| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
Click here to switch to the map view.
The map label for this gene is dsbA
Identifier: 197104046
GI number: 197104046
Start: 614798
End: 615415
Strand: Direct
Name: dsbA
Synonym: PHZ_c0580
Alternate gene names: NA
Gene position: 614798-615415 (Clockwise)
Preceding gene: 197104045
Following gene: 197104047
Centisome position: 15.38
GC content: 66.99
Gene sequence:
>618_bases ATGACGATCCTCAGCCGCCGTCTTCTCCTGGTCGCCGCAGCGGGCGCGAGCCTCGTGCTCGCCGGATGCGGCAAGGGCGC CGGTCCCACGGCCTCCGCCGAGGACATGACCCTCGGCGATGCGAATGCGCCGGTGAAGGTGGTCGAATACGCCTCGGTGA CCTGCAGCCACTGCGCGGCCTTCAACGAGACGACCTTCCCGCAGTTCAAGGCCAAGTACATCGACACCGGCAAGGTGCAC TACACCTTCAAGGAGTTCCTGACCCCGCCCGAGCAGGTCGCCGCCGCCGGATTCCTGGTCGCGCGCTGTGCGGGCAAGGA CAAGTACTTCACGGTCATCGACGCCCTGTTCCGCTCGCAGCAGGAGATGTTCCAGAGCGGCGACATGCGCGGCGGCCTGC TGCGCGTCGCCCAGTCGGCCGGCATGACCGAGGCGCAGTTCAACGCCTGTATCCAGGACGAGGCGGCGCTGAAGGCGCTC AACGATCGGGTGGAGAAGGCGATCCGCCAGGACGGCATCTCGGCCACCCCCACCTTCGTGGTCAACGGCAAGAAGGTGAA GGAAGGCGACATCACCCTGGCCGAGCTCGACGCGGCCATCGCCGAGGCTTCGAAGTAG
Upstream 100 bases:
>100_bases CCGTCCCATCGCGTAGGGAGGGGCGTGGCCGGCGCGGTTTGCGCGCGCTTTCGGGAATCGCGCTTTAATCCTTCGTTCAG AACTACCGGAAGGTCCTTCG
Downstream 100 bases:
>100_bases CCGTGAACGCGCTCAGCCGCCGCGGCGCCCTCACGGTCGGTCTGGCCGCTGGCCTCGCCGGCGGTCTGGGCCTCGCGCTG GCGGGCCCGCAGGCGCTCGC
Product: probable disulfide isomerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MTILSRRLLLVAAAGASLVLAGCGKGAGPTASAEDMTLGDANAPVKVVEYASVTCSHCAAFNETTFPQFKAKYIDTGKVH YTFKEFLTPPEQVAAAGFLVARCAGKDKYFTVIDALFRSQQEMFQSGDMRGGLLRVAQSAGMTEAQFNACIQDEAALKAL NDRVEKAIRQDGISATPTFVVNGKKVKEGDITLAELDAAIAEASK
Sequences:
>Translated_205_residues MTILSRRLLLVAAAGASLVLAGCGKGAGPTASAEDMTLGDANAPVKVVEYASVTCSHCAAFNETTFPQFKAKYIDTGKVH YTFKEFLTPPEQVAAAGFLVARCAGKDKYFTVIDALFRSQQEMFQSGDMRGGLLRVAQSAGMTEAQFNACIQDEAALKAL NDRVEKAIRQDGISATPTFVVNGKKVKEGDITLAELDAAIAEASK >Mature_204_residues TILSRRLLLVAAAGASLVLAGCGKGAGPTASAEDMTLGDANAPVKVVEYASVTCSHCAAFNETTFPQFKAKYIDTGKVHY TFKEFLTPPEQVAAAGFLVARCAGKDKYFTVIDALFRSQQEMFQSGDMRGGLLRVAQSAGMTEAQFNACIQDEAALKALN DRVEKAIRQDGISATPTFVVNGKKVKEGDITLAELDAAIAEASK
Specific function: May be required for disulfide bond formation in some proteins [H]
COG id: COG1651
COG function: function code O; Protein-disulfide isomerase
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR012335 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21720; Mature: 21589
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTILSRRLLLVAAAGASLVLAGCGKGAGPTASAEDMTLGDANAPVKVVEYASVTCSHCAA CCHHHHHHHHEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHH FNETTFPQFKAKYIDTGKVHYTFKEFLTPPEQVAAAGFLVARCAGKDKYFTVIDALFRSQ CCCCCCCCHHHHEECCCEEEEEHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH QEMFQSGDMRGGLLRVAQSAGMTEAQFNACIQDEAALKALNDRVEKAIRQDGISATPTFV HHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE VNGKKVKEGDITLAELDAAIAEASK ECCCEECCCCEEHHHHHHHHHHCCC >Mature Secondary Structure TILSRRLLLVAAAGASLVLAGCGKGAGPTASAEDMTLGDANAPVKVVEYASVTCSHCAA CHHHHHHHHEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHH FNETTFPQFKAKYIDTGKVHYTFKEFLTPPEQVAAAGFLVARCAGKDKYFTVIDALFRSQ CCCCCCCCHHHHEECCCEEEEEHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH QEMFQSGDMRGGLLRVAQSAGMTEAQFNACIQDEAALKALNDRVEKAIRQDGISATPTFV HHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE VNGKKVKEGDITLAELDAAIAEASK ECCCEECCCCEEHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA