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The map label for this gene is ycaQ [H]

Identifier: 197103999

GI number: 197103999

Start: 560486

End: 561694

Strand: Reverse

Name: ycaQ [H]

Synonym: PHZ_c0533

Alternate gene names: 197103999

Gene position: 561694-560486 (Counterclockwise)

Preceding gene: 197104000

Following gene: 197103994

Centisome position: 14.06

GC content: 73.61

Gene sequence:

>1209_bases
ATGAAGGATTCGCTCACCGCCGGCGAGGCCCGGCGCATCGCGCTGGCGGCCCAGGGCTTCGGCGCCCGCCCGGACGGCGA
GGTCGGCCGCCGCCAGCTCGTCAAGCTGGTGGACCGCCTGGGCGTCGTGCAGATCGACAGCGTCAACGTGGTCTCGCGCA
CCCACTATCTGCCCGCCTTCTCGCGCCTGGGCGCCTATCCGCGCGAGCTGCTGGAGGAGATCGCCTGGGGCCGGAAGAAG
GCGCTGTTCGAGTACTGGGCGCACGAGGCCAGCCTGCTGCCCCTCGGCGCCCAGCCGCTGTTCCGCTGGCGCATGGCGGA
CGCCCGCGAGGGCGTCGGGACCTGGAAGGGCATCGCCCGGTTCCTGCGCGAGCGACGCGACTTCGTGGATGCGGTGCTGG
ACGAGATCCGCAGCCGCGGGCCGATGTCGGCCTCCGAGCTGGAGATGGGCCACAAGGGCCAGGGCGGCTGGTGGGGCTGG
AGCGAGGCCAAGCGGGCGCTGGAGGGCCTCTTCTGGGCGGGCGAGCTCACCACCGCCACCCGGCGCGGAACCTTCGAGCG
GGTCTACGGCCTGCCCGAGACGGTGCTGCCGAAGGCGGTGCGCGAGGCGCCGACGCCGCCGCGCGAGGCGGCCCAACGCG
AGCTGCTGAGGATCGCCGCCCGAGCCATGGGAATCGCCACGGCCCGCGACCTGCGCGACTATTTCCGCATGGGCGTGGAG
GACAGCCGCGCCCGCCTCGCCGACCTCGTGGAGGCCGGCGACCTCGTCCCGGTGACGGTGAAGGGCTGGCGCGAACAGGC
CTATCTCGACCCGGCCGCGCGGCGGCCGCGGAAGGTGCAGGCCCACGCCCTCCTCTCCCCCTTCGACAATCTGATCTGGT
TCCGCGACCGGACCGAGCGGATGTTCGGGGTGAAGGTGCGGCTCGAGATCTACACCCCGGCCGAGAAGCGCACCCACGGC
TACTATGTCCTGCCGTTCCTGGAGGGCGATGCGATCACGGCCCGGGTCGACCTGAAGGCCGACCGCAAGGCGGGCGAGCT
GATCGTCCAGGCCAGCCACGCCGAGCCCTGGGCCTCGGACCGGACGGCCGCGCGGCTCGCCGAGGAGCTGGGGACGATGG
CGGCCTGGCTGGGACTGGGGCGCGTCCGCGTCGCCCGCCGCGGCGACCTCGCCGCCGCGCTGGAGGACGCGATCGGTCAG
CCCAGGTAG

Upstream 100 bases:

>100_bases
AGCCCGATCCCGAGGTGGTCTTCCGCTTCACGCCCGAGGCGCTGACGCGGCTCAACCGCTGAACGTTGTTCTTGCTTCGT
TCGCACGCTAGCCTGTCTGC

Downstream 100 bases:

>100_bases
ATCCAGCCCTCCCCCAGGCTGGACATGGACACGCCCGCCAGGACGATCCGGCCGTCCGCGACGTCGACGATCACGTCGGC
GCCCGACTGGTAGGCGTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MKDSLTAGEARRIALAAQGFGARPDGEVGRRQLVKLVDRLGVVQIDSVNVVSRTHYLPAFSRLGAYPRELLEEIAWGRKK
ALFEYWAHEASLLPLGAQPLFRWRMADAREGVGTWKGIARFLRERRDFVDAVLDEIRSRGPMSASELEMGHKGQGGWWGW
SEAKRALEGLFWAGELTTATRRGTFERVYGLPETVLPKAVREAPTPPREAAQRELLRIAARAMGIATARDLRDYFRMGVE
DSRARLADLVEAGDLVPVTVKGWREQAYLDPAARRPRKVQAHALLSPFDNLIWFRDRTERMFGVKVRLEIYTPAEKRTHG
YYVLPFLEGDAITARVDLKADRKAGELIVQASHAEPWASDRTAARLAEELGTMAAWLGLGRVRVARRGDLAAALEDAIGQ
PR

Sequences:

>Translated_402_residues
MKDSLTAGEARRIALAAQGFGARPDGEVGRRQLVKLVDRLGVVQIDSVNVVSRTHYLPAFSRLGAYPRELLEEIAWGRKK
ALFEYWAHEASLLPLGAQPLFRWRMADAREGVGTWKGIARFLRERRDFVDAVLDEIRSRGPMSASELEMGHKGQGGWWGW
SEAKRALEGLFWAGELTTATRRGTFERVYGLPETVLPKAVREAPTPPREAAQRELLRIAARAMGIATARDLRDYFRMGVE
DSRARLADLVEAGDLVPVTVKGWREQAYLDPAARRPRKVQAHALLSPFDNLIWFRDRTERMFGVKVRLEIYTPAEKRTHG
YYVLPFLEGDAITARVDLKADRKAGELIVQASHAEPWASDRTAARLAEELGTMAAWLGLGRVRVARRGDLAAALEDAIGQ
PR
>Mature_402_residues
MKDSLTAGEARRIALAAQGFGARPDGEVGRRQLVKLVDRLGVVQIDSVNVVSRTHYLPAFSRLGAYPRELLEEIAWGRKK
ALFEYWAHEASLLPLGAQPLFRWRMADAREGVGTWKGIARFLRERRDFVDAVLDEIRSRGPMSASELEMGHKGQGGWWGW
SEAKRALEGLFWAGELTTATRRGTFERVYGLPETVLPKAVREAPTPPREAAQRELLRIAARAMGIATARDLRDYFRMGVE
DSRARLADLVEAGDLVPVTVKGWREQAYLDPAARRPRKVQAHALLSPFDNLIWFRDRTERMFGVKVRLEIYTPAEKRTHG
YYVLPFLEGDAITARVDLKADRKAGELIVQASHAEPWASDRTAARLAEELGTMAAWLGLGRVRVARRGDLAAALEDAIGQ
PR

Specific function: Unknown

COG id: COG3214

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787145, Length=363, Percent_Identity=35.5371900826446, Blast_Score=193, Evalue=2e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009351 [H]

Pfam domain/function: PF06224 DUF1006 [H]

EC number: NA

Molecular weight: Translated: 45085; Mature: 45085

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDSLTAGEARRIALAAQGFGARPDGEVGRRQLVKLVDRLGVVQIDSVNVVSRTHYLPAF
CCCCCCCCCHHEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHH
SRLGAYPRELLEEIAWGRKKALFEYWAHEASLLPLGAQPLFRWRMADAREGVGTWKGIAR
HHHCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHH
FLRERRDFVDAVLDEIRSRGPMSASELEMGHKGQGGWWGWSEAKRALEGLFWAGELTTAT
HHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHH
RRGTFERVYGLPETVLPKAVREAPTPPREAAQRELLRIAARAMGIATARDLRDYFRMGVE
HCCCHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DSRARLADLVEAGDLVPVTVKGWREQAYLDPAARRPRKVQAHALLSPFDNLIWFRDRTER
HHHHHHHHHHHCCCEEEEEECCCHHHHHCCHHHCCCCHHHHHHHHHHHHHHEEHHCCCCC
MFGVKVRLEIYTPAEKRTHGYYVLPFLEGDAITARVDLKADRKAGELIVQASHAEPWASD
EEEEEEEEEEECCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCEEEEECCCCCCCCH
RTAARLAEELGTMAAWLGLGRVRVARRGDLAAALEDAIGQPR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MKDSLTAGEARRIALAAQGFGARPDGEVGRRQLVKLVDRLGVVQIDSVNVVSRTHYLPAF
CCCCCCCCCHHEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHH
SRLGAYPRELLEEIAWGRKKALFEYWAHEASLLPLGAQPLFRWRMADAREGVGTWKGIAR
HHHCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHH
FLRERRDFVDAVLDEIRSRGPMSASELEMGHKGQGGWWGWSEAKRALEGLFWAGELTTAT
HHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHH
RRGTFERVYGLPETVLPKAVREAPTPPREAAQRELLRIAARAMGIATARDLRDYFRMGVE
HCCCHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DSRARLADLVEAGDLVPVTVKGWREQAYLDPAARRPRKVQAHALLSPFDNLIWFRDRTER
HHHHHHHHHHHCCCEEEEEECCCHHHHHCCHHHCCCCHHHHHHHHHHHHHHEEHHCCCCC
MFGVKVRLEIYTPAEKRTHGYYVLPFLEGDAITARVDLKADRKAGELIVQASHAEPWASD
EEEEEEEEEEECCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCEEEEECCCCCCCCH
RTAARLAEELGTMAAWLGLGRVRVARRGDLAAALEDAIGQPR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]