| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is gloB [H]
Identifier: 197103900
GI number: 197103900
Start: 441666
End: 442391
Strand: Reverse
Name: gloB [H]
Synonym: PHZ_c0434
Alternate gene names: 197103900
Gene position: 442391-441666 (Counterclockwise)
Preceding gene: 197103904
Following gene: 197103896
Centisome position: 11.07
GC content: 72.31
Gene sequence:
>726_bases ATGTCCCTCGCCGTCCACCAGTTTCCCTGCCTGTCCGACAACTACGGCTTCCTCGTGCGCGACGAGGCCAGCGGCCTGGC CGCCTGCGTCGACACGCCCGAGGCCGGCGCGATCCTGCGCGAGCTGGACCGCCTGGGCTGGACCCTGGCGCTGATCCTCA ACACCCACTGGCATCCCGACCACGCCGGCGGCAACGAGGAGATCAAGGCCCGCACCGGGGCCAAGGTCGTGGGGCCCAAG GAGGTCACCCGCATCGCCCCGCTCGACCGCGAGGTCCAGGGGGGCGACGAAGTGCTGCTGGGCGAGACCCGCTTCCGGGT GATCGAGAGCGGCGGCCACACCCTGGGCCACGTCGCCTACTACGACGCCGAGGACGGGATCGCCTTCGTCGGCGACACCC TCTTCGCCCTGGGCTGCGGGCGGCTGTTCGAGGGCACGCCGGAACAGATGTGGGCCAGCCTCTCGCGCCTCGCCGCCCTG CCCGACGACACCCGCGTCTACTGCGCCCACGAATACACCGAGGCGAACGCGCGCTTCGCCCTGTCGCTGGGGGACGATCC CGTGCTGAAGGCCCGCGCCACCGAGGTCTTCGCCGCCCGCGCCCGAGGCGAGCCCACCGTGCCCACCACCATCGGCCTCG AGAAGGCCACCAACCCCTTCCTGCGCGCCGCGAACGCGGCCGCCTTCGCCGACGTCCGCGCCGCCAAGGACAGCTTCAAG GGCTGA
Upstream 100 bases:
>100_bases GAAGCTCGAGGACGTCCCTGCGCATCTGACTCCCGGCTATCCTCGACGAAGGATCACGACCAGCCTAAACCGGTTCGCAG CCTCTCAGGAGAGCCTCGCG
Downstream 100 bases:
>100_bases GCCTCATTAGTCCTCCCCCTCAGGGGGAGGTGGCCCGAAGGGCCAGAGGGGGCTTCCCGCCGCAAGATCGGCCACGAACA AACACGAACCCACACGAACG
Product: hydroxyacylglutathione hydrolase
Products: NA
Alternate protein names: Glyoxalase II; Glx II [H]
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MSLAVHQFPCLSDNYGFLVRDEASGLAACVDTPEAGAILRELDRLGWTLALILNTHWHPDHAGGNEEIKARTGAKVVGPK EVTRIAPLDREVQGGDEVLLGETRFRVIESGGHTLGHVAYYDAEDGIAFVGDTLFALGCGRLFEGTPEQMWASLSRLAAL PDDTRVYCAHEYTEANARFALSLGDDPVLKARATEVFAARARGEPTVPTTIGLEKATNPFLRAANAAAFADVRAAKDSFK G
Sequences:
>Translated_241_residues MSLAVHQFPCLSDNYGFLVRDEASGLAACVDTPEAGAILRELDRLGWTLALILNTHWHPDHAGGNEEIKARTGAKVVGPK EVTRIAPLDREVQGGDEVLLGETRFRVIESGGHTLGHVAYYDAEDGIAFVGDTLFALGCGRLFEGTPEQMWASLSRLAAL PDDTRVYCAHEYTEANARFALSLGDDPVLKARATEVFAARARGEPTVPTTIGLEKATNPFLRAANAAAFADVRAAKDSFK G >Mature_240_residues SLAVHQFPCLSDNYGFLVRDEASGLAACVDTPEAGAILRELDRLGWTLALILNTHWHPDHAGGNEEIKARTGAKVVGPKE VTRIAPLDREVQGGDEVLLGETRFRVIESGGHTLGHVAYYDAEDGIAFVGDTLFALGCGRLFEGTPEQMWASLSRLAALP DDTRVYCAHEYTEANARFALSLGDDPVLKARATEVFAARARGEPTVPTTIGLEKATNPFLRAANAAAFADVRAAKDSFKG
Specific function: Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid [H]
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]
Homologues:
Organism=Homo sapiens, GI14150041, Length=232, Percent_Identity=38.3620689655172, Blast_Score=144, Evalue=6e-35, Organism=Homo sapiens, GI94538322, Length=261, Percent_Identity=35.632183908046, Blast_Score=143, Evalue=2e-34, Organism=Homo sapiens, GI94538320, Length=258, Percent_Identity=34.8837209302326, Blast_Score=143, Evalue=2e-34, Organism=Homo sapiens, GI116642887, Length=227, Percent_Identity=37.0044052863436, Blast_Score=127, Evalue=9e-30, Organism=Homo sapiens, GI21703352, Length=226, Percent_Identity=36.7256637168142, Blast_Score=126, Evalue=2e-29, Organism=Homo sapiens, GI46361987, Length=184, Percent_Identity=39.1304347826087, Blast_Score=123, Evalue=2e-28, Organism=Homo sapiens, GI41327741, Length=181, Percent_Identity=28.7292817679558, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI1786406, Length=255, Percent_Identity=37.6470588235294, Blast_Score=137, Evalue=9e-34, Organism=Escherichia coli, GI1787158, Length=176, Percent_Identity=31.8181818181818, Blast_Score=69, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17536925, Length=223, Percent_Identity=35.4260089686099, Blast_Score=121, Evalue=3e-28, Organism=Caenorhabditis elegans, GI17538952, Length=192, Percent_Identity=28.125, Blast_Score=67, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6320478, Length=237, Percent_Identity=29.1139240506329, Blast_Score=83, Evalue=4e-17, Organism=Saccharomyces cerevisiae, GI6324614, Length=236, Percent_Identity=26.271186440678, Blast_Score=72, Evalue=1e-13, Organism=Drosophila melanogaster, GI21356335, Length=260, Percent_Identity=37.3076923076923, Blast_Score=167, Evalue=7e-42, Organism=Drosophila melanogaster, GI24667711, Length=260, Percent_Identity=37.3076923076923, Blast_Score=167, Evalue=7e-42, Organism=Drosophila melanogaster, GI24667703, Length=258, Percent_Identity=36.8217054263566, Blast_Score=166, Evalue=1e-41, Organism=Drosophila melanogaster, GI221330176, Length=166, Percent_Identity=31.9277108433735, Blast_Score=84, Evalue=8e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR017782 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: =3.1.2.6 [H]
Molecular weight: Translated: 25894; Mature: 25763
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLAVHQFPCLSDNYGFLVRDEASGLAACVDTPEAGAILRELDRLGWTLALILNTHWHPD CCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHCEEEEEEEECCCCCC HAGGNEEIKARTGAKVVGPKEVTRIAPLDREVQGGDEVLLGETRFRVIESGGHTLGHVAY CCCCCCEEECCCCCEEECHHHHHHHCCCCCCCCCCCEEEECCCEEEEEECCCCEEEEEEE YDAEDGIAFVGDTLFALGCGRLFEGTPEQMWASLSRLAALPDDTRVYCAHEYTEANARFA EECCCCEEHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHCCCCCCEEEEEECEECCCCEEE LSLGDDPVLKARATEVFAARARGEPTVPTTIGLEKATNPFLRAANAAAFADVRAAKDSFK EECCCCCCCHHHHHHHHHHHCCCCCCCCEEECCHHCCCHHHHHCCHHHHHHHHHHHHHCC G C >Mature Secondary Structure SLAVHQFPCLSDNYGFLVRDEASGLAACVDTPEAGAILRELDRLGWTLALILNTHWHPD CCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHCEEEEEEEECCCCCC HAGGNEEIKARTGAKVVGPKEVTRIAPLDREVQGGDEVLLGETRFRVIESGGHTLGHVAY CCCCCCEEECCCCCEEECHHHHHHHCCCCCCCCCCCEEEECCCEEEEEECCCCEEEEEEE YDAEDGIAFVGDTLFALGCGRLFEGTPEQMWASLSRLAALPDDTRVYCAHEYTEANARFA EECCCCEEHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHCCCCCCEEEEEECEECCCCEEE LSLGDDPVLKARATEVFAARARGEPTVPTTIGLEKATNPFLRAANAAAFADVRAAKDSFK EECCCCCCCHHHHHHHHHHHCCCCCCCCEEECCHHCCCHHHHHCCHHHHHHHHHHHHHCC G C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA