| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
Click here to switch to the map view.
The map label for this gene is 197104109
Identifier: 197104109
GI number: 197104109
Start: 691988
End: 692653
Strand: Direct
Name: 197104109
Synonym: PHZ_c0643
Alternate gene names: NA
Gene position: 691988-692653 (Clockwise)
Preceding gene: 197104108
Following gene: 197104111
Centisome position: 17.32
GC content: 75.98
Gene sequence:
>666_bases ATGGGGTTCCGCAACCGGGTCGAGGCGGGCCAGGCGCTGTCTCGGGCTCTTCCTCAGGCGCTGGCCGGCTGTCGCGGACA GGACGTGGTGGTGCTCGCGCTGCCGCGCGGGGGCGTCCCCGTCGCCGCGGAGATCGCCCGCGCGCTGAAGGCGCCGCTGG ACCTGGTGCTCGTGCGCAAGATCGGCGCGCCCTTCCAGGAGGAGCTGGCCATGGGCGCGGTGGCCGACGCGGGCGAGCCC GAGACGGTCCGCAACGAGGACGTCATCGCCGCCGTGGGCGTGGACGAGGCCGGCTTCGAGGCGGCCCGGGCGCGGGAGCT GGACGAGATGGAGCGCCGGCGGCGGCGCTACCTGAAGGACCGGCCGCGGGCCGAGGTGGTCGGCAAGGTGGCGATCGTCG TGGACGACGGGGTGGCGACGGGCGCCACGACGCGGGCGGCGCTGCGGGCCGTGCGGCGGCGGGGTCCGGCGAAGCTGATC CTGGCGACCCCGGTGGCGCCTGCCGAGCGGCTGCCCGAGCTGCGCGCCGAGGCCGACGAGGTGGTCTGCCTGGAAGACCT GCGCTGGGGCGCGATCGGCCTCTGCTACGACGACTTCCGCCAGGTGGAGGACGAGACGGTGGTGGAACTCCTCGCGGAAT TCCCGCCGTCCCGGCCGCCGGCCTAG
Upstream 100 bases:
>100_bases CCGGCTCTCGGCGACGCCCTGACGGACCGCCTTGCGCCGGAGCCCCGCGGAGCGCAGCCTCGACCGGTCTCAAGCGGGGC GGCGGCGGGAGGTTCGGACC
Downstream 100 bases:
>100_bases CTGGGAAGGCCTGCCGAGCCGTCGTCGGGTTCGACGGCGCCCGGCGGCAGGACGATGCGGTTGGTGACCGAGGCGACGCC CGGCAGGGTCCAGGCCAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MGFRNRVEAGQALSRALPQALAGCRGQDVVVLALPRGGVPVAAEIARALKAPLDLVLVRKIGAPFQEELAMGAVADAGEP ETVRNEDVIAAVGVDEAGFEAARARELDEMERRRRRYLKDRPRAEVVGKVAIVVDDGVATGATTRAALRAVRRRGPAKLI LATPVAPAERLPELRAEADEVVCLEDLRWGAIGLCYDDFRQVEDETVVELLAEFPPSRPPA
Sequences:
>Translated_221_residues MGFRNRVEAGQALSRALPQALAGCRGQDVVVLALPRGGVPVAAEIARALKAPLDLVLVRKIGAPFQEELAMGAVADAGEP ETVRNEDVIAAVGVDEAGFEAARARELDEMERRRRRYLKDRPRAEVVGKVAIVVDDGVATGATTRAALRAVRRRGPAKLI LATPVAPAERLPELRAEADEVVCLEDLRWGAIGLCYDDFRQVEDETVVELLAEFPPSRPPA >Mature_220_residues GFRNRVEAGQALSRALPQALAGCRGQDVVVLALPRGGVPVAAEIARALKAPLDLVLVRKIGAPFQEELAMGAVADAGEPE TVRNEDVIAAVGVDEAGFEAARARELDEMERRRRRYLKDRPRAEVVGKVAIVVDDGVATGATTRAALRAVRRRGPAKLIL ATPVAPAERLPELRAEADEVVCLEDLRWGAIGLCYDDFRQVEDETVVELLAEFPPSRPPA
Specific function: Unknown
COG id: COG1926
COG function: function code R; Predicted phosphoribosyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the dienelactone hydrolase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002925 - InterPro: IPR000836 [H]
Pfam domain/function: PF01738 DLH; PF00156 Pribosyltran [H]
EC number: NA
Molecular weight: Translated: 23803; Mature: 23671
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFRNRVEAGQALSRALPQALAGCRGQDVVVLALPRGGVPVAAEIARALKAPLDLVLVRK CCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHH IGAPFQEELAMGAVADAGEPETVRNEDVIAAVGVDEAGFEAARARELDEMERRRRRYLKD HCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHC RPRAEVVGKVAIVVDDGVATGATTRAALRAVRRRGPAKLILATPVAPAERLPELRAEADE CCHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHCHHHHCCCCC VVCLEDLRWGAIGLCYDDFRQVEDETVVELLAEFPPSRPPA EEEHHHCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure GFRNRVEAGQALSRALPQALAGCRGQDVVVLALPRGGVPVAAEIARALKAPLDLVLVRK CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHH IGAPFQEELAMGAVADAGEPETVRNEDVIAAVGVDEAGFEAARARELDEMERRRRRYLKD HCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHC RPRAEVVGKVAIVVDDGVATGATTRAALRAVRRRGPAKLILATPVAPAERLPELRAEADE CCHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHCHHHHCCCCC VVCLEDLRWGAIGLCYDDFRQVEDETVVELLAEFPPSRPPA EEEHHHCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]