| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104029
Identifier: 197104029
GI number: 197104029
Start: 596192
End: 597175
Strand: Direct
Name: 197104029
Synonym: PHZ_c0563
Alternate gene names: NA
Gene position: 596192-597175 (Clockwise)
Preceding gene: 197104028
Following gene: 197104030
Centisome position: 14.92
GC content: 71.34
Gene sequence:
>984_bases ATGACCCTGCACACCAAGCTCTGCGACCTGCTGGAGGTGAGGCATCCGATCATGCTCGCCGGCATGGGCGGGGTGTCCTA CGCCGAGCTCGTGGCGGCGGTGTCCAACGCCGGCGGCTATGGCGTGCTGGGCATGGCCGGCCGCGGGCCGGACTTCATCC GCGACCAGATGCGGCAGGTCCGCAAGCTTACCGACAAGCCTTTCGGCGTGGACCTGCTGGCCGCCTCCCCGGAAAGCCTG ACCGACTCGGTCGACGTGATCATAGAGGAGGGCGCCTCCAGCTTCGTCGCCGGCCTGGGCGTGCCGATGCCGATCCTCGA GAAGCTGAAGAACGCCGGCCTGAAGGTCATGGTGGTCTGCGGGGCCGTGAAGCACGCGGTGAAGGCCGAACAGGCCGGCT GCGATGCGGTGATCTGCCAGGGCGGCGAAGGCGGCGGTCACACCGGCCTCGTCGGCACCATGCCGCTGGTGGCCCAGGCG GTGGAGGCGGTGAAGATCCCGGTGGTGGCGGCCGGCGGCCTCTACGACGGCCGGGGCCTGGCGGCGGCGCTGTCGCTGGG CGCCGTCGGCGTCTGGATGGGCACGCGGTTCATCGCCTCGAAGGAGGCCCACGCCGGCGAGATGTACCGCCAGACCATCG TCGCGGCCTCGGACGAGGACACGGTGCGCACCCGCTGCTACTCGGGCAAGCCGATGCGGGTGAAGAAGAACCCCTACGTC GAGGACTGGGAAAGCCGCCCGGCCGACATCCAGCCCTTCCCGATGCAGGCGATGATCTCGCACAACGCCGGCGTCATGGG CGGCATCGGCGGCCAGGTCGAGGGGCTGGACGCCGACAAGTCCTGCTTCGCCATGGGCCAGTCGGCGGGCGGCGTCCGCG ACGTGCGTCCTGCGGGCGAGATCGTCGCGGCCATCATGGCCGAGGCCGAGGCGGCGATCGACCGGGTCGCGGCCCTGCGC GGCCGGGCCATGGCCCCCGCCTGA
Upstream 100 bases:
>100_bases GATGACGGTGGACGGCGCCTGGACCGCAGCCTGACCTCGCGTCACGGTTTTCAACGATAACCCAGGGCGCCATGCTCCTC CCAAAGACCGGGAGGAGCCG
Downstream 100 bases:
>100_bases CGGTCAGGGCGCGACGGCGAGGTAGCCGGTCGGGTCCCGGACGAAGCCGGCCGCCTCGGTCAGGCAGCCTTGCCAGGCGG CCAGGTGCGTGCGGCCGCTG
Product: 2-nitropropane dioxygenase-like dioxygenase
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MTLHTKLCDLLEVRHPIMLAGMGGVSYAELVAAVSNAGGYGVLGMAGRGPDFIRDQMRQVRKLTDKPFGVDLLAASPESL TDSVDVIIEEGASSFVAGLGVPMPILEKLKNAGLKVMVVCGAVKHAVKAEQAGCDAVICQGGEGGGHTGLVGTMPLVAQA VEAVKIPVVAAGGLYDGRGLAAALSLGAVGVWMGTRFIASKEAHAGEMYRQTIVAASDEDTVRTRCYSGKPMRVKKNPYV EDWESRPADIQPFPMQAMISHNAGVMGGIGGQVEGLDADKSCFAMGQSAGGVRDVRPAGEIVAAIMAEAEAAIDRVAALR GRAMAPA
Sequences:
>Translated_327_residues MTLHTKLCDLLEVRHPIMLAGMGGVSYAELVAAVSNAGGYGVLGMAGRGPDFIRDQMRQVRKLTDKPFGVDLLAASPESL TDSVDVIIEEGASSFVAGLGVPMPILEKLKNAGLKVMVVCGAVKHAVKAEQAGCDAVICQGGEGGGHTGLVGTMPLVAQA VEAVKIPVVAAGGLYDGRGLAAALSLGAVGVWMGTRFIASKEAHAGEMYRQTIVAASDEDTVRTRCYSGKPMRVKKNPYV EDWESRPADIQPFPMQAMISHNAGVMGGIGGQVEGLDADKSCFAMGQSAGGVRDVRPAGEIVAAIMAEAEAAIDRVAALR GRAMAPA >Mature_326_residues TLHTKLCDLLEVRHPIMLAGMGGVSYAELVAAVSNAGGYGVLGMAGRGPDFIRDQMRQVRKLTDKPFGVDLLAASPESLT DSVDVIIEEGASSFVAGLGVPMPILEKLKNAGLKVMVVCGAVKHAVKAEQAGCDAVICQGGEGGGHTGLVGTMPLVAQAV EAVKIPVVAAGGLYDGRGLAAALSLGAVGVWMGTRFIASKEAHAGEMYRQTIVAASDEDTVRTRCYSGKPMRVKKNPYVE DWESRPADIQPFPMQAMISHNAGVMGGIGGQVEGLDADKSCFAMGQSAGGVRDVRPAGEIVAAIMAEAEAAIDRVAALRG RAMAPA
Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 33802; Mature: 33670
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLHTKLCDLLEVRHPIMLAGMGGVSYAELVAAVSNAGGYGVLGMAGRGPDFIRDQMRQV CCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHH RKLTDKPFGVDLLAASPESLTDSVDVIIEEGASSFVAGLGVPMPILEKLKNAGLKVMVVC HHHHCCCCCEEEEECCCHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHCCCEEEEEH GAVKHAVKAEQAGCDAVICQGGEGGGHTGLVGTMPLVAQAVEAVKIPVVAAGGLYDGRGL HHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCHH AAALSLGAVGVWMGTRFIASKEAHAGEMYRQTIVAASDEDTVRTRCYSGKPMRVKKNPYV HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEECCCCC EDWESRPADIQPFPMQAMISHNAGVMGGIGGQVEGLDADKSCFAMGQSAGGVRDVRPAGE CCCCCCCCCCCCCCHHHHHHCCCCEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHH IVAAIMAEAEAAIDRVAALRGRAMAPA HHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TLHTKLCDLLEVRHPIMLAGMGGVSYAELVAAVSNAGGYGVLGMAGRGPDFIRDQMRQV CCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHH RKLTDKPFGVDLLAASPESLTDSVDVIIEEGASSFVAGLGVPMPILEKLKNAGLKVMVVC HHHHCCCCCEEEEECCCHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHCCCEEEEEH GAVKHAVKAEQAGCDAVICQGGEGGGHTGLVGTMPLVAQAVEAVKIPVVAAGGLYDGRGL HHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCHH AAALSLGAVGVWMGTRFIASKEAHAGEMYRQTIVAASDEDTVRTRCYSGKPMRVKKNPYV HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEECCCCC EDWESRPADIQPFPMQAMISHNAGVMGGIGGQVEGLDADKSCFAMGQSAGGVRDVRPAGE CCCCCCCCCCCCCCHHHHHHCCCCEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHH IVAAIMAEAEAAIDRVAALRGRAMAPA HHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA