Click here to switch to the map view.

The map label for this gene is 197103980

Identifier: 197103980

GI number: 197103980

Start: 539836

End: 540552

Strand: Reverse

Name: 197103980

Synonym: PHZ_c0514

Alternate gene names: NA

Gene position: 540552-539836 (Counterclockwise)

Preceding gene: 197103981

Following gene: 197103979

Centisome position: 13.53

GC content: 74.06

Gene sequence:

>717_bases
TTGAAGAAGCTGCTCCGGAGCGACGGCGTCCAGGCCTTCCTCGGCTGGGTGCTGGGGACCTATCTGCGCATCGTGCTGCG
CACCGTGCGCTGGCGGCACGAGAACGTCGCCTGCGTCGAGCCGGTGCTGTCCGACCAGGAGACGGGGGCGATCGCCCTCT
TCTGGCACGGCCGCATCCCGCTGTGCCTGGCCACCGCGCCGCAGTGGTGGCGCAAGCGGACCCGCTGCCTCGTCTCCCCC
TCGGCCGACGGGGAATTCATCGCCCAGGCGCTGTCGATGTCGGGATTTCCCGCGATCCGGGTCTCCTCGGCCAAGAAGGG
CGACTCGGCCAAGGCCCGGCAGGCCGTCGCCGCCATCCGCGAGGCCACGACATGGGTGGCGGGCGGCGGCGCCCTCGTGG
TCACGCCCGACGGACCGCGCGGCCCCAACGAGGTGATCCAGGCGGGCGCGCTGCAGATCGCCCGCCGTTCGGGCCAGCCG
GTGTTCCTGATGGGGATCGCCGCCAATCCCGCCTGGCAGCTCGAGGACACCTGGGACAGGGTGATGTTCGCCGCCCCGTT
CGGCCGCGGCGCCGTCGTCTGGGAGGGGCCGCTGCACGTGCCCCCCGACGCCGGCGAGGCCGAGATCGCCGCGCTGATCG
AGAACTGGTCCGCGCGCCTGTCCGCCGCCACCCGCCGGGCCGAGGCCCTGGTGGGGCGGGCGCCCGCGCCGCATTGA

Upstream 100 bases:

>100_bases
GCCGCATCGTGGAGACGGGCGACCACGACGCCCTGGTCAGGAAGCGCGGCCTCTACGCCCGGCTGGCCCGCAGCCAGCAC
CTGGAGGCGGAGCCCGCCGC

Downstream 100 bases:

>100_bases
TCCTTCGCCCGGTTCGCGAGACATAGGCTCCGATGGCCAAGGCCCACGCGCACTCCGACCACCATGACGACCATGGGCAT
GACCACGCTCACGGTCACGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MKKLLRSDGVQAFLGWVLGTYLRIVLRTVRWRHENVACVEPVLSDQETGAIALFWHGRIPLCLATAPQWWRKRTRCLVSP
SADGEFIAQALSMSGFPAIRVSSAKKGDSAKARQAVAAIREATTWVAGGGALVVTPDGPRGPNEVIQAGALQIARRSGQP
VFLMGIAANPAWQLEDTWDRVMFAAPFGRGAVVWEGPLHVPPDAGEAEIAALIENWSARLSAATRRAEALVGRAPAPH

Sequences:

>Translated_238_residues
MKKLLRSDGVQAFLGWVLGTYLRIVLRTVRWRHENVACVEPVLSDQETGAIALFWHGRIPLCLATAPQWWRKRTRCLVSP
SADGEFIAQALSMSGFPAIRVSSAKKGDSAKARQAVAAIREATTWVAGGGALVVTPDGPRGPNEVIQAGALQIARRSGQP
VFLMGIAANPAWQLEDTWDRVMFAAPFGRGAVVWEGPLHVPPDAGEAEIAALIENWSARLSAATRRAEALVGRAPAPH
>Mature_238_residues
MKKLLRSDGVQAFLGWVLGTYLRIVLRTVRWRHENVACVEPVLSDQETGAIALFWHGRIPLCLATAPQWWRKRTRCLVSP
SADGEFIAQALSMSGFPAIRVSSAKKGDSAKARQAVAAIREATTWVAGGGALVVTPDGPRGPNEVIQAGALQIARRSGQP
VFLMGIAANPAWQLEDTWDRVMFAAPFGRGAVVWEGPLHVPPDAGEAEIAALIENWSARLSAATRRAEALVGRAPAPH

Specific function: Unknown

COG id: COG2121

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To H.pylori HP0270 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007172
- ProDom:   PD032436 [H]

Pfam domain/function: PF04028 DUF374 [H]

EC number: NA

Molecular weight: Translated: 25656; Mature: 25656

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLRSDGVQAFLGWVLGTYLRIVLRTVRWRHENVACVEPVLSDQETGAIALFWHGRIP
CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEEECCCCC
LCLATAPQWWRKRTRCLVSPSADGEFIAQALSMSGFPAIRVSSAKKGDSAKARQAVAAIR
EEEECCCHHHHHHHEEEECCCCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHH
EATTWVAGGGALVVTPDGPRGPNEVIQAGALQIARRSGQPVFLMGIAANPAWQLEDTWDR
HHHHEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHH
VMFAAPFGRGAVVWEGPLHVPPDAGEAEIAALIENWSARLSAATRRAEALVGRAPAPH
EEEECCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKKLLRSDGVQAFLGWVLGTYLRIVLRTVRWRHENVACVEPVLSDQETGAIALFWHGRIP
CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEEECCCCC
LCLATAPQWWRKRTRCLVSPSADGEFIAQALSMSGFPAIRVSSAKKGDSAKARQAVAAIR
EEEECCCHHHHHHHEEEECCCCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHH
EATTWVAGGGALVVTPDGPRGPNEVIQAGALQIARRSGQPVFLMGIAANPAWQLEDTWDR
HHHHEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHH
VMFAAPFGRGAVVWEGPLHVPPDAGEAEIAALIENWSARLSAATRRAEALVGRAPAPH
EEEECCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]