| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197103937
Identifier: 197103937
GI number: 197103937
Start: 488530
End: 490362
Strand: Reverse
Name: 197103937
Synonym: PHZ_c0471
Alternate gene names: NA
Gene position: 490362-488530 (Counterclockwise)
Preceding gene: 197103941
Following gene: 197103935
Centisome position: 12.27
GC content: 72.78
Gene sequence:
>1833_bases GTGATCGATCTGGCGGGTCTCGAGCGGGCGGCCTTCAATCGGGAGCCGGACCGCTGGGCCAAGGCGGTGGACGCGCTCCG GGCGCTGCTCCAATCCGGCGCGCCATCCACGCCCGCGGAGGCGGCGCGCCTGGCGACGGCGCTGGCCACGATCATCGCCG ATCCGGCGGCCCCGCCCACCGTCGACCAGTTCCAGCAGGCCCTGCTCTTCCGCCAGGAGCTGGAGACCCTCGTCCGCGCC AGCCCGCTGGGCTCGCTCGACCATGTGCTCCGCGCCATGGGCCTGCAGCCGCGGGGCGGGACGCCGGCCGCGGGGGCGGT GGATCCGCAGCGGCTGGCGAAGGCCTGCCTGCTGCTCACCCTCGATTCCGACGTGGAGTTCGGTCCCGACGACCTCCTGA CCCTCCCGCCCGAGCTGGCCCAGACCGCCTACATCAGCCTGGTGGGGTCCAAGCCGGTGGTCTCGGCCCTGGGCGCCGAG CGGCGGGAGGCCTTCCTCGACCGCGCCGAGGCGCTGCGGCCCGCGCCGTTGCCGCCGACGCTGAACCACCTGGTCGCCCT CAGCACCGCCTGGATGCTGTGCAGCTACGCCAGCCACCCGCGCAAGCACGCCCTCAAGGCCGTGCTCAACCGCACGCTGG TCGACCTGGCCGGCCGCATCCGGATCCAGGCGCCGGCGCTCCCGGCCGTCCGCACGCTGAAGGACCGGCCGCGGATGCTG GTGGCGGCCGAGATCATGCACTCCAACCACGTGCAGTTCCGCTACTTCGGCCAGTACCTGCGCCAGCTGCGCGAGCGGTT CGAGCTCGTCCTGGTGACCGAGGACACCGAGGCCGACCCCGCGGTCCGGCCGCTGTTCGACGAGGTCCACACCTTCCGCC GGGCCGGCGGCGGCGCGCACCTGGGCGAGATCGCCCGGCGGATGACCGAGGCCGAACCGGACATCGTCTTCTGGCCCAGC GTGGGAATGCGGCACTGGGGACCGCTGCTGGCCAACCTGCGCTTCGCCCCGATCCAGATGACGGCGCTGGGCCACTCGGC GTCCACGTTCTGCCCGGCGATCGACTACTACCTGACCGAGGAAGGCTACGTCTCGGACCCCGCCCTGTTCGGCGAGCGGC TGCTGCTGCTGCCGGACGAGTCGCTCGTGTTCGAACGCTCGCCGCACTACACGCCCGTGCCGCCCGACATCCGCGAGACC GCGCGGCCGCTGCGGGTGGCCCTGCCCAGCAACCTCCTCAAGCTCAACCCCGGCTTCATCGCGCTGCTGGCGCGGATCCG CGCCGCGGCCGGCCGCGAGCTCGAGTTCCACGTCTTCCCCAATGTGGGCGGCTCCGAGCTGCAGGCCATCCGCCAGACCC TGGAGCGTGCGCTGCCGGGGGCGCAGGTCCACGGCCTCATGGCCTACAACCGCTACCTTGAGCTCCTGTCCGCCTGCGAC CTGAACCTCAGTCCCTTCCCGTTCGGCGGCCTGCACAGCGTCATCGATTCGCTGCGCCAGGGACTGCCGGTCGTGGCCAT GGAGTGTCCCGAGCCGCATGGGCGGACCGACGCCATGCTGCTGCGCCGCCTCGGCATGCCGGAGTGGCTGATCGCCCGGG ACGAGGACGCCTACGTGGCCGCGGCGCTGAAGGTGATCGACGACGACGCCGTCCGCGTGGCGCTCGGCCGCCAGGCGCTG GACCTCGACATCGACCGGCTGATGTTCGGCGACGCCACCACGCCGCTGCGCTCCGAGGTCGTGGACGCCGTCTGGTGGGC CTATCGCCACCACGACGAGGTGGCAGCCGCGGACCGCAGGGTGATCCGGCCGAAGGATTGGGCGGCGGGGTAG
Upstream 100 bases:
>100_bases GTTCCGGAAAAGCCCCAAGGCGTGCGGCTTGGCCTGGCCGCCGCACCCCTTTAAACCCGCCGCCGAGGCTCCTTCCGGGG CCACCGGAGGGGGCGTGGGC
Downstream 100 bases:
>100_bases CCTACCGCGACAGGCGCTGGGCGGCTTCGGCCATCGCCGCGCCCAGGCGCGCCTGCCCCTCGGCGGCGATGTGCAGTCCG TCGGCCTGGCGCGGAAGCGG
Product: putative accessory processing protein
Products: NA
Alternate protein names: Adhesin Processing HmwC-Like Protein; O-Linked N-Acetylglucosamine Transferase; Adhesin Processing Protein; Glycosyltransferase
Number of amino acids: Translated: 610; Mature: 610
Protein sequence:
>610_residues MIDLAGLERAAFNREPDRWAKAVDALRALLQSGAPSTPAEAARLATALATIIADPAAPPTVDQFQQALLFRQELETLVRA SPLGSLDHVLRAMGLQPRGGTPAAGAVDPQRLAKACLLLTLDSDVEFGPDDLLTLPPELAQTAYISLVGSKPVVSALGAE RREAFLDRAEALRPAPLPPTLNHLVALSTAWMLCSYASHPRKHALKAVLNRTLVDLAGRIRIQAPALPAVRTLKDRPRML VAAEIMHSNHVQFRYFGQYLRQLRERFELVLVTEDTEADPAVRPLFDEVHTFRRAGGGAHLGEIARRMTEAEPDIVFWPS VGMRHWGPLLANLRFAPIQMTALGHSASTFCPAIDYYLTEEGYVSDPALFGERLLLLPDESLVFERSPHYTPVPPDIRET ARPLRVALPSNLLKLNPGFIALLARIRAAAGRELEFHVFPNVGGSELQAIRQTLERALPGAQVHGLMAYNRYLELLSACD LNLSPFPFGGLHSVIDSLRQGLPVVAMECPEPHGRTDAMLLRRLGMPEWLIARDEDAYVAAALKVIDDDAVRVALGRQAL DLDIDRLMFGDATTPLRSEVVDAVWWAYRHHDEVAAADRRVIRPKDWAAG
Sequences:
>Translated_610_residues MIDLAGLERAAFNREPDRWAKAVDALRALLQSGAPSTPAEAARLATALATIIADPAAPPTVDQFQQALLFRQELETLVRA SPLGSLDHVLRAMGLQPRGGTPAAGAVDPQRLAKACLLLTLDSDVEFGPDDLLTLPPELAQTAYISLVGSKPVVSALGAE RREAFLDRAEALRPAPLPPTLNHLVALSTAWMLCSYASHPRKHALKAVLNRTLVDLAGRIRIQAPALPAVRTLKDRPRML VAAEIMHSNHVQFRYFGQYLRQLRERFELVLVTEDTEADPAVRPLFDEVHTFRRAGGGAHLGEIARRMTEAEPDIVFWPS VGMRHWGPLLANLRFAPIQMTALGHSASTFCPAIDYYLTEEGYVSDPALFGERLLLLPDESLVFERSPHYTPVPPDIRET ARPLRVALPSNLLKLNPGFIALLARIRAAAGRELEFHVFPNVGGSELQAIRQTLERALPGAQVHGLMAYNRYLELLSACD LNLSPFPFGGLHSVIDSLRQGLPVVAMECPEPHGRTDAMLLRRLGMPEWLIARDEDAYVAAALKVIDDDAVRVALGRQAL DLDIDRLMFGDATTPLRSEVVDAVWWAYRHHDEVAAADRRVIRPKDWAAG >Mature_610_residues MIDLAGLERAAFNREPDRWAKAVDALRALLQSGAPSTPAEAARLATALATIIADPAAPPTVDQFQQALLFRQELETLVRA SPLGSLDHVLRAMGLQPRGGTPAAGAVDPQRLAKACLLLTLDSDVEFGPDDLLTLPPELAQTAYISLVGSKPVVSALGAE RREAFLDRAEALRPAPLPPTLNHLVALSTAWMLCSYASHPRKHALKAVLNRTLVDLAGRIRIQAPALPAVRTLKDRPRML VAAEIMHSNHVQFRYFGQYLRQLRERFELVLVTEDTEADPAVRPLFDEVHTFRRAGGGAHLGEIARRMTEAEPDIVFWPS VGMRHWGPLLANLRFAPIQMTALGHSASTFCPAIDYYLTEEGYVSDPALFGERLLLLPDESLVFERSPHYTPVPPDIRET ARPLRVALPSNLLKLNPGFIALLARIRAAAGRELEFHVFPNVGGSELQAIRQTLERALPGAQVHGLMAYNRYLELLSACD LNLSPFPFGGLHSVIDSLRQGLPVVAMECPEPHGRTDAMLLRRLGMPEWLIARDEDAYVAAALKVIDDDAVRVALGRQAL DLDIDRLMFGDATTPLRSEVVDAVWWAYRHHDEVAAADRRVIRPKDWAAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67129; Mature: 67129
Theoretical pI: Translated: 6.47; Mature: 6.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDLAGLERAAFNREPDRWAKAVDALRALLQSGAPSTPAEAARLATALATIIADPAAPPT CCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCC VDQFQQALLFRQELETLVRASPLGSLDHVLRAMGLQPRGGTPAAGAVDPQRLAKACLLLT HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHEEEE LDSDVEFGPDDLLTLPPELAQTAYISLVGSKPVVSALGAERREAFLDRAEALRPAPLPPT ECCCCCCCCCCCEECCHHHHHHHHHHEECCCHHHHHHCHHHHHHHHHHHHHCCCCCCCHH LNHLVALSTAWMLCSYASHPRKHALKAVLNRTLVDLAGRIRIQAPALPAVRTLKDRPRML HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHCCCCHH VAAEIMHSNHVQFRYFGQYLRQLRERFELVLVTEDTEADPAVRPLFDEVHTFRRAGGGAH HHHHHHHCCCCHHHHHHHHHHHHHHHCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCH LGEIARRMTEAEPDIVFWPSVGMRHWGPLLANLRFAPIQMTALGHSASTFCPAIDYYLTE HHHHHHHHHCCCCCEEECCCCCCHHHHHHHHCCEECCEEEEECCCCCHHHHHHHHHHCCC EGYVSDPALFGERLLLLPDESLVFERSPHYTPVPPDIRETARPLRVALPSNLLKLNPGFI CCCCCCHHHHCCEEEEECCCCCEEECCCCCCCCCCCHHHHCCCEEECCCCCCEECCCHHH ALLARIRAAAGRELEFHVFPNVGGSELQAIRQTLERALPGAQVHGLMAYNRYLELLSACD HHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC LNLSPFPFGGLHSVIDSLRQGLPVVAMECPEPHGRTDAMLLRRLGMPEWLIARDEDAYVA CCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHCCCCCEEEECCCCHHHH AALKVIDDDAVRVALGRQALDLDIDRLMFGDATTPLRSEVVDAVWWAYRHHDEVAAADRR HHHHHHCCCHHHHHHCCHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC VIRPKDWAAG CCCCCCCCCC >Mature Secondary Structure MIDLAGLERAAFNREPDRWAKAVDALRALLQSGAPSTPAEAARLATALATIIADPAAPPT CCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCC VDQFQQALLFRQELETLVRASPLGSLDHVLRAMGLQPRGGTPAAGAVDPQRLAKACLLLT HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHEEEE LDSDVEFGPDDLLTLPPELAQTAYISLVGSKPVVSALGAERREAFLDRAEALRPAPLPPT ECCCCCCCCCCCEECCHHHHHHHHHHEECCCHHHHHHCHHHHHHHHHHHHHCCCCCCCHH LNHLVALSTAWMLCSYASHPRKHALKAVLNRTLVDLAGRIRIQAPALPAVRTLKDRPRML HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHCCCCHH VAAEIMHSNHVQFRYFGQYLRQLRERFELVLVTEDTEADPAVRPLFDEVHTFRRAGGGAH HHHHHHHCCCCHHHHHHHHHHHHHHHCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCH LGEIARRMTEAEPDIVFWPSVGMRHWGPLLANLRFAPIQMTALGHSASTFCPAIDYYLTE HHHHHHHHHCCCCCEEECCCCCCHHHHHHHHCCEECCEEEEECCCCCHHHHHHHHHHCCC EGYVSDPALFGERLLLLPDESLVFERSPHYTPVPPDIRETARPLRVALPSNLLKLNPGFI CCCCCCHHHHCCEEEEECCCCCEEECCCCCCCCCCCHHHHCCCEEECCCCCCEECCCHHH ALLARIRAAAGRELEFHVFPNVGGSELQAIRQTLERALPGAQVHGLMAYNRYLELLSACD HHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC LNLSPFPFGGLHSVIDSLRQGLPVVAMECPEPHGRTDAMLLRRLGMPEWLIARDEDAYVA CCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHCCCCCEEEECCCCHHHH AALKVIDDDAVRVALGRQALDLDIDRLMFGDATTPLRSEVVDAVWWAYRHHDEVAAADRR HHHHHHCCCHHHHHHCCHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC VIRPKDWAAG CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA