Click here to switch to the map view.

The map label for this gene is yebA [C]

Identifier: 197103957

GI number: 197103957

Start: 516054

End: 517148

Strand: Reverse

Name: yebA [C]

Synonym: PHZ_c0491

Alternate gene names: 197103957

Gene position: 517148-516054 (Counterclockwise)

Preceding gene: 197103965

Following gene: 197103953

Centisome position: 12.94

GC content: 75.16

Gene sequence:

>1095_bases
ATGCGCCTAGCGCCACTTGCCGCCGCCGGCCTGGTCGTCGCCTGTACGCCGGCCGCCAGTGACGCGTCAGGCGGTGGGGC
GGGCCAGAGCGCCGCCTCGGGCCAGAGCGCCGCCGCCGAGCGGAACGCCGTCCCCGCTCAGACCGCCATCCCGGGCCAGG
GCCCGCGGTTCGGGCTGCCGATCGCCTGCACGCCCGGCCGGACCTGCGAGGTGCAGCACTACGTCGACCGCGACCCGGGA
CCGGGCGTGCGCGACTACCGCTGCGGCCGGCGGACCTACGACGGGCACAAGGGCGTCGATTTCCGTATCCCCGACATGGC
CGCCCAGCGGCGGGGCGTCGCGGTGCTGGCGGCTGCGCCGGGACGGGTCGCACGGCTGCGGGACGGCGTGGACGACGTCT
CCATCCGCCAGGACGGCGCCCCGCCGGTCGACGGGCGCGAGTGCGGCAACGGCGTCGTGATCGACCACGGCGGCGGCTGG
GAGACCCAGTACTGCCACCTGGCGCGCGGCAGCCTGCGCGTGAAGGTCGGGGACACGGTCGCTGCGGGCCAGCCCCTGGG
TCTGGTGGGCCTCTCCGGGGCGACGGAGTTCCCGCACCTGCACTTCCAGGTGCACCACGATGGGCGGGTGACCGATCCCT
GGGCGCCGGGCGCGGGTGACGGGTGCAACGCCGGGACTGGAACCGGGGCCGGCCCGAGCAGGCCCCTGTGGAGCGCGGAG
GTCGTGACGCAGACGCCCTACATGGCCGGCGCGGTGCTGAACCTGGGGTTCGCCGCGGGACCTGTGGCCATGGGGAACAT
CGAGGATGGCGCGATCGCCGCCCCCACCCGGAGCTCTCCCTACATCGTCGCCTACGGCCGCGGCATTGGTCTTCGCGGTG
GGGACGAGGTGGAGATCAGCCTTACCGGGCCGGGAGGCGCGGAGCTCGCCCGCGGCCGGCAGCCGCCGCTCGACCGCGAC
AAGGCCCAGTACATGGCCTACGCGGGCAAGAAGCGGCCCGCGGACGGCTGGCCGGCGGGCGCCTACACGGCGCGGATGCG
AGTCTATCGGGAAGGACGGGTCGCGCTGGAGCGCAGCGTCTCGATGCGGCTCTGA

Upstream 100 bases:

>100_bases
CCGTTCTAGCATCATCGGGCGCGCTGGGGGCCAGCCCGTGTCACATTTTGGCCGGGGCTGCGACCAACGCTGCCCGGCCG
TCACTTCAGGGAGGTCACAC

Downstream 100 bases:

>100_bases
GCAGCGGACATTATGGCCAAGTTAACCGACACGTGATCCGGGAATCCCTTTCGCGCGGTCGAGCTTTCGGCTAAACTTCT
GTGTCAGCCTAGCTCTCCAT

Product: peptidase

Products: NA

Alternate protein names: Peptidase M; Periplasmic Protein; M23 Family Peptidase; M23 Peptidase Domain Protein; M24/M37 Family Peptidase

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MRLAPLAAAGLVVACTPAASDASGGGAGQSAASGQSAAAERNAVPAQTAIPGQGPRFGLPIACTPGRTCEVQHYVDRDPG
PGVRDYRCGRRTYDGHKGVDFRIPDMAAQRRGVAVLAAAPGRVARLRDGVDDVSIRQDGAPPVDGRECGNGVVIDHGGGW
ETQYCHLARGSLRVKVGDTVAAGQPLGLVGLSGATEFPHLHFQVHHDGRVTDPWAPGAGDGCNAGTGTGAGPSRPLWSAE
VVTQTPYMAGAVLNLGFAAGPVAMGNIEDGAIAAPTRSSPYIVAYGRGIGLRGGDEVEISLTGPGGAELARGRQPPLDRD
KAQYMAYAGKKRPADGWPAGAYTARMRVYREGRVALERSVSMRL

Sequences:

>Translated_364_residues
MRLAPLAAAGLVVACTPAASDASGGGAGQSAASGQSAAAERNAVPAQTAIPGQGPRFGLPIACTPGRTCEVQHYVDRDPG
PGVRDYRCGRRTYDGHKGVDFRIPDMAAQRRGVAVLAAAPGRVARLRDGVDDVSIRQDGAPPVDGRECGNGVVIDHGGGW
ETQYCHLARGSLRVKVGDTVAAGQPLGLVGLSGATEFPHLHFQVHHDGRVTDPWAPGAGDGCNAGTGTGAGPSRPLWSAE
VVTQTPYMAGAVLNLGFAAGPVAMGNIEDGAIAAPTRSSPYIVAYGRGIGLRGGDEVEISLTGPGGAELARGRQPPLDRD
KAQYMAYAGKKRPADGWPAGAYTARMRVYREGRVALERSVSMRL
>Mature_364_residues
MRLAPLAAAGLVVACTPAASDASGGGAGQSAASGQSAAAERNAVPAQTAIPGQGPRFGLPIACTPGRTCEVQHYVDRDPG
PGVRDYRCGRRTYDGHKGVDFRIPDMAAQRRGVAVLAAAPGRVARLRDGVDDVSIRQDGAPPVDGRECGNGVVIDHGGGW
ETQYCHLARGSLRVKVGDTVAAGQPLGLVGLSGATEFPHLHFQVHHDGRVTDPWAPGAGDGCNAGTGTGAGPSRPLWSAE
VVTQTPYMAGAVLNLGFAAGPVAMGNIEDGAIAAPTRSSPYIVAYGRGIGLRGGDEVEISLTGPGGAELARGRQPPLDRD
KAQYMAYAGKKRPADGWPAGAYTARMRVYREGRVALERSVSMRL

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.24.- [C]

Molecular weight: Translated: 37516; Mature: 37516

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLAPLAAAGLVVACTPAASDASGGGAGQSAASGQSAAAERNAVPAQTAIPGQGPRFGLP
CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCC
IACTPGRTCEVQHYVDRDPGPGVRDYRCGRRTYDGHKGVDFRIPDMAAQRRGVAVLAAAP
EEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHCCCEEEEEECC
GRVARLRDGVDDVSIRQDGAPPVDGRECGNGVVIDHGGGWETQYCHLARGSLRVKVGDTV
CCHHHHHCCCCCCEEECCCCCCCCCHHCCCCEEEECCCCCCCEEEEEECCEEEEEECCEE
AAGQPLGLVGLSGATEFPHLHFQVHHDGRVTDPWAPGAGDGCNAGTGTGAGPSRPLWSAE
ECCCCCEEEEECCCCCCCEEEEEEECCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
VVTQTPYMAGAVLNLGFAAGPVAMGNIEDGAIAAPTRSSPYIVAYGRGIGLRGGDEVEIS
HEECCCCHHHHHHHCCCCCCCEEECCCCCCEEECCCCCCCEEEEECCCCCCCCCCEEEEE
LTGPGGAELARGRQPPLDRDKAQYMAYAGKKRPADGWPAGAYTARMRVYREGRVALERSV
EECCCCHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHEEEEEECCCCEEEECHH
SMRL
CCCC
>Mature Secondary Structure
MRLAPLAAAGLVVACTPAASDASGGGAGQSAASGQSAAAERNAVPAQTAIPGQGPRFGLP
CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCC
IACTPGRTCEVQHYVDRDPGPGVRDYRCGRRTYDGHKGVDFRIPDMAAQRRGVAVLAAAP
EEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHCCCEEEEEECC
GRVARLRDGVDDVSIRQDGAPPVDGRECGNGVVIDHGGGWETQYCHLARGSLRVKVGDTV
CCHHHHHCCCCCCEEECCCCCCCCCHHCCCCEEEECCCCCCCEEEEEECCEEEEEECCEE
AAGQPLGLVGLSGATEFPHLHFQVHHDGRVTDPWAPGAGDGCNAGTGTGAGPSRPLWSAE
ECCCCCEEEEECCCCCCCEEEEEEECCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
VVTQTPYMAGAVLNLGFAAGPVAMGNIEDGAIAAPTRSSPYIVAYGRGIGLRGGDEVEIS
HEECCCCHHHHHHHCCCCCCCEEECCCCCCEEECCCCCCCEEEEECCCCCCCCCCEEEEE
LTGPGGAELARGRQPPLDRDKAQYMAYAGKKRPADGWPAGAYTARMRVYREGRVALERSV
EECCCCHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHEEEEEECCCCEEEECHH
SMRL
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA