Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is 197104111

Identifier: 197104111

GI number: 197104111

Start: 693156

End: 694259

Strand: Direct

Name: 197104111

Synonym: PHZ_c0645

Alternate gene names: NA

Gene position: 693156-694259 (Clockwise)

Preceding gene: 197104109

Following gene: 197104116

Centisome position: 17.35

GC content: 74.91

Gene sequence:

>1104_bases
TTGCGCCGCGTCAAACCCCCGGCCGCGGCGATACCGGAAGGTGCAGGCGTGCCTGCCGACACAGAGACCCGCGCCGACCC
CGGCCTGGCCGCGAAGGTCGACTTCCTGAGCCGTCCGGCCGCCTATGCCGAGGGACCGGCGCAGGTGAGCCGGCGCGAGA
CCCACATGTCCTGGGTCTTCTTCCTGGACGGGACGGTCTACAAGCTGAAGAAGCCGGTCCGCTTCCCCTACCTCGACTTC
TCCACCCTCGCGCGGCGCGAGGCGGCCTGCCGCGCCGAGGTCGCGCTGAACCAGCGCCTGGCGCCGGGGATCTACCGCGG
CGTCGTCCCGCTGGTGCTGCGGGACGGCCGCCTGGCGCTGGGGGGCGAGGGGCCGGTGGTCGACTGGCTGGTGCGGATGG
ACAGGTTCGACCAGGCCCGCACGCTGGAGGCGCGGTTGCTGGCGGATGGGATCGCGGACGGCGAGGCCGACGCCCTGGCC
GACGCGCTGGCCAGGTTCTACCGCACCACGCGCCGGATCCCGACGCAGCCTGCGGCCTATCTGAAGCGCATCGGGGACGC
GCTGGCCTATCACCGCCGGGTGCTGCTGGAGCCCCGGCTGGGACTGCCGGCGGGACAGGTGCGCCATGTGCTGGCGGTGC
AGCACCGGTTCCTGCGGGTGCGGGGCGGCCTGCTCGCCGCGCGCGCCGGGCGGGGCCGCATCCTGGACGCCCACGGCGAC
CTGCGGCCCGAGCACATCTGGCTGGGGCCGCCGATCAAGATCATCGACCGGCTGGAGTTCAGCGCCGAGCTGCGCGCGGT
GGACCCGCTGGACGAGCTGGCCTTCCTGGACCTGGAGATGGAGCGCCTGGGCGCGGCGGCGGCGGGCGCCCGGGTCCGCC
GGCGGGCGGTCGCGCGGCTGGGCGAGCGGGCGGCGCCCGAGCTGCACCTGTTCTACCGCTGCCACCGGGCCACGCTGCGC
GCGCGGCTGGCCATCGCCCATCTGCTGGAGCCGAACCCGCGCACCCCCGAGAAATGGCCGCGGCAGGCGAGGGCCTACCT
GGCGCTCGCGGCCCGCGACGCCCGCCAGTTGGAGCGGCGGCTCAGAACACCATCAGGTCGGTAA

Upstream 100 bases:

>100_bases
CGCTCGACGGCCTGCGCCACGGCCTCCTGAAGGGCCTTGTCGTCCATGGGATGCCTCGCAAACTGGAAGCCCCAGGCTGC
GCCGCCGGGCGCTGGACGCA

Downstream 100 bases:

>100_bases
GCGCCTCATCGCAGGCCAGCCGCCGGATCGCCTCGGCCAGCAGCGGCGCGCTGGCGAGCGCCTCGACCTTGGCCTGCAGC
GGCGATCCGGCGATGCGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MRRVKPPAAAIPEGAGVPADTETRADPGLAAKVDFLSRPAAYAEGPAQVSRRETHMSWVFFLDGTVYKLKKPVRFPYLDF
STLARREAACRAEVALNQRLAPGIYRGVVPLVLRDGRLALGGEGPVVDWLVRMDRFDQARTLEARLLADGIADGEADALA
DALARFYRTTRRIPTQPAAYLKRIGDALAYHRRVLLEPRLGLPAGQVRHVLAVQHRFLRVRGGLLAARAGRGRILDAHGD
LRPEHIWLGPPIKIIDRLEFSAELRAVDPLDELAFLDLEMERLGAAAAGARVRRRAVARLGERAAPELHLFYRCHRATLR
ARLAIAHLLEPNPRTPEKWPRQARAYLALAARDARQLERRLRTPSGR

Sequences:

>Translated_367_residues
MRRVKPPAAAIPEGAGVPADTETRADPGLAAKVDFLSRPAAYAEGPAQVSRRETHMSWVFFLDGTVYKLKKPVRFPYLDF
STLARREAACRAEVALNQRLAPGIYRGVVPLVLRDGRLALGGEGPVVDWLVRMDRFDQARTLEARLLADGIADGEADALA
DALARFYRTTRRIPTQPAAYLKRIGDALAYHRRVLLEPRLGLPAGQVRHVLAVQHRFLRVRGGLLAARAGRGRILDAHGD
LRPEHIWLGPPIKIIDRLEFSAELRAVDPLDELAFLDLEMERLGAAAAGARVRRRAVARLGERAAPELHLFYRCHRATLR
ARLAIAHLLEPNPRTPEKWPRQARAYLALAARDARQLERRLRTPSGR
>Mature_367_residues
MRRVKPPAAAIPEGAGVPADTETRADPGLAAKVDFLSRPAAYAEGPAQVSRRETHMSWVFFLDGTVYKLKKPVRFPYLDF
STLARREAACRAEVALNQRLAPGIYRGVVPLVLRDGRLALGGEGPVVDWLVRMDRFDQARTLEARLLADGIADGEADALA
DALARFYRTTRRIPTQPAAYLKRIGDALAYHRRVLLEPRLGLPAGQVRHVLAVQHRFLRVRGGLLAARAGRGRILDAHGD
LRPEHIWLGPPIKIIDRLEFSAELRAVDPLDELAFLDLEMERLGAAAAGARVRRRAVARLGERAAPELHLFYRCHRATLR
ARLAIAHLLEPNPRTPEKWPRQARAYLALAARDARQLERRLRTPSGR

Specific function: Some isolated peptides of this protein are able to bind to human U937 monocytoblastic and A549 epithelial cell lines [H]

COG id: COG2187

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Secreted, cell wall [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011009
- InterPro:   IPR010488 [H]

Pfam domain/function: PF06414 Zeta_toxin [H]

EC number: NA

Molecular weight: Translated: 40949; Mature: 40949

Theoretical pI: Translated: 11.39; Mature: 11.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRVKPPAAAIPEGAGVPADTETRADPGLAAKVDFLSRPAAYAEGPAQVSRRETHMSWVF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHCCCHHCCCHHHHHHHHHHEEEEE
FLDGTVYKLKKPVRFPYLDFSTLARREAACRAEVALNQRLAPGIYRGVVPLVLRDGRLAL
EECCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHEEECCCEEE
GGEGPVVDWLVRMDRFDQARTLEARLLADGIADGEADALADALARFYRTTRRIPTQPAAY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHH
LKRIGDALAYHRRVLLEPRLGLPAGQVRHVLAVQHRFLRVRGGLLAARAGRGRILDAHGD
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEECCCC
LRPEHIWLGPPIKIIDRLEFSAELRAVDPLDELAFLDLEMERLGAAAAGARVRRRAVARL
CCCCEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
GERAAPELHLFYRCHRATLRARLAIAHLLEPNPRTPEKWPRQARAYLALAARDARQLERR
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LRTPSGR
HCCCCCC
>Mature Secondary Structure
MRRVKPPAAAIPEGAGVPADTETRADPGLAAKVDFLSRPAAYAEGPAQVSRRETHMSWVF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHCCCHHCCCHHHHHHHHHHEEEEE
FLDGTVYKLKKPVRFPYLDFSTLARREAACRAEVALNQRLAPGIYRGVVPLVLRDGRLAL
EECCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHEEECCCEEE
GGEGPVVDWLVRMDRFDQARTLEARLLADGIADGEADALADALARFYRTTRRIPTQPAAY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHH
LKRIGDALAYHRRVLLEPRLGLPAGQVRHVLAVQHRFLRVRGGLLAARAGRGRILDAHGD
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEECCCC
LRPEHIWLGPPIKIIDRLEFSAELRAVDPLDELAFLDLEMERLGAAAAGARVRRRAVARL
CCCCEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
GERAAPELHLFYRCHRATLRARLAIAHLLEPNPRTPEKWPRQARAYLALAARDARQLERR
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LRTPSGR
HCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]