| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197103948
Identifier: 197103948
GI number: 197103948
Start: 502558
End: 503622
Strand: Reverse
Name: 197103948
Synonym: PHZ_c0482
Alternate gene names: NA
Gene position: 503622-502558 (Counterclockwise)
Preceding gene: 197103949
Following gene: 197103947
Centisome position: 12.6
GC content: 75.31
Gene sequence:
>1065_bases ATGACGGGCGGCGAAGCATCGGGAAGCAGGACCGGCGGCGAGCGGACCGCCTACCTCGTGCTGGGCATGCACCGCTCGGG CACCTCGGCGGTGACCCAGCTGCTGTCGCTGGCCGGGGCCAGGCTGCCCGCCAACGTCATGCCGGGCGACGAGTACAACC AGCAGGGCTATTTCGAGCCCTGGAAGATCGCCATCCTGAACGACGAGCGCCTGCGCGCCGCGGGTTCGGCCTGGGACGAC GGCTTCGCCTTTCCCTTCCGCCCGCTGGCCGCCGACGACGAGGCCCTCTGGAGCGAGCGGGCCCGCGCCCTGTTCGCCGA GGAGTACGGCCGCGTCCGCCACCCGCTGATGAAGGATCCGCGGGTCACCGTGCTGCTGCCGTTCTGGCGCAAGGTGCTGG AGCGGCAGGGCGTCGGCGCGCGATGCGTCATCCCCGTGCGCCATCCGCTGGCCGTCGCCGGCTCGCTGCAGCGGCGGGAC GGCTTCCCGCCCGAGAAGTCGGTGCTGGTCTGGACCGCCTACATGCTGGCGGCCGAGGCCTACACCCGCGACCTGCCCCG GGGCTTCGTGGCCTATGACGCCCTGCTCGCCGACTGGCGCGGCCAGGTGGCGCGCATCGAGGCGGCGCACGGCGCGCCCC TGCCCAAGCTCGACGAGAAGGCCGCGCGCCGGATCGACCAGGCGCTGAGCCCCGACCTGCGCCACAACGCCGGCGGGGGC GACCTTTCCGGCCTCGGCTGGAGCGGGGATCTGGCGGCCCGGGTGCTGGACTGGTTCGAGGCCGCCGCCCGCGACGCGCG GCCGGCGCGCCGGATCCTGGACGAGGCCGCCGCCGAGATGGGCCGCCGGGCCGCCGAGATGGGACCGCTGGTCTCCCCCG CCGCTCGCGACCTCGACGTCGCCCGCACGGGCCTGATCGAGGCCCGGCGCCGGGCCGAGCACCTGGAGGACGTCCTCACC CGCCAGCAACCGGACCTCGAGGCCGGCTGGCGCGCGCGGAACGCCCTGGCTGCCGTCGAGGCCGAGCTCGACGCCGCGCT CGCCGGCGAGGACCCCAAGTCGTGA
Upstream 100 bases:
>100_bases TGAAGCGGCGGCGGCGGGCTGGTGTGCAACAGAAGGGCGTGCCGATCAACCGCCGCCGGAACTTGCAGCCTCGGCCGGGC GCCCGTAAGGGCGAGGGGGC
Downstream 100 bases:
>100_bases GCCCGCGGCCCGGCGACGTCGAGGCGCGGCTGCAGCGCTTCCCGAAGGCCCGCCCGCCGCTGCCGCCGCGGCTGCAGGAG ATCTACGCCCGCCAGTACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MTGGEASGSRTGGERTAYLVLGMHRSGTSAVTQLLSLAGARLPANVMPGDEYNQQGYFEPWKIAILNDERLRAAGSAWDD GFAFPFRPLAADDEALWSERARALFAEEYGRVRHPLMKDPRVTVLLPFWRKVLERQGVGARCVIPVRHPLAVAGSLQRRD GFPPEKSVLVWTAYMLAAEAYTRDLPRGFVAYDALLADWRGQVARIEAAHGAPLPKLDEKAARRIDQALSPDLRHNAGGG DLSGLGWSGDLAARVLDWFEAAARDARPARRILDEAAAEMGRRAAEMGPLVSPAARDLDVARTGLIEARRRAEHLEDVLT RQQPDLEAGWRARNALAAVEAELDAALAGEDPKS
Sequences:
>Translated_354_residues MTGGEASGSRTGGERTAYLVLGMHRSGTSAVTQLLSLAGARLPANVMPGDEYNQQGYFEPWKIAILNDERLRAAGSAWDD GFAFPFRPLAADDEALWSERARALFAEEYGRVRHPLMKDPRVTVLLPFWRKVLERQGVGARCVIPVRHPLAVAGSLQRRD GFPPEKSVLVWTAYMLAAEAYTRDLPRGFVAYDALLADWRGQVARIEAAHGAPLPKLDEKAARRIDQALSPDLRHNAGGG DLSGLGWSGDLAARVLDWFEAAARDARPARRILDEAAAEMGRRAAEMGPLVSPAARDLDVARTGLIEARRRAEHLEDVLT RQQPDLEAGWRARNALAAVEAELDAALAGEDPKS >Mature_353_residues TGGEASGSRTGGERTAYLVLGMHRSGTSAVTQLLSLAGARLPANVMPGDEYNQQGYFEPWKIAILNDERLRAAGSAWDDG FAFPFRPLAADDEALWSERARALFAEEYGRVRHPLMKDPRVTVLLPFWRKVLERQGVGARCVIPVRHPLAVAGSLQRRDG FPPEKSVLVWTAYMLAAEAYTRDLPRGFVAYDALLADWRGQVARIEAAHGAPLPKLDEKAARRIDQALSPDLRHNAGGGD LSGLGWSGDLAARVLDWFEAAARDARPARRILDEAAAEMGRRAAEMGPLVSPAARDLDVARTGLIEARRRAEHLEDVLTR QQPDLEAGWRARNALAAVEAELDAALAGEDPKS
Specific function: Unknown
COG id: COG3551
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38654; Mature: 38523
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGGEASGSRTGGERTAYLVLGMHRSGTSAVTQLLSLAGARLPANVMPGDEYNQQGYFEP CCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC WKIAILNDERLRAAGSAWDDGFAFPFRPLAADDEALWSERARALFAEEYGRVRHPLMKDP EEEEEECCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC RVTVLLPFWRKVLERQGVGARCVIPVRHPLAVAGSLQRRDGFPPEKSVLVWTAYMLAAEA CEEEEHHHHHHHHHHCCCCCEEEEECCCCHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHH YTRDLPRGFVAYDALLADWRGQVARIEAAHGAPLPKLDEKAARRIDQALSPDLRHNAGGG HHHHCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHCCCCCC DLSGLGWSGDLAARVLDWFEAAARDARPARRILDEAAAEMGRRAAEMGPLVSPAARDLDV CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH ARTGLIEARRRAEHLEDVLTRQQPDLEAGWRARNALAAVEAELDAALAGEDPKS HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TGGEASGSRTGGERTAYLVLGMHRSGTSAVTQLLSLAGARLPANVMPGDEYNQQGYFEP CCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC WKIAILNDERLRAAGSAWDDGFAFPFRPLAADDEALWSERARALFAEEYGRVRHPLMKDP EEEEEECCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC RVTVLLPFWRKVLERQGVGARCVIPVRHPLAVAGSLQRRDGFPPEKSVLVWTAYMLAAEA CEEEEHHHHHHHHHHCCCCCEEEEECCCCHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHH YTRDLPRGFVAYDALLADWRGQVARIEAAHGAPLPKLDEKAARRIDQALSPDLRHNAGGG HHHHCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHCCCCCC DLSGLGWSGDLAARVLDWFEAAARDARPARRILDEAAAEMGRRAAEMGPLVSPAARDLDV CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH ARTGLIEARRRAEHLEDVLTRQQPDLEAGWRARNALAAVEAELDAALAGEDPKS HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA