFAGLRKFDGQRARLLHPQEIGQIAGRAGRFQKNGTFGVTGEAEDMDADLIEAVENHHFE
HHHHHHHCCCCCHHCCCHHHHHHHHHCCCCCCCCCCEECCCCCCCCCHHHHHHHHCCCCC
PVAGAEWRNSKLDFTSLPALMRSLAQTPEREGLKLAKEALDETTLRQLADDPDVARRARD
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
RHNLMRLWDVCQTPDFRKVASEEHMRLVKDFFFQLTAGRRRLSEDWIARQYAHLDRTDGE
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
IDMLSSRLASVRTLAYVANRPDWLADAGAWQAKTRALEDRLSDTLHEKLMARFVDRRTSA
HHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMRGLRVREEMLAGVAADGSVTVEGHFVGRLSGVQFEAAQGQSVLETKALRAAAHHAVGP
HHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCEEECCCCCHHHHHHHHHHHHHHCCCH
EIAKRLGRLAGEPDEAFRLSPDGTVLWQGEAAGVVTGGAPFSPRVRLLGELGHDAARQRA
HHHHHHHHHCCCCCCCEEECCCCEEEECCCCCEEEECCCCCCHHHHHHHHHCHHHHHHHH
QRRLEAFVAAEAARRLSPLRKLEVAVAEGKIRGLARGLAYRLIEAGGVLDRAEVRQDVGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LSQVERRVLRGLGVRIGAFSLYMPGLLQPEARALAQAIASRETPGWTPASDAVSRLPQDQ
HHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCC
VSPRALSAYGLRAVRGLAVPVAQLERLDELMREAGQAAGASVLTEAAREALGWSKAEADA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHH
ILRGLGFAPARKPRAGEPTAWRRRSAAKAEKAAAAPVHSPFAALAALKDQPPPARRSRRS
HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHH
RRRKPKAAAL
HHCCCCCCCC
>Mature Secondary Structure 
SDRPSGVAPPRLVAVLGPTNTGKTHLAVERMLGHQSGMIGLPLRLLAREVYDRIVKLRG
CCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCC
ARAVALITGEEKIVPPRPQYFVCTVEAMPLSVEVEFLAVDEIQLCADPERGHVFTHRLLH
CCEEEEEECCCCCCCCCCCEEEEEEEECCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHH
ARGARETMLLGAGTMAPLVRRLLPHAEIQTRERLSALTYAGPKKLTRLPRRSAVVAFSAD
HCCCCCEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEECCH
QVYAIAELIRRQRGGAAVVMGSLSPRTRNAQVALYQSGEVDFLVATDAIGMGLNMDVDHV
HHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCHHHH
AFAGLRKFDGQRARLLHPQEIGQIAGRAGRFQKNGTFGVTGEAEDMDADLIEAVENHHFE
HHHHHHHCCCCCHHCCCHHHHHHHHHCCCCCCCCCCEECCCCCCCCCHHHHHHHHCCCCC
PVAGAEWRNSKLDFTSLPALMRSLAQTPEREGLKLAKEALDETTLRQLADDPDVARRARD
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
RHNLMRLWDVCQTPDFRKVASEEHMRLVKDFFFQLTAGRRRLSEDWIARQYAHLDRTDGE
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
IDMLSSRLASVRTLAYVANRPDWLADAGAWQAKTRALEDRLSDTLHEKLMARFVDRRTSA
HHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMRGLRVREEMLAGVAADGSVTVEGHFVGRLSGVQFEAAQGQSVLETKALRAAAHHAVGP
HHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCEEECCCCCHHHHHHHHHHHHHHCCCH
EIAKRLGRLAGEPDEAFRLSPDGTVLWQGEAAGVVTGGAPFSPRVRLLGELGHDAARQRA
HHHHHHHHHCCCCCCCEEECCCCEEEECCCCCEEEECCCCCCHHHHHHHHHCHHHHHHHH
QRRLEAFVAAEAARRLSPLRKLEVAVAEGKIRGLARGLAYRLIEAGGVLDRAEVRQDVGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LSQVERRVLRGLGVRIGAFSLYMPGLLQPEARALAQAIASRETPGWTPASDAVSRLPQDQ
HHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCC
VSPRALSAYGLRAVRGLAVPVAQLERLDELMREAGQAAGASVLTEAAREALGWSKAEADA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHH
ILRGLGFAPARKPRAGEPTAWRRRSAAKAEKAAAAPVHSPFAALAALKDQPPPARRSRRS
HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHH
RRRKPKAAAL
HHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA