| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is phoU [H]
Identifier: 197103972
GI number: 197103972
Start: 532228
End: 532923
Strand: Direct
Name: phoU [H]
Synonym: PHZ_c0506
Alternate gene names: 197103972
Gene position: 532228-532923 (Clockwise)
Preceding gene: 197103971
Following gene: 197103973
Centisome position: 13.32
GC content: 66.81
Gene sequence:
>696_bases ATGAACGAACACATCGTCAAGTCGTACGAGGAAGAGCTCAACGCCCTCACCGCCGAGACCACGCGGATGGGCGGACTGGC CGAGGCGGCCGTCGCCGACTGCCTGCTGGCGGTGGTCAAGCGCGACCAGGAGCTGGCCACCGCGGTCGTCGCGCGGGACG AGCGGCTGGACGTGGCCGAGCGCGACATCGAGCGGCGGGCGATCCGCCTGATCGCCCTGCGCCAGCCCATGGCCAACGAC CTGCGCAAGACGGTCGCGGCGATGAAGATCGCCAACAACCTCGAGCGCATCGGCGACCTGGCCAAGAACATCGCCAAGCG CACCCTGGTGATCATCGAGGAGGAGCCGATGACCCCGCTCACCCGCTCGATCGAGCGGATGGGCAAGCTGGTGCTGAACC GGCTCACCTCGGTCCTCGACGCCTACAGCCGCTCGGACATGGAGCGGGCCATGGCCGTCTGGTCCCAGGACGACGAGGTG GACGAGCACTACAACAGCCTCTTCCGCGAGCTGCTGACCTACATGATGGGCGATCCGCGGACGATCACCGCCTGCACGCA CATGCTGTTCGCGGCCAAGAACCTCGAGCGGATCGGCGACCACGCCACCAACATCGCCGAGCTCATCCACTACGAGATCA CGGGCGAGGAGATGATCTCCCAGGCCCGGCCGAAGACCGATCCACTGGAAGCCTGA
Upstream 100 bases:
>100_bases AAGCTGATCGAAGCCGGGAACACCGACGAGATCTTCACCAACCCGCGGGACTCCCGCACCCAGGACTACATCACCGGCCG GTTCGGCTGAGGGCCATCCC
Downstream 100 bases:
>100_bases CGGGGGCCGCTAAGTGACGACGCCACGCATACTGATCGTCGAGGACGAGGACTCGCTCGCGACGCTGCTTCAGTACAACC TCGAGAAGGAGGGCTACGAG
Product: phosphate transport regulon regulator PhoU
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MNEHIVKSYEEELNALTAETTRMGGLAEAAVADCLLAVVKRDQELATAVVARDERLDVAERDIERRAIRLIALRQPMAND LRKTVAAMKIANNLERIGDLAKNIAKRTLVIIEEEPMTPLTRSIERMGKLVLNRLTSVLDAYSRSDMERAMAVWSQDDEV DEHYNSLFRELLTYMMGDPRTITACTHMLFAAKNLERIGDHATNIAELIHYEITGEEMISQARPKTDPLEA
Sequences:
>Translated_231_residues MNEHIVKSYEEELNALTAETTRMGGLAEAAVADCLLAVVKRDQELATAVVARDERLDVAERDIERRAIRLIALRQPMAND LRKTVAAMKIANNLERIGDLAKNIAKRTLVIIEEEPMTPLTRSIERMGKLVLNRLTSVLDAYSRSDMERAMAVWSQDDEV DEHYNSLFRELLTYMMGDPRTITACTHMLFAAKNLERIGDHATNIAELIHYEITGEEMISQARPKTDPLEA >Mature_231_residues MNEHIVKSYEEELNALTAETTRMGGLAEAAVADCLLAVVKRDQELATAVVARDERLDVAERDIERRAIRLIALRQPMAND LRKTVAAMKIANNLERIGDLAKNIAKRTLVIIEEEPMTPLTRSIERMGKLVLNRLTSVLDAYSRSDMERAMAVWSQDDEV DEHYNSLFRELLTYMMGDPRTITACTHMLFAAKNLERIGDHATNIAELIHYEITGEEMISQARPKTDPLEA
Specific function: Not known; probably involved in phosphate transport and/or metabolism [H]
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoU family [H]
Homologues:
Organism=Escherichia coli, GI1790161, Length=218, Percent_Identity=36.2385321100917, Blast_Score=157, Evalue=7e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008170 [H]
Pfam domain/function: PF01895 PhoU [H]
EC number: NA
Molecular weight: Translated: 26108; Mature: 26108
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEHIVKSYEEELNALTAETTRMGGLAEAAVADCLLAVVKRDQELATAVVARDERLDVAE CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RDIERRAIRLIALRQPMANDLRKTVAAMKIANNLERIGDLAKNIAKRTLVIIEEEPMTPL HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHH TRSIERMGKLVLNRLTSVLDAYSRSDMERAMAVWSQDDEVDEHYNSLFRELLTYMMGDPR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCH TITACTHMLFAAKNLERIGDHATNIAELIHYEITGEEMISQARPKTDPLEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCC >Mature Secondary Structure MNEHIVKSYEEELNALTAETTRMGGLAEAAVADCLLAVVKRDQELATAVVARDERLDVAE CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RDIERRAIRLIALRQPMANDLRKTVAAMKIANNLERIGDLAKNIAKRTLVIIEEEPMTPL HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHH TRSIERMGKLVLNRLTSVLDAYSRSDMERAMAVWSQDDEVDEHYNSLFRELLTYMMGDPR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCH TITACTHMLFAAKNLERIGDHATNIAELIHYEITGEEMISQARPKTDPLEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10629178 [H]