| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is pncB2 [H]
Identifier: 197104114
GI number: 197104114
Start: 695852
End: 697228
Strand: Reverse
Name: pncB2 [H]
Synonym: PHZ_c0648
Alternate gene names: 197104114
Gene position: 697228-695852 (Counterclockwise)
Preceding gene: 197104115
Following gene: 197104113
Centisome position: 17.45
GC content: 74.29
Gene sequence:
>1377_bases ATGACCGACCCGCCGCCCGTCCGGCCCGACCCGGCCGCCAGCCCGCTGCTCACCGACCTCTACCAGCTCAACATGCTGGA GGCCTATCTCGACCACGGGTTCACCGAGCCGGCGGTGTTCGAGTTCTTTGTCCGCCGGCTGCCGCCCTCCCGGGGCTTCC TGATGGCCGCGGGACTGGAGCAGGCCCTCGGCTTCCTGGAGGCCCTGGCCCCCTCGCCCGCCGAGCTCGACTGGCTGGAG CGATCGGGCCGCTTCAGCCGCCGGGTGCTGGACTGGTTCGCCGAGCTGCGCTTCAGCGGCGACGTGGACGCCATGCCGGA AGGCGCGGTGTTCTTCCGCGACGAGCCGATCCTGCGGGTGGTCGCGCCCCTGCCGGTCGCCCAACTGGTCGAGACCCGGC TGATCAACATCCTGCACTTCCAGTCGCTGGTCGCCTCCAAGGCGGCGCGGATGGTGCTGGCCGCGCCCGGCCGCACGCTG GTGGACTTCGGCCTGCGGCGCGCCCATGGCTCGGAGGCCGGCCTCTTCGCCGCCCGCGCCAGCTACCTCGCCGGCTTCAC CGGCACCGCCACGACGCTGGCGGGGATGCTGTGGGACATCCCCCTCTTCGGCACCATGGCCCATTCGTTCGTCCAGGCGT TCGAGGACGAGACGGCGGCCTTCGAGGCCTTCGCCCGCTCGCGTCCGGAGGGCCTCACCCTGCTGATCGACACCTACGAC ACCGAAGCGGCCGCGCGGAAGGTCGTGGCGCTGGCCCCGCGCCTCGCCGCCGCCGGCGTGAAGGTCCGGGGCGTGCGGCT GGACAGCGGCGACCTGCTGGCGCTGTCGCGCAGCGTCCGGGGGATCCTCGACGCGGGCGGCCTCTCCGACATCACCATCT TCGCCAGCGGCGGCCTGGACGAGGGCGACCTGCAGGCGCTCGTCCGCGCGGGGGCCCCGATCGACGGCTTCGGGGTGGGC ACCAGCCTGACCACCTCGTCCGACGCGCCCGGCCTCGACTGCGCCTACAAGCTCCAGGAATACGCCGGCGTCCCGCGCCG CAAGCTCTCGACCGGCAAGGCCACCTGGCCCGGCCGCAAGCAGGTCTGGCGCAGCGTCGACGCGCGCGGCCGGATGCGCG GCGACGTCGTCTCCACCCTGCACGACCGCCCGCTGGGCGAGCCCCTGCTGCAGCCTGTCATGCGTCAGGGACGGCGGACG GGGCCGCCGCCCTCGCTGCCCGAGATCCGCGCCCGCGCCGCCCGCGAGCTCGCCGCCCTGCCCGAGCCCCTCCGGGCGCT GGAGCCCCACGACTATCCGGTGCGGATCGCCGAGCCCCTGACGCGCCTCGCCGCCGAAGTGGACCGCCGGCTCGCCAAGC AGGTCCAGCCGTCATGA
Upstream 100 bases:
>100_bases GACGCGGCCGAGGAGGAAGCCTGGCGCATCCTCGGCGTGGACGACGTCATCAACGAGATCGAGGCGCCCTGACGCGCCGC GCCGGTCCGAGGGGACGCCC
Downstream 100 bases:
>100_bases TCCCCATCGCCCCCACCGACGCCCTGATCGTGATCGACGTGCAGAACGACTTCTGTCCCGGCGGTGCCCTGGCCGTGCCG CGCGGAGACGAGGTGGTCGC
Product: nicotinate phosphoribosyltransferase
Products: NA
Alternate protein names: NAPRTase pncB2 [H]
Number of amino acids: Translated: 458; Mature: 457
Protein sequence:
>458_residues MTDPPPVRPDPAASPLLTDLYQLNMLEAYLDHGFTEPAVFEFFVRRLPPSRGFLMAAGLEQALGFLEALAPSPAELDWLE RSGRFSRRVLDWFAELRFSGDVDAMPEGAVFFRDEPILRVVAPLPVAQLVETRLINILHFQSLVASKAARMVLAAPGRTL VDFGLRRAHGSEAGLFAARASYLAGFTGTATTLAGMLWDIPLFGTMAHSFVQAFEDETAAFEAFARSRPEGLTLLIDTYD TEAAARKVVALAPRLAAAGVKVRGVRLDSGDLLALSRSVRGILDAGGLSDITIFASGGLDEGDLQALVRAGAPIDGFGVG TSLTTSSDAPGLDCAYKLQEYAGVPRRKLSTGKATWPGRKQVWRSVDARGRMRGDVVSTLHDRPLGEPLLQPVMRQGRRT GPPPSLPEIRARAARELAALPEPLRALEPHDYPVRIAEPLTRLAAEVDRRLAKQVQPS
Sequences:
>Translated_458_residues MTDPPPVRPDPAASPLLTDLYQLNMLEAYLDHGFTEPAVFEFFVRRLPPSRGFLMAAGLEQALGFLEALAPSPAELDWLE RSGRFSRRVLDWFAELRFSGDVDAMPEGAVFFRDEPILRVVAPLPVAQLVETRLINILHFQSLVASKAARMVLAAPGRTL VDFGLRRAHGSEAGLFAARASYLAGFTGTATTLAGMLWDIPLFGTMAHSFVQAFEDETAAFEAFARSRPEGLTLLIDTYD TEAAARKVVALAPRLAAAGVKVRGVRLDSGDLLALSRSVRGILDAGGLSDITIFASGGLDEGDLQALVRAGAPIDGFGVG TSLTTSSDAPGLDCAYKLQEYAGVPRRKLSTGKATWPGRKQVWRSVDARGRMRGDVVSTLHDRPLGEPLLQPVMRQGRRT GPPPSLPEIRARAARELAALPEPLRALEPHDYPVRIAEPLTRLAAEVDRRLAKQVQPS >Mature_457_residues TDPPPVRPDPAASPLLTDLYQLNMLEAYLDHGFTEPAVFEFFVRRLPPSRGFLMAAGLEQALGFLEALAPSPAELDWLER SGRFSRRVLDWFAELRFSGDVDAMPEGAVFFRDEPILRVVAPLPVAQLVETRLINILHFQSLVASKAARMVLAAPGRTLV DFGLRRAHGSEAGLFAARASYLAGFTGTATTLAGMLWDIPLFGTMAHSFVQAFEDETAAFEAFARSRPEGLTLLIDTYDT EAAARKVVALAPRLAAAGVKVRGVRLDSGDLLALSRSVRGILDAGGLSDITIFASGGLDEGDLQALVRAGAPIDGFGVGT SLTTSSDAPGLDCAYKLQEYAGVPRRKLSTGKATWPGRKQVWRSVDARGRMRGDVVSTLHDRPLGEPLLQPVMRQGRRTG PPPSLPEIRARAARELAALPEPLRALEPHDYPVRIAEPLTRLAAEVDRRLAKQVQPS
Specific function: Catalyzes the conversion of nicotinic acid (NA) to NA mononucleotide (NaMN) [H]
COG id: COG1488
COG function: function code H; Nicotinic acid phosphoribosyltransferase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAPRTase family [H]
Homologues:
Organism=Homo sapiens, GI194394158, Length=535, Percent_Identity=33.2710280373832, Blast_Score=203, Evalue=3e-52, Organism=Caenorhabditis elegans, GI71997952, Length=525, Percent_Identity=30.0952380952381, Blast_Score=217, Evalue=1e-56, Organism=Caenorhabditis elegans, GI71997947, Length=525, Percent_Identity=30.0952380952381, Blast_Score=216, Evalue=1e-56, Organism=Caenorhabditis elegans, GI71997955, Length=217, Percent_Identity=39.1705069124424, Blast_Score=144, Evalue=1e-34, Organism=Drosophila melanogaster, GI24581587, Length=527, Percent_Identity=30.1707779886148, Blast_Score=206, Evalue=3e-53, Organism=Drosophila melanogaster, GI161076680, Length=299, Percent_Identity=31.1036789297659, Blast_Score=131, Evalue=1e-30, Organism=Drosophila melanogaster, GI24581595, Length=299, Percent_Identity=31.1036789297659, Blast_Score=131, Evalue=1e-30, Organism=Drosophila melanogaster, GI28574709, Length=299, Percent_Identity=31.1036789297659, Blast_Score=131, Evalue=1e-30, Organism=Drosophila melanogaster, GI24581593, Length=299, Percent_Identity=31.1036789297659, Blast_Score=131, Evalue=1e-30, Organism=Drosophila melanogaster, GI24581591, Length=299, Percent_Identity=31.1036789297659, Blast_Score=131, Evalue=1e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015977 - InterPro: IPR007229 - InterPro: IPR006405 - InterPro: IPR002638 [H]
Pfam domain/function: PF04095 NAPRTase [H]
EC number: =2.4.2.11 [H]
Molecular weight: Translated: 49587; Mature: 49456
Theoretical pI: Translated: 7.17; Mature: 7.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPPPVRPDPAASPLLTDLYQLNMLEAYLDHGFTEPAVFEFFVRRLPPSRGFLMAAGLE CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEHHHHH QALGFLEALAPSPAELDWLERSGRFSRRVLDWFAELRFSGDVDAMPEGAVFFRDEPILRV HHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCHHHH VAPLPVAQLVETRLINILHFQSLVASKAARMVLAAPGRTLVDFGLRRAHGSEAGLFAARA HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHCCCCCHHHHHHHH SYLAGFTGTATTLAGMLWDIPLFGTMAHSFVQAFEDETAAFEAFARSRPEGLTLLIDTYD HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC TEAAARKVVALAPRLAAAGVKVRGVRLDSGDLLALSRSVRGILDAGGLSDITIFASGGLD CHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCC EGDLQALVRAGAPIDGFGVGTSLTTSSDAPGLDCAYKLQEYAGVPRRKLSTGKATWPGRK HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHCCCCCCCCCCHH QVWRSVDARGRMRGDVVSTLHDRPLGEPLLQPVMRQGRRTGPPPSLPEIRARAARELAAL HHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC PEPLRALEPHDYPVRIAEPLTRLAAEVDRRLAKQVQPS CHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TDPPPVRPDPAASPLLTDLYQLNMLEAYLDHGFTEPAVFEFFVRRLPPSRGFLMAAGLE CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEHHHHH QALGFLEALAPSPAELDWLERSGRFSRRVLDWFAELRFSGDVDAMPEGAVFFRDEPILRV HHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCHHHH VAPLPVAQLVETRLINILHFQSLVASKAARMVLAAPGRTLVDFGLRRAHGSEAGLFAARA HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHCCCCCHHHHHHHH SYLAGFTGTATTLAGMLWDIPLFGTMAHSFVQAFEDETAAFEAFARSRPEGLTLLIDTYD HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC TEAAARKVVALAPRLAAAGVKVRGVRLDSGDLLALSRSVRGILDAGGLSDITIFASGGLD CHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCC EGDLQALVRAGAPIDGFGVGTSLTTSSDAPGLDCAYKLQEYAGVPRRKLSTGKATWPGRK HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHCCCCCCCCCCHH QVWRSVDARGRMRGDVVSTLHDRPLGEPLLQPVMRQGRRTGPPPSLPEIRARAARELAAL HHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC PEPLRALEPHDYPVRIAEPLTRLAAEVDRRLAKQVQPS CHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]