Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is 197103937

Identifier: 197103937

GI number: 197103937

Start: 488530

End: 490362

Strand: Reverse

Name: 197103937

Synonym: PHZ_c0471

Alternate gene names: NA

Gene position: 490362-488530 (Counterclockwise)

Preceding gene: 197103941

Following gene: 197103935

Centisome position: 12.27

GC content: 72.78

Gene sequence:

>1833_bases
GTGATCGATCTGGCGGGTCTCGAGCGGGCGGCCTTCAATCGGGAGCCGGACCGCTGGGCCAAGGCGGTGGACGCGCTCCG
GGCGCTGCTCCAATCCGGCGCGCCATCCACGCCCGCGGAGGCGGCGCGCCTGGCGACGGCGCTGGCCACGATCATCGCCG
ATCCGGCGGCCCCGCCCACCGTCGACCAGTTCCAGCAGGCCCTGCTCTTCCGCCAGGAGCTGGAGACCCTCGTCCGCGCC
AGCCCGCTGGGCTCGCTCGACCATGTGCTCCGCGCCATGGGCCTGCAGCCGCGGGGCGGGACGCCGGCCGCGGGGGCGGT
GGATCCGCAGCGGCTGGCGAAGGCCTGCCTGCTGCTCACCCTCGATTCCGACGTGGAGTTCGGTCCCGACGACCTCCTGA
CCCTCCCGCCCGAGCTGGCCCAGACCGCCTACATCAGCCTGGTGGGGTCCAAGCCGGTGGTCTCGGCCCTGGGCGCCGAG
CGGCGGGAGGCCTTCCTCGACCGCGCCGAGGCGCTGCGGCCCGCGCCGTTGCCGCCGACGCTGAACCACCTGGTCGCCCT
CAGCACCGCCTGGATGCTGTGCAGCTACGCCAGCCACCCGCGCAAGCACGCCCTCAAGGCCGTGCTCAACCGCACGCTGG
TCGACCTGGCCGGCCGCATCCGGATCCAGGCGCCGGCGCTCCCGGCCGTCCGCACGCTGAAGGACCGGCCGCGGATGCTG
GTGGCGGCCGAGATCATGCACTCCAACCACGTGCAGTTCCGCTACTTCGGCCAGTACCTGCGCCAGCTGCGCGAGCGGTT
CGAGCTCGTCCTGGTGACCGAGGACACCGAGGCCGACCCCGCGGTCCGGCCGCTGTTCGACGAGGTCCACACCTTCCGCC
GGGCCGGCGGCGGCGCGCACCTGGGCGAGATCGCCCGGCGGATGACCGAGGCCGAACCGGACATCGTCTTCTGGCCCAGC
GTGGGAATGCGGCACTGGGGACCGCTGCTGGCCAACCTGCGCTTCGCCCCGATCCAGATGACGGCGCTGGGCCACTCGGC
GTCCACGTTCTGCCCGGCGATCGACTACTACCTGACCGAGGAAGGCTACGTCTCGGACCCCGCCCTGTTCGGCGAGCGGC
TGCTGCTGCTGCCGGACGAGTCGCTCGTGTTCGAACGCTCGCCGCACTACACGCCCGTGCCGCCCGACATCCGCGAGACC
GCGCGGCCGCTGCGGGTGGCCCTGCCCAGCAACCTCCTCAAGCTCAACCCCGGCTTCATCGCGCTGCTGGCGCGGATCCG
CGCCGCGGCCGGCCGCGAGCTCGAGTTCCACGTCTTCCCCAATGTGGGCGGCTCCGAGCTGCAGGCCATCCGCCAGACCC
TGGAGCGTGCGCTGCCGGGGGCGCAGGTCCACGGCCTCATGGCCTACAACCGCTACCTTGAGCTCCTGTCCGCCTGCGAC
CTGAACCTCAGTCCCTTCCCGTTCGGCGGCCTGCACAGCGTCATCGATTCGCTGCGCCAGGGACTGCCGGTCGTGGCCAT
GGAGTGTCCCGAGCCGCATGGGCGGACCGACGCCATGCTGCTGCGCCGCCTCGGCATGCCGGAGTGGCTGATCGCCCGGG
ACGAGGACGCCTACGTGGCCGCGGCGCTGAAGGTGATCGACGACGACGCCGTCCGCGTGGCGCTCGGCCGCCAGGCGCTG
GACCTCGACATCGACCGGCTGATGTTCGGCGACGCCACCACGCCGCTGCGCTCCGAGGTCGTGGACGCCGTCTGGTGGGC
CTATCGCCACCACGACGAGGTGGCAGCCGCGGACCGCAGGGTGATCCGGCCGAAGGATTGGGCGGCGGGGTAG

Upstream 100 bases:

>100_bases
GTTCCGGAAAAGCCCCAAGGCGTGCGGCTTGGCCTGGCCGCCGCACCCCTTTAAACCCGCCGCCGAGGCTCCTTCCGGGG
CCACCGGAGGGGGCGTGGGC

Downstream 100 bases:

>100_bases
CCTACCGCGACAGGCGCTGGGCGGCTTCGGCCATCGCCGCGCCCAGGCGCGCCTGCCCCTCGGCGGCGATGTGCAGTCCG
TCGGCCTGGCGCGGAAGCGG

Product: putative accessory processing protein

Products: NA

Alternate protein names: Adhesin Processing HmwC-Like Protein; O-Linked N-Acetylglucosamine Transferase; Adhesin Processing Protein; Glycosyltransferase

Number of amino acids: Translated: 610; Mature: 610

Protein sequence:

>610_residues
MIDLAGLERAAFNREPDRWAKAVDALRALLQSGAPSTPAEAARLATALATIIADPAAPPTVDQFQQALLFRQELETLVRA
SPLGSLDHVLRAMGLQPRGGTPAAGAVDPQRLAKACLLLTLDSDVEFGPDDLLTLPPELAQTAYISLVGSKPVVSALGAE
RREAFLDRAEALRPAPLPPTLNHLVALSTAWMLCSYASHPRKHALKAVLNRTLVDLAGRIRIQAPALPAVRTLKDRPRML
VAAEIMHSNHVQFRYFGQYLRQLRERFELVLVTEDTEADPAVRPLFDEVHTFRRAGGGAHLGEIARRMTEAEPDIVFWPS
VGMRHWGPLLANLRFAPIQMTALGHSASTFCPAIDYYLTEEGYVSDPALFGERLLLLPDESLVFERSPHYTPVPPDIRET
ARPLRVALPSNLLKLNPGFIALLARIRAAAGRELEFHVFPNVGGSELQAIRQTLERALPGAQVHGLMAYNRYLELLSACD
LNLSPFPFGGLHSVIDSLRQGLPVVAMECPEPHGRTDAMLLRRLGMPEWLIARDEDAYVAAALKVIDDDAVRVALGRQAL
DLDIDRLMFGDATTPLRSEVVDAVWWAYRHHDEVAAADRRVIRPKDWAAG

Sequences:

>Translated_610_residues
MIDLAGLERAAFNREPDRWAKAVDALRALLQSGAPSTPAEAARLATALATIIADPAAPPTVDQFQQALLFRQELETLVRA
SPLGSLDHVLRAMGLQPRGGTPAAGAVDPQRLAKACLLLTLDSDVEFGPDDLLTLPPELAQTAYISLVGSKPVVSALGAE
RREAFLDRAEALRPAPLPPTLNHLVALSTAWMLCSYASHPRKHALKAVLNRTLVDLAGRIRIQAPALPAVRTLKDRPRML
VAAEIMHSNHVQFRYFGQYLRQLRERFELVLVTEDTEADPAVRPLFDEVHTFRRAGGGAHLGEIARRMTEAEPDIVFWPS
VGMRHWGPLLANLRFAPIQMTALGHSASTFCPAIDYYLTEEGYVSDPALFGERLLLLPDESLVFERSPHYTPVPPDIRET
ARPLRVALPSNLLKLNPGFIALLARIRAAAGRELEFHVFPNVGGSELQAIRQTLERALPGAQVHGLMAYNRYLELLSACD
LNLSPFPFGGLHSVIDSLRQGLPVVAMECPEPHGRTDAMLLRRLGMPEWLIARDEDAYVAAALKVIDDDAVRVALGRQAL
DLDIDRLMFGDATTPLRSEVVDAVWWAYRHHDEVAAADRRVIRPKDWAAG
>Mature_610_residues
MIDLAGLERAAFNREPDRWAKAVDALRALLQSGAPSTPAEAARLATALATIIADPAAPPTVDQFQQALLFRQELETLVRA
SPLGSLDHVLRAMGLQPRGGTPAAGAVDPQRLAKACLLLTLDSDVEFGPDDLLTLPPELAQTAYISLVGSKPVVSALGAE
RREAFLDRAEALRPAPLPPTLNHLVALSTAWMLCSYASHPRKHALKAVLNRTLVDLAGRIRIQAPALPAVRTLKDRPRML
VAAEIMHSNHVQFRYFGQYLRQLRERFELVLVTEDTEADPAVRPLFDEVHTFRRAGGGAHLGEIARRMTEAEPDIVFWPS
VGMRHWGPLLANLRFAPIQMTALGHSASTFCPAIDYYLTEEGYVSDPALFGERLLLLPDESLVFERSPHYTPVPPDIRET
ARPLRVALPSNLLKLNPGFIALLARIRAAAGRELEFHVFPNVGGSELQAIRQTLERALPGAQVHGLMAYNRYLELLSACD
LNLSPFPFGGLHSVIDSLRQGLPVVAMECPEPHGRTDAMLLRRLGMPEWLIARDEDAYVAAALKVIDDDAVRVALGRQAL
DLDIDRLMFGDATTPLRSEVVDAVWWAYRHHDEVAAADRRVIRPKDWAAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67129; Mature: 67129

Theoretical pI: Translated: 6.47; Mature: 6.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDLAGLERAAFNREPDRWAKAVDALRALLQSGAPSTPAEAARLATALATIIADPAAPPT
CCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
VDQFQQALLFRQELETLVRASPLGSLDHVLRAMGLQPRGGTPAAGAVDPQRLAKACLLLT
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHEEEE
LDSDVEFGPDDLLTLPPELAQTAYISLVGSKPVVSALGAERREAFLDRAEALRPAPLPPT
ECCCCCCCCCCCEECCHHHHHHHHHHEECCCHHHHHHCHHHHHHHHHHHHHCCCCCCCHH
LNHLVALSTAWMLCSYASHPRKHALKAVLNRTLVDLAGRIRIQAPALPAVRTLKDRPRML
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHCCCCHH
VAAEIMHSNHVQFRYFGQYLRQLRERFELVLVTEDTEADPAVRPLFDEVHTFRRAGGGAH
HHHHHHHCCCCHHHHHHHHHHHHHHHCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCH
LGEIARRMTEAEPDIVFWPSVGMRHWGPLLANLRFAPIQMTALGHSASTFCPAIDYYLTE
HHHHHHHHHCCCCCEEECCCCCCHHHHHHHHCCEECCEEEEECCCCCHHHHHHHHHHCCC
EGYVSDPALFGERLLLLPDESLVFERSPHYTPVPPDIRETARPLRVALPSNLLKLNPGFI
CCCCCCHHHHCCEEEEECCCCCEEECCCCCCCCCCCHHHHCCCEEECCCCCCEECCCHHH
ALLARIRAAAGRELEFHVFPNVGGSELQAIRQTLERALPGAQVHGLMAYNRYLELLSACD
HHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
LNLSPFPFGGLHSVIDSLRQGLPVVAMECPEPHGRTDAMLLRRLGMPEWLIARDEDAYVA
CCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHCCCCCEEEECCCCHHHH
AALKVIDDDAVRVALGRQALDLDIDRLMFGDATTPLRSEVVDAVWWAYRHHDEVAAADRR
HHHHHHCCCHHHHHHCCHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
VIRPKDWAAG
CCCCCCCCCC
>Mature Secondary Structure
MIDLAGLERAAFNREPDRWAKAVDALRALLQSGAPSTPAEAARLATALATIIADPAAPPT
CCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
VDQFQQALLFRQELETLVRASPLGSLDHVLRAMGLQPRGGTPAAGAVDPQRLAKACLLLT
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHEEEE
LDSDVEFGPDDLLTLPPELAQTAYISLVGSKPVVSALGAERREAFLDRAEALRPAPLPPT
ECCCCCCCCCCCEECCHHHHHHHHHHEECCCHHHHHHCHHHHHHHHHHHHHCCCCCCCHH
LNHLVALSTAWMLCSYASHPRKHALKAVLNRTLVDLAGRIRIQAPALPAVRTLKDRPRML
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHCCCCHH
VAAEIMHSNHVQFRYFGQYLRQLRERFELVLVTEDTEADPAVRPLFDEVHTFRRAGGGAH
HHHHHHHCCCCHHHHHHHHHHHHHHHCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCH
LGEIARRMTEAEPDIVFWPSVGMRHWGPLLANLRFAPIQMTALGHSASTFCPAIDYYLTE
HHHHHHHHHCCCCCEEECCCCCCHHHHHHHHCCEECCEEEEECCCCCHHHHHHHHHHCCC
EGYVSDPALFGERLLLLPDESLVFERSPHYTPVPPDIRETARPLRVALPSNLLKLNPGFI
CCCCCCHHHHCCEEEEECCCCCEEECCCCCCCCCCCHHHHCCCEEECCCCCCEECCCHHH
ALLARIRAAAGRELEFHVFPNVGGSELQAIRQTLERALPGAQVHGLMAYNRYLELLSACD
HHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
LNLSPFPFGGLHSVIDSLRQGLPVVAMECPEPHGRTDAMLLRRLGMPEWLIARDEDAYVA
CCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHCCCCCEEEECCCCHHHH
AALKVIDDDAVRVALGRQALDLDIDRLMFGDATTPLRSEVVDAVWWAYRHHDEVAAADRR
HHHHHHCCCHHHHHHCCHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
VIRPKDWAAG
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA