| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197103949
Identifier: 197103949
GI number: 197103949
Start: 503635
End: 505377
Strand: Reverse
Name: 197103949
Synonym: PHZ_c0483
Alternate gene names: NA
Gene position: 505377-503635 (Counterclockwise)
Preceding gene: 197103953
Following gene: 197103948
Centisome position: 12.65
GC content: 75.39
Gene sequence:
>1743_bases GTGCATGGCGTGCGGATCGTCCTCGCTGGCCACGGCCCGCCGGAAGGTCGCCGGAGCGGCGGGATCGGCCTGGCCGCCCA GGTGGGTGAAGGCGTAGCGGCGGTCGCCCTCGAACCGCTGCGCCAGTTCGCGGAAGATCGGCCAGCCCTTCAGCGGGGTC GGCATGCCCAGGTAGGCCACGCGGAACGGCCCCGACTTGCGCGCCGGCGGGGCGGGGCCGCGGTCCACGAGGCGCGCGTG CGGCAGGACGACCTCGCCCGCCACCGGGTGGTCCCAGCCGGCGCGCCAGAACGCCAGCGTCGTCTCGGAGGGGGCGACGA CGGTGATCTCCAGGGCCTCGAACAGCCGCCGGTGCGCCGCCAGGTGCCGGCCGCGCCAGGGACCGTAGGCGCAGATGCCG CAGGCGGCGCTGTCCGGCGGCGGGGCCGCGCAGTCCTCCACGTCGTTGCGCAGCAGGTGATAGCCCGCGCACAGGCTCGC GAAGTCATGCAGCCAGAAGAAGCCCCGGGTCATGCCGAGGCCGCGGAGCAGGGCCGCCGTCTCGTCGGGATCGTGGCCCA GCAGGCTGTGGATCGCGAAGCTGCGCCGCCCCCTGCCGCGCCCGCCCGCCCGGCCCAGGGCCTCCGCCACCGCGGCGGCG GAATAGACGCCCAGCCGCCGGCCGTTCAGCAGCACGCCGAGCGGCCCCGGCTCGCCTGCCGCCCGCACCATCGGCCAGGG CTTGGCCGGATGCAGGTGCAGGTGGTCCACGCCGAGCGCGGCGAAGCGGGCGCCCTCGCGCCGCAGGCAGAGCTGCATGC CGCCGATGCTCGCGGTCGGGTCGTCGTGGCTGAAGGTCACGTGCAGGTCGGCGAGCCGGGCGCCGGTGTCGGCGATCGCC CGCGCGAGGGCCTCGGCGGCCCCGGTCCGCGCCGCGGCGGACGCCCGGATCGCCGCCTCCAGCCGGGCTTCCACCGGGGT CTGGCGGGCGATGACGTCGTAGCGGAACCCGAGCTCGTGACGGCCGATCCGGCCCTCGGCGCGGCCGGCGGTCAGGTAGT GGGCGAAGGGGTTCACCTCGGCCTGGGCGACGTCCGGATAGAGCTCGAGGTAGTCGCGCACCGAGAAGCGGGGGCTGGGA TCGCGCCCCTCGCGCCAGCCGGTGATCAGGAAGTGGTGCAGCGGGTCGGTCCCCGCCGCGGCGATGTCGGGGTTGTGGGC CAGGTACCACTCGGCGTCGAACTCCGGCTCGACGACGGCGCGGTCGGCGGTGGCGTTGAACACCGGCCGCGGACGCGCCT TCGGCGCCGTGGCGAGCAGCGCCTCCAGGCTCCACGGCGCCGGGGCCCCGAGCGTCCCCGTCAGCCACGCCTCGGCGTGA GCGGAGGCGCGGACCTCGCGCCCTTCCGCTCGGCCCCGCGTGAGGAAATGGAAGAAGGGCTCGGCGCCCGACCGGGCCAC GTCGGGATGGGCCTCCAGATAGGCCTCGGTGGAGAACCAGGGCGCCGGGTCGCGCCCCTCGCGCCAGCCGGTGAGCACGT AGTGCTTCAGCGGGTCCTGGGAGGGATCGGCCAGATCGGGATAGACCGCCCGGTGGAAGGCCGCGTCGAACGCCGTGGAG ACAACCCTGTGGACTTCGTCAACTTGGGCCGGGACGGCCATCGGGCGCAGGTTCCTGAAGCGGCGGCGGCGGGCTGGTGT GCAACAGAAGGGCGTGCCGATCAACCGCCGCCGGAACTTGCAGCCTCGGCCGGGCGCCCGTAA
Upstream 100 bases:
>100_bases CAGCGCCGGCGGCCGCCGCCTCGTAGGCGGTGAACGAGAACGTCTCGCGGCAAAGCGGCCAGACGAGGGCGGCGTCGGGC TGCACGGCCTCCAGCGCCGC
Downstream 100 bases:
>100_bases GGGCGAGGGGGCATGACGGGCGGCGAAGCATCGGGAAGCAGGACCGGCGGCGAGCGGACCGCCTACCTCGTGCTGGGCAT GCACCGCTCGGGCACCTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 580; Mature: 580
Protein sequence:
>580_residues MHGVRIVLAGHGPPEGRRSGGIGLAAQVGEGVAAVALEPLRQFAEDRPALQRGRHAQVGHAERPRLARRRGGAAVHEARV RQDDLARHRVVPAGAPERQRRLGGGDDGDLQGLEQPPVRRQVPAAPGTVGADAAGGAVRRRGRAVLHVVAQQVIARAQAR EVMQPEEAPGHAEAAEQGRRLVGIVAQQAVDREAAPPPAAPARPAQGLRHRGGGIDAQPPAVQQHAERPRLACRPHHRPG LGRMQVQVVHAERGEAGALAPQAELHAADARGRVVVAEGHVQVGEPGAGVGDRPREGLGGPGPRRGGRPDRRLQPGFHRG LAGDDVVAEPELVTADPALGAAGGQVVGEGVHLGLGDVRIELEVVAHREAGAGIAPLAPAGDQEVVQRVGPRRGDVGVVG QVPLGVELRLDDGAVGGGVEHRPRTRLRRRGEQRLQAPRRRGPERPRQPRLGVSGGADLAPFRSAPREEMEEGLGARPGH VGMGLQIGLGGEPGRRVAPLAPAGEHVVLQRVLGGIGQIGIDRPVEGRVERRGDNPVDFVNLGRDGHRAQVPEAAAAGWC ATEGRADQPPPELAASAGRP
Sequences:
>Translated_580_residues MHGVRIVLAGHGPPEGRRSGGIGLAAQVGEGVAAVALEPLRQFAEDRPALQRGRHAQVGHAERPRLARRRGGAAVHEARV RQDDLARHRVVPAGAPERQRRLGGGDDGDLQGLEQPPVRRQVPAAPGTVGADAAGGAVRRRGRAVLHVVAQQVIARAQAR EVMQPEEAPGHAEAAEQGRRLVGIVAQQAVDREAAPPPAAPARPAQGLRHRGGGIDAQPPAVQQHAERPRLACRPHHRPG LGRMQVQVVHAERGEAGALAPQAELHAADARGRVVVAEGHVQVGEPGAGVGDRPREGLGGPGPRRGGRPDRRLQPGFHRG LAGDDVVAEPELVTADPALGAAGGQVVGEGVHLGLGDVRIELEVVAHREAGAGIAPLAPAGDQEVVQRVGPRRGDVGVVG QVPLGVELRLDDGAVGGGVEHRPRTRLRRRGEQRLQAPRRRGPERPRQPRLGVSGGADLAPFRSAPREEMEEGLGARPGH VGMGLQIGLGGEPGRRVAPLAPAGEHVVLQRVLGGIGQIGIDRPVEGRVERRGDNPVDFVNLGRDGHRAQVPEAAAAGWC ATEGRADQPPPELAASAGRP >Mature_580_residues MHGVRIVLAGHGPPEGRRSGGIGLAAQVGEGVAAVALEPLRQFAEDRPALQRGRHAQVGHAERPRLARRRGGAAVHEARV RQDDLARHRVVPAGAPERQRRLGGGDDGDLQGLEQPPVRRQVPAAPGTVGADAAGGAVRRRGRAVLHVVAQQVIARAQAR EVMQPEEAPGHAEAAEQGRRLVGIVAQQAVDREAAPPPAAPARPAQGLRHRGGGIDAQPPAVQQHAERPRLACRPHHRPG LGRMQVQVVHAERGEAGALAPQAELHAADARGRVVVAEGHVQVGEPGAGVGDRPREGLGGPGPRRGGRPDRRLQPGFHRG LAGDDVVAEPELVTADPALGAAGGQVVGEGVHLGLGDVRIELEVVAHREAGAGIAPLAPAGDQEVVQRVGPRRGDVGVVG QVPLGVELRLDDGAVGGGVEHRPRTRLRRRGEQRLQAPRRRGPERPRQPRLGVSGGADLAPFRSAPREEMEEGLGARPGH VGMGLQIGLGGEPGRRVAPLAPAGEHVVLQRVLGGIGQIGIDRPVEGRVERRGDNPVDFVNLGRDGHRAQVPEAAAAGWC ATEGRADQPPPELAASAGRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60483; Mature: 60483
Theoretical pI: Translated: 11.64; Mature: 11.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHGVRIVLAGHGPPEGRRSGGIGLAAQVGEGVAAVALEPLRQFAEDRPALQRGRHAQVGH CCCEEEEEECCCCCCCCCCCCCEEHHHHCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCC AERPRLARRRGGAAVHEARVRQDDLARHRVVPAGAPERQRRLGGGDDGDLQGLEQPPVRR CCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCC QVPAAPGTVGADAAGGAVRRRGRAVLHVVAQQVIARAQAREVMQPEEAPGHAEAAEQGRR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCH LVGIVAQQAVDREAAPPPAAPARPAQGLRHRGGGIDAQPPAVQQHAERPRLACRPHHRPG HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCC LGRMQVQVVHAERGEAGALAPQAELHAADARGRVVVAEGHVQVGEPGAGVGDRPREGLGG CCCEEEEEEECCCCCCCCCCCHHHHHHCCCCCCEEEEECCEEECCCCCCCCCCCCCCCCC PGPRRGGRPDRRLQPGFHRGLAGDDVVAEPELVTADPALGAAGGQVVGEGVHLGLGDVRI CCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEECCCCCCCCCCCEECCCEEECCCCEEE ELEVVAHREAGAGIAPLAPAGDQEVVQRVGPRRGDVGVVGQVPLGVELRLDDGAVGGGVE EEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEECCCCCEEEEECCCCCCCCCC HRPRTRLRRRGEQRLQAPRRRGPERPRQPRLGVSGGADLAPFRSAPREEMEEGLGARPGH CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHCCCCCCCC VGMGLQIGLGGEPGRRVAPLAPAGEHVVLQRVLGGIGQIGIDRPVEGRVERRGDNPVDFV CCCEEEECCCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCEE NLGRDGHRAQVPEAAAAGWCATEGRADQPPPELAASAGRP ECCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHCCCCC >Mature Secondary Structure MHGVRIVLAGHGPPEGRRSGGIGLAAQVGEGVAAVALEPLRQFAEDRPALQRGRHAQVGH CCCEEEEEECCCCCCCCCCCCCEEHHHHCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCC AERPRLARRRGGAAVHEARVRQDDLARHRVVPAGAPERQRRLGGGDDGDLQGLEQPPVRR CCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCC QVPAAPGTVGADAAGGAVRRRGRAVLHVVAQQVIARAQAREVMQPEEAPGHAEAAEQGRR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCH LVGIVAQQAVDREAAPPPAAPARPAQGLRHRGGGIDAQPPAVQQHAERPRLACRPHHRPG HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCC LGRMQVQVVHAERGEAGALAPQAELHAADARGRVVVAEGHVQVGEPGAGVGDRPREGLGG CCCEEEEEEECCCCCCCCCCCHHHHHHCCCCCCEEEEECCEEECCCCCCCCCCCCCCCCC PGPRRGGRPDRRLQPGFHRGLAGDDVVAEPELVTADPALGAAGGQVVGEGVHLGLGDVRI CCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEECCCCCCCCCCCEECCCEEECCCCEEE ELEVVAHREAGAGIAPLAPAGDQEVVQRVGPRRGDVGVVGQVPLGVELRLDDGAVGGGVE EEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEECCCCCEEEEECCCCCCCCCC HRPRTRLRRRGEQRLQAPRRRGPERPRQPRLGVSGGADLAPFRSAPREEMEEGLGARPGH CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHCCCCCCCC VGMGLQIGLGGEPGRRVAPLAPAGEHVVLQRVLGGIGQIGIDRPVEGRVERRGDNPVDFV CCCEEEECCCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCEE NLGRDGHRAQVPEAAAAGWCATEGRADQPPPELAASAGRP ECCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA