| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104144
Identifier: 197104144
GI number: 197104144
Start: 736299
End: 737438
Strand: Reverse
Name: 197104144
Synonym: PHZ_c0678
Alternate gene names: NA
Gene position: 737438-736299 (Counterclockwise)
Preceding gene: 197104145
Following gene: 197104140
Centisome position: 18.45
GC content: 78.16
Gene sequence:
>1140_bases TTGATGACCACCACCCTGCATCCCTGCGACGTCGTGGTGATCGGCGGCGGCGTCGCGGGCGCGGCGATCGCCGCCTTCCT GGCCCCCTGGCGGCGCGTGGTGGTGCTGGAGCGGGAGGCGCCGGCGGGGCGTCACGCCACCGGCCGCTCGTCCGGCATGC TGCTGCCGTCCTACGGCGGCGAGGCCGCGCGGCCGCTGAGCCGGGCCAGCCTGCGGTTCTTCGCCGAGCCGCCCGGGATC TTCGGCGGCGACCTCCTGACCCCGCGCCCCACCCTGCACGTGGCCGGCCCCTCGCAGATCGCCGCCCTCGCCGCCCTGGC CGGCGAGCTGCCCGGCGCGCGCCTCTTCGGCCCCACCGAAGCGGCGCGCCGGGCGCCGCTGCTGCGGGCCGGGCGCCTGG CCGGCGCCCTGCTGGAGGCCGAGGGCGGCGACATCGACGTCGCCCGGCTGCACGCCGGCTTCCTGGCGGCCTGCCGCCGG TCGGGCGGGCAGGTCCACGTGGGCGTGGGGGACCTGACCTTCGCCCGCCGGGGCTCGGTCTGGCGGGTCTCCGCCGGCGG TGTCACCTGGGCCGCGCCGGTGATCGTCAACGCCGCCGGCGCCTGGGCCGACGAGGTCGCCCGCGCCGCCGGCGCGGCGG CGCTGGGCCTGCAGCCGAAGCGGCGGACGGTCCTGCTGTTTCCCAGACCGCCCGAGACCGCCGGCTGGCCGACGGTCAAG GACGTGGACGAGCGGTTCTACTTCCGCCCCTGCTCGAAGGCCCTGCTCTTCACCGCCTGCGACGAGACGCCGAGCCCGCC CTGCGACGCCCAGCCCGAGACGCTCGACGTGGCCCACGCGGCGGCGCTGTTCAGCCGCCTGTCGCGCCAGCCCGAGCCGC GCCCGATCCGCGCCTGGGCCGGCCTGAGGACCTTCGCCCCCGACCGCGCGCCGGTCATCGGCTGGTCCTCGACGCCGGGC TTCTTCTGGTTCGCCGGGCTCGGCGGCTTCGGCGTGCAGACGTCGCCGGCGGCCGGAAGCCTGGCCGCATCGCTGCTGCT GGGCCGGCGAATCCCGGGCGACCTGTTGGACGCGGGCGTCCGGCCCGAGCTCTACGCACCGACCAGGCTGACGAGCACGG GGGCCGCGCGGACCGCCTGA
Upstream 100 bases:
>100_bases CGCCGCCCGAACTGCGGGCCGCGCTCGCCGCGGCAGGGCCGCCCGGTCCGCTCGTCAACGGCTACGTCCACGGCGCGCGC GGCCTCGAGCTCCTGGACGC
Downstream 100 bases:
>100_bases CGCGGGGCGGCGCCCGCGGGCCGCCACAGGCGCGAAACCTCCTCGGCCACGCCGCCGGCCGCGGCGTCCGGCGATCGCCA GGCGAGGCCGAGGCTGGTCG
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: Glycine/D-Amino Acid Oxidase; Oxidoreductase; Amino Acid Oxidase; FAD-Dependent Oxidoreductase; Glycine Oxidase; FAD Dependent Oxidoreductase Family; Oxidase; FAD-Dependent Glycerol-3-Phosphate Dehydrogenase Protein; Fad Dependent Oxidoreductase
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MMTTTLHPCDVVVIGGGVAGAAIAAFLAPWRRVVVLEREAPAGRHATGRSSGMLLPSYGGEAARPLSRASLRFFAEPPGI FGGDLLTPRPTLHVAGPSQIAALAALAGELPGARLFGPTEAARRAPLLRAGRLAGALLEAEGGDIDVARLHAGFLAACRR SGGQVHVGVGDLTFARRGSVWRVSAGGVTWAAPVIVNAAGAWADEVARAAGAAALGLQPKRRTVLLFPRPPETAGWPTVK DVDERFYFRPCSKALLFTACDETPSPPCDAQPETLDVAHAAALFSRLSRQPEPRPIRAWAGLRTFAPDRAPVIGWSSTPG FFWFAGLGGFGVQTSPAAGSLAASLLLGRRIPGDLLDAGVRPELYAPTRLTSTGAARTA
Sequences:
>Translated_379_residues MMTTTLHPCDVVVIGGGVAGAAIAAFLAPWRRVVVLEREAPAGRHATGRSSGMLLPSYGGEAARPLSRASLRFFAEPPGI FGGDLLTPRPTLHVAGPSQIAALAALAGELPGARLFGPTEAARRAPLLRAGRLAGALLEAEGGDIDVARLHAGFLAACRR SGGQVHVGVGDLTFARRGSVWRVSAGGVTWAAPVIVNAAGAWADEVARAAGAAALGLQPKRRTVLLFPRPPETAGWPTVK DVDERFYFRPCSKALLFTACDETPSPPCDAQPETLDVAHAAALFSRLSRQPEPRPIRAWAGLRTFAPDRAPVIGWSSTPG FFWFAGLGGFGVQTSPAAGSLAASLLLGRRIPGDLLDAGVRPELYAPTRLTSTGAARTA >Mature_379_residues MMTTTLHPCDVVVIGGGVAGAAIAAFLAPWRRVVVLEREAPAGRHATGRSSGMLLPSYGGEAARPLSRASLRFFAEPPGI FGGDLLTPRPTLHVAGPSQIAALAALAGELPGARLFGPTEAARRAPLLRAGRLAGALLEAEGGDIDVARLHAGFLAACRR SGGQVHVGVGDLTFARRGSVWRVSAGGVTWAAPVIVNAAGAWADEVARAAGAAALGLQPKRRTVLLFPRPPETAGWPTVK DVDERFYFRPCSKALLFTACDETPSPPCDAQPETLDVAHAAALFSRLSRQPEPRPIRAWAGLRTFAPDRAPVIGWSSTPG FFWFAGLGGFGVQTSPAAGSLAASLLLGRRIPGDLLDAGVRPELYAPTRLTSTGAARTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39416; Mature: 39416
Theoretical pI: Translated: 10.87; Mature: 10.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTTTLHPCDVVVIGGGVAGAAIAAFLAPWRRVVVLEREAPAGRHATGRSSGMLLPSYGG CCCCCCCCCCEEEECCCHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCEEEECCCC EAARPLSRASLRFFAEPPGIFGGDLLTPRPTLHVAGPSQIAALAALAGELPGARLFGPTE HHHCCHHHHHEEEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCEEECCHH AARRAPLLRAGRLAGALLEAEGGDIDVARLHAGFLAACRRSGGQVHVGVGDLTFARRGSV HHHHCCHHHHHHHHHEEEECCCCCEEHHHHHHHHHHHHHHCCCEEEEECCCEEEECCCCE WRVSAGGVTWAAPVIVNAAGAWADEVARAAGAAALGLQPKRRTVLLFPRPPETAGWPTVK EEEECCCCEEECHHEEECCCCCHHHHHHHHCCHHCCCCCCCCEEEEECCCCCCCCCCCHH DVDERFYFRPCSKALLFTACDETPSPPCDAQPETLDVAHAAALFSRLSRQPEPRPIRAWA HHHHHHEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHC GLRTFAPDRAPVIGWSSTPGFFWFAGLGGFGVQTSPAAGSLAASLLLGRRIPGDLLDAGV CCHHCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHCCC RPELYAPTRLTSTGAARTA CCCEECCCEECCCCCCCCC >Mature Secondary Structure MMTTTLHPCDVVVIGGGVAGAAIAAFLAPWRRVVVLEREAPAGRHATGRSSGMLLPSYGG CCCCCCCCCCEEEECCCHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCEEEECCCC EAARPLSRASLRFFAEPPGIFGGDLLTPRPTLHVAGPSQIAALAALAGELPGARLFGPTE HHHCCHHHHHEEEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCEEECCHH AARRAPLLRAGRLAGALLEAEGGDIDVARLHAGFLAACRRSGGQVHVGVGDLTFARRGSV HHHHCCHHHHHHHHHEEEECCCCCEEHHHHHHHHHHHHHHCCCEEEEECCCEEEECCCCE WRVSAGGVTWAAPVIVNAAGAWADEVARAAGAAALGLQPKRRTVLLFPRPPETAGWPTVK EEEECCCCEEECHHEEECCCCCHHHHHHHHCCHHCCCCCCCCEEEEECCCCCCCCCCCHH DVDERFYFRPCSKALLFTACDETPSPPCDAQPETLDVAHAAALFSRLSRQPEPRPIRAWA HHHHHHEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHC GLRTFAPDRAPVIGWSSTPGFFWFAGLGGFGVQTSPAAGSLAASLLLGRRIPGDLLDAGV CCHHCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHCCC RPELYAPTRLTSTGAARTA CCCEECCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA