| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104047
Identifier: 197104047
GI number: 197104047
Start: 615418
End: 616062
Strand: Direct
Name: 197104047
Synonym: PHZ_c0581
Alternate gene names: NA
Gene position: 615418-616062 (Clockwise)
Preceding gene: 197104046
Following gene: 197104048
Centisome position: 15.4
GC content: 72.25
Gene sequence:
>645_bases GTGAACGCGCTCAGCCGCCGCGGCGCCCTCACGGTCGGTCTGGCCGCTGGCCTCGCCGGCGGTCTGGGCCTCGCGCTGGC GGGCCCGCAGGCGCTCGCGGCCGCCGAGCCGGCGGCAGGCGACATCAGCGTGGGCAGCCCCAAGGCGCCGGTGCACGTGG TCGAGTACCTGTCGGTCACCTGCCCGCACTGCGCGCACTTCAACGCCGACGTCTTCCCGACGCTGAAGGCGAAGTACATC GACACGGGCCAGGTGCGCTGGACCTTCCGGGAGATGCTGACCGCGCCGGGCAACGTCGCGGCCGCGGGCTTCCTGATGGC CCGCTGCGCCGGTCCGTCGAAGTACGTGAAGGTCGTGGACGAGGTCCTGCGCAGCCAGCCGCGCTGGCAGAGCGGGAACA TCAAGCCGATCTTCCTGGAGATCGCCCAGGCGAACGGCCTGACCGAGGCGCAGTTCGAGGCCTGCCTGACCGATCCGAAG GGGCAGGAGGCGCTGCAGCAGCGGCTGATGCTCGCCCAGAAGGACGAGGTCACCGGCACGCCCACCTTCTTCGTCAACGG CAAGCGCGTCGGCGGCCCGGGCGTGCCCGATCTCGCCGACATGGAGGCGGCGATCGCACAGGCCGCGAAGGGCGGGAGGC GCTAG
Upstream 100 bases:
>100_bases CGGCCACCCCCACCTTCGTGGTCAACGGCAAGAAGGTGAAGGAAGGCGACATCACCCTGGCCGAGCTCGACGCGGCCATC GCCGAGGCTTCGAAGTAGCC
Downstream 100 bases:
>100_bases GGGCCCGTGCACTTCCAGCGGCTGCGACTGTCGGGCTTCAAGTCCTTCGTCGATCCGACCGAGTTCCGGATCGAGCGGGG AATCACGGGCATCGTCGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MNALSRRGALTVGLAAGLAGGLGLALAGPQALAAAEPAAGDISVGSPKAPVHVVEYLSVTCPHCAHFNADVFPTLKAKYI DTGQVRWTFREMLTAPGNVAAAGFLMARCAGPSKYVKVVDEVLRSQPRWQSGNIKPIFLEIAQANGLTEAQFEACLTDPK GQEALQQRLMLAQKDEVTGTPTFFVNGKRVGGPGVPDLADMEAAIAQAAKGGRR
Sequences:
>Translated_214_residues MNALSRRGALTVGLAAGLAGGLGLALAGPQALAAAEPAAGDISVGSPKAPVHVVEYLSVTCPHCAHFNADVFPTLKAKYI DTGQVRWTFREMLTAPGNVAAAGFLMARCAGPSKYVKVVDEVLRSQPRWQSGNIKPIFLEIAQANGLTEAQFEACLTDPK GQEALQQRLMLAQKDEVTGTPTFFVNGKRVGGPGVPDLADMEAAIAQAAKGGRR >Mature_214_residues MNALSRRGALTVGLAAGLAGGLGLALAGPQALAAAEPAAGDISVGSPKAPVHVVEYLSVTCPHCAHFNADVFPTLKAKYI DTGQVRWTFREMLTAPGNVAAAGFLMARCAGPSKYVKVVDEVLRSQPRWQSGNIKPIFLEIAQANGLTEAQFEACLTDPK GQEALQQRLMLAQKDEVTGTPTFFVNGKRVGGPGVPDLADMEAAIAQAAKGGRR
Specific function: May be required for disulfide bond formation in some proteins [H]
COG id: COG1651
COG function: function code O; Protein-disulfide isomerase
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR012335 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22352; Mature: 22352
Theoretical pI: Translated: 8.64; Mature: 8.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNALSRRGALTVGLAAGLAGGLGLALAGPQALAAAEPAAGDISVGSPKAPVHVVEYLSVT CCCCCCCCCEEEHHHHHHHCCCCEEECCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHC CPHCAHFNADVFPTLKAKYIDTGQVRWTFREMLTAPGNVAAAGFLMARCAGPSKYVKVVD CCCHHCCCCCCCCCCCEEECCCCCEEHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHH EVLRSQPRWQSGNIKPIFLEIAQANGLTEAQFEACLTDPKGQEALQQRLMLAQKDEVTGT HHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC PTFFVNGKRVGGPGVPDLADMEAAIAQAAKGGRR CEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNALSRRGALTVGLAAGLAGGLGLALAGPQALAAAEPAAGDISVGSPKAPVHVVEYLSVT CCCCCCCCCEEEHHHHHHHCCCCEEECCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHC CPHCAHFNADVFPTLKAKYIDTGQVRWTFREMLTAPGNVAAAGFLMARCAGPSKYVKVVD CCCHHCCCCCCCCCCCEEECCCCCEEHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHH EVLRSQPRWQSGNIKPIFLEIAQANGLTEAQFEACLTDPKGQEALQQRLMLAQKDEVTGT HHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC PTFFVNGKRVGGPGVPDLADMEAAIAQAAKGGRR CEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA