| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
Click here to switch to the map view.
The map label for this gene is osmY
Identifier: 197104115
GI number: 197104115
Start: 697257
End: 698015
Strand: Reverse
Name: osmY
Synonym: PHZ_c0649
Alternate gene names: NA
Gene position: 698015-697257 (Counterclockwise)
Preceding gene: 197104130
Following gene: 197104114
Centisome position: 17.47
GC content: 74.04
Gene sequence:
>759_bases ATGGCTCGTCGTGCGGAGACAGAGTTCGGCCTGAAACGCAGGAGGCCCGCCTTGACCAGCACCGAGACCGCCAGCCCGCC TGAACTCGCCCGGCGCATCGAGATCACCCGCGCCACGCTTCGCCGCGCCGTCCCGCCGGCCGACCTGCGCCTGGACCGCC TGGCGTTCGAGCCCGACGGCGTCCTCGTCGTGGAGGGCGAGGCCCGCACCGTCGCCGCCAAGAAGAAGACGTTGCGGCTG GCGGCCATCGCCTCGAACGCGCCGGGGCTGATCGACCGGCTGCACGTGCGTCCGGCGCTGCCGATGTCGGACGACGAGAT CCGCGACCGGGTGCTCGAGCTGCTGCGCCTCGATCCGCGCTTCTCGGACCTTGCGGTCGTGCCGGGCGCGCCGGACGCCG GCCTGGGCGTCGCCGTGCAGGACGGCGTCGTGACCCTGGACGGCGCGGTCCCCAGCCTGGTGCGCAAGCGCCTGGCGGGC GCCATCGCCTGGCGGGTCGCGGGCGTCCGCGACGTGGTCGACGGCCTGGCGGTCGAGCCGCCCGAGGAGGACGGTCCCGA CGAGCTGGAGGAGGCGGTGCGCGCCGCCCTCGACGGCCACCCCCTGTTCGACGACACCCAGGTGAAGGTCGGCGTGTTCG GCGACGCCGTGCGGCTGACCGGCAAGGTCCGTTCGAAGGACGCCCGCGACGCGGCCGAGGAGGAAGCCTGGCGCATCCTC GGCGTGGACGACGTCATCAACGAGATCGAGGCGCCCTGA
Upstream 100 bases:
>100_bases GCAGCGGCCTGTAACGGCCAAGCTACGGGTCCGTGACGAGTCTCTGACGGCCGCCGGCGCTTGATCGGCGTCAAGGCCGG TCCGCCGTCTCGCGCGTTTC
Downstream 100 bases:
>100_bases CGCGCCGCGCCGGTCCGAGGGGACGCCCATGACCGACCCGCCGCCCGTCCGGCCCGACCCGGCCGCCAGCCCGCTGCTCA CCGACCTCTACCAGCTCAAC
Product: hyperosmotically inducible periplasmic protein, RpoS-dependent stationary phase gene
Products: NA
Alternate protein names: Periplasmic Or Secreted Lipoprotein
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MARRAETEFGLKRRRPALTSTETASPPELARRIEITRATLRRAVPPADLRLDRLAFEPDGVLVVEGEARTVAAKKKTLRL AAIASNAPGLIDRLHVRPALPMSDDEIRDRVLELLRLDPRFSDLAVVPGAPDAGLGVAVQDGVVTLDGAVPSLVRKRLAG AIAWRVAGVRDVVDGLAVEPPEEDGPDELEEAVRAALDGHPLFDDTQVKVGVFGDAVRLTGKVRSKDARDAAEEEAWRIL GVDDVINEIEAP
Sequences:
>Translated_252_residues MARRAETEFGLKRRRPALTSTETASPPELARRIEITRATLRRAVPPADLRLDRLAFEPDGVLVVEGEARTVAAKKKTLRL AAIASNAPGLIDRLHVRPALPMSDDEIRDRVLELLRLDPRFSDLAVVPGAPDAGLGVAVQDGVVTLDGAVPSLVRKRLAG AIAWRVAGVRDVVDGLAVEPPEEDGPDELEEAVRAALDGHPLFDDTQVKVGVFGDAVRLTGKVRSKDARDAAEEEAWRIL GVDDVINEIEAP >Mature_251_residues ARRAETEFGLKRRRPALTSTETASPPELARRIEITRATLRRAVPPADLRLDRLAFEPDGVLVVEGEARTVAAKKKTLRLA AIASNAPGLIDRLHVRPALPMSDDEIRDRVLELLRLDPRFSDLAVVPGAPDAGLGVAVQDGVVTLDGAVPSLVRKRLAGA IAWRVAGVRDVVDGLAVEPPEEDGPDELEEAVRAALDGHPLFDDTQVKVGVFGDAVRLTGKVRSKDARDAAEEEAWRILG VDDVINEIEAP
Specific function: Unknown
COG id: COG2823
COG function: function code R; Predicted periplasmic or secreted lipoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27194; Mature: 27063
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: PS50914 BON
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARRAETEFGLKRRRPALTSTETASPPELARRIEITRATLRRAVPPADLRLDRLAFEPDG CCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHEEECCCC VLVVEGEARTVAAKKKTLRLAAIASNAPGLIDRLHVRPALPMSDDEIRDRVLELLRLDPR EEEECCCCHHHHHHHHHEEEEEECCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC FSDLAVVPGAPDAGLGVAVQDGVVTLDGAVPSLVRKRLAGAIAWRVAGVRDVVDGLAVEP CCCEEEECCCCCCCCCEEEECCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PEEDGPDELEEAVRAALDGHPLFDDTQVKVGVFGDAVRLTGKVRSKDARDAAEEEAWRIL CCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEECCHHCCCHHHHHHHHHEEEE GVDDVINEIEAP CHHHHHHHHCCC >Mature Secondary Structure ARRAETEFGLKRRRPALTSTETASPPELARRIEITRATLRRAVPPADLRLDRLAFEPDG CCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHEEECCCC VLVVEGEARTVAAKKKTLRLAAIASNAPGLIDRLHVRPALPMSDDEIRDRVLELLRLDPR EEEECCCCHHHHHHHHHEEEEEECCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC FSDLAVVPGAPDAGLGVAVQDGVVTLDGAVPSLVRKRLAGAIAWRVAGVRDVVDGLAVEP CCCEEEECCCCCCCCCEEEECCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PEEDGPDELEEAVRAALDGHPLFDDTQVKVGVFGDAVRLTGKVRSKDARDAAEEEAWRIL CCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEECCHHCCCHHHHHHHHHEEEE GVDDVINEIEAP CHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA