| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197103821
Identifier: 197103821
GI number: 197103821
Start: 360434
End: 361891
Strand: Direct
Name: 197103821
Synonym: PHZ_c0355
Alternate gene names: NA
Gene position: 360434-361891 (Clockwise)
Preceding gene: 197103820
Following gene: 197103822
Centisome position: 9.02
GC content: 72.36
Gene sequence:
>1458_bases GTGAACCAGGAGGGGACGACGGTGCAGACATCCGAGGCCGCCGACGCGCGCGGGCCCGCCGGCATGGCCGGGCTGCCGAG CGGGGAACGCCTGAACCGCGGCGGCCTTTCCTGGGCGCTGTTCCAGGGCGGGCGCGACCCGTTCATCATCCTGGTCACCA TCTACATCTTCATGCCCTACGTCGCCTCGACGTTGGTGGGCGACCCGGTGCGCGGCCAGGAGGTGATCTCCCGCTGGGAC CAGTACATCGGCTGGACGGTGATGCTGACCGCGCCGTTCCTGGGCGCCTCGATCGACAAACTGGGGCCGCGCAAGGGCTG GCTGGCGCTGACGGTGGGGCTGATGGTCCCGGCGATCGCGGCGCTGTGGTTCGCCAGGCCCGGCGGGCCGCTGCCGCTGA CGGCGGTGCTGCTGCTCGGCTTCTTCGCGCGGGTGCTCTACGTCTACTCGGAGGTGCTGCACAACTCGCTGCTGGTCCGC GCCGCGGGCCTGGCCGGGGCGCACCGGGCCTCGGGCCTGGCCCTGTCGCTGGCCAACCTGTTCTCGGTGGTCGCCCTGGC CTTCACCGCCTGGGCCTTCGCCCTGCCGGGCAAGGTGGACTGGGCGTTCGTGCCCGACGCGCCGCTGTTCGGCCTCGACC CCGACGCCCACGAGCCCGAGCGGGTGGTGACCCTGATGGCGGCCGCCCTGATGCTGCTGGGCGCGATCCCGCTGTTCCTG TTCACGCCCGACGCCCCGCCCACCGGCGTGCCGGTGCTGCGCGCGTTCAGGGAGGGGGCGGGCGAGCTGTGGCGGATGGT GCGGACGGTCGGGCGGTTCAAGGACGCGGCCGTCTACCTCGTCTCGCGGATGTTCTTCGTGGATGGGATGAACGGAGTGC TGATCTACGCCGGCGTCTTCGCCGTGGGGGTGATGAAGTGGGGCCCGCTGGAGATGCTGGCCTACGGCATCCTGCTGTCG GTGTTCGCCGTGCTGGGCGGCTATGTGGCCCGCTGGCTGGACGGCGCCCTGGGGCCCAAGACGGCGCTGAAGATCGAGAT CGCCGCGGCGATGCTGGGCCTGCTGGCCGTGCTGGGCATGGCGCCCGACCGGATCCTGTTCTTCTGGCCGCACGATGCGG CGGCGCACGGGCCGATGTGGGACGGGCCGGTGTTCCGCACCCTGCCGGACTGGTTCTATGTCGGCGCGGGCTTCGTCTGC GCCGTCTTCATCACCGCCCAGTACGCCTCCAGCCGCACGCTGCTGACGCGGCTGGCTCCGCCCGAGCAGACCGGGGCCTT CTTCGGCGTCTACGCCCTGTCGGGGGTGGCCACGGCCTGGCTGGCGCCCACGCTGGTGAGCCTCGGCACCGCGCTCACGC GGACCCAGCAGGGCGGCCTTGCGACCCTGCTGGTGCTGCTGGCGGCGGGGCTGGCGGGACTTTTCTTCGTCCGCGGCGGC GGGCGCATCGTGCGCTGA
Upstream 100 bases:
>100_bases CGCCCAACCCCCGCGCGGGCCGAATCACCTGCGCGTGAATCACGGAGTGCTGATCGGGCCGGGCGCCGCTAACCTGGGGC GAGCCGCCGGCAGAGCGGCC
Downstream 100 bases:
>100_bases ACCGCGCGTGCGGGCCGGATTCCCTCAATGTTTTCAGTGCAACCGCCTGGTGTAGTTAACGGGCGTCAATGCTGAATTCC AGTAAACCATAGAATATTCG
Product: hypothetical protein
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Transporter; Facilitator Superfamily Permease; MFS Transporter; MFS Superfamily Transporter; Transporter Facilitator Family; Mfs Transporter; Transmembrane Protein; Permease Facilitator Superfamily; Permease Of Facilitator Superfamily; Facilitator Family Transporter; MFS Transporter UMF1 Family
Number of amino acids: Translated: 485; Mature: 485
Protein sequence:
>485_residues MNQEGTTVQTSEAADARGPAGMAGLPSGERLNRGGLSWALFQGGRDPFIILVTIYIFMPYVASTLVGDPVRGQEVISRWD QYIGWTVMLTAPFLGASIDKLGPRKGWLALTVGLMVPAIAALWFARPGGPLPLTAVLLLGFFARVLYVYSEVLHNSLLVR AAGLAGAHRASGLALSLANLFSVVALAFTAWAFALPGKVDWAFVPDAPLFGLDPDAHEPERVVTLMAAALMLLGAIPLFL FTPDAPPTGVPVLRAFREGAGELWRMVRTVGRFKDAAVYLVSRMFFVDGMNGVLIYAGVFAVGVMKWGPLEMLAYGILLS VFAVLGGYVARWLDGALGPKTALKIEIAAAMLGLLAVLGMAPDRILFFWPHDAAAHGPMWDGPVFRTLPDWFYVGAGFVC AVFITAQYASSRTLLTRLAPPEQTGAFFGVYALSGVATAWLAPTLVSLGTALTRTQQGGLATLLVLLAAGLAGLFFVRGG GRIVR
Sequences:
>Translated_485_residues MNQEGTTVQTSEAADARGPAGMAGLPSGERLNRGGLSWALFQGGRDPFIILVTIYIFMPYVASTLVGDPVRGQEVISRWD QYIGWTVMLTAPFLGASIDKLGPRKGWLALTVGLMVPAIAALWFARPGGPLPLTAVLLLGFFARVLYVYSEVLHNSLLVR AAGLAGAHRASGLALSLANLFSVVALAFTAWAFALPGKVDWAFVPDAPLFGLDPDAHEPERVVTLMAAALMLLGAIPLFL FTPDAPPTGVPVLRAFREGAGELWRMVRTVGRFKDAAVYLVSRMFFVDGMNGVLIYAGVFAVGVMKWGPLEMLAYGILLS VFAVLGGYVARWLDGALGPKTALKIEIAAAMLGLLAVLGMAPDRILFFWPHDAAAHGPMWDGPVFRTLPDWFYVGAGFVC AVFITAQYASSRTLLTRLAPPEQTGAFFGVYALSGVATAWLAPTLVSLGTALTRTQQGGLATLLVLLAAGLAGLFFVRGG GRIVR >Mature_485_residues MNQEGTTVQTSEAADARGPAGMAGLPSGERLNRGGLSWALFQGGRDPFIILVTIYIFMPYVASTLVGDPVRGQEVISRWD QYIGWTVMLTAPFLGASIDKLGPRKGWLALTVGLMVPAIAALWFARPGGPLPLTAVLLLGFFARVLYVYSEVLHNSLLVR AAGLAGAHRASGLALSLANLFSVVALAFTAWAFALPGKVDWAFVPDAPLFGLDPDAHEPERVVTLMAAALMLLGAIPLFL FTPDAPPTGVPVLRAFREGAGELWRMVRTVGRFKDAAVYLVSRMFFVDGMNGVLIYAGVFAVGVMKWGPLEMLAYGILLS VFAVLGGYVARWLDGALGPKTALKIEIAAAMLGLLAVLGMAPDRILFFWPHDAAAHGPMWDGPVFRTLPDWFYVGAGFVC AVFITAQYASSRTLLTRLAPPEQTGAFFGVYALSGVATAWLAPTLVSLGTALTRTQQGGLATLLVLLAAGLAGLFFVRGG GRIVR
Specific function: Unknown
COG id: COG2270
COG function: function code R; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51582; Mature: 51582
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQEGTTVQTSEAADARGPAGMAGLPSGERLNRGGLSWALFQGGRDPFIILVTIYIFMPY CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHH VASTLVGDPVRGQEVISRWDQYIGWTVMLTAPFLGASIDKLGPRKGWLALTVGLMVPAIA HHHHHCCCCCCHHHHHHHHHHHHCEEEEEECCHHCCCHHHCCCCCCHHHHHHHHHHHHHH ALWFARPGGPLPLTAVLLLGFFARVLYVYSEVLHNSLLVRAAGLAGAHRASGLALSLANL HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHH FSVVALAFTAWAFALPGKVDWAFVPDAPLFGLDPDAHEPERVVTLMAAALMLLGAIPLFL HHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEE FTPDAPPTGVPVLRAFREGAGELWRMVRTVGRFKDAAVYLVSRMFFVDGMNGVLIYAGVF ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH AVGVMKWGPLEMLAYGILLSVFAVLGGYVARWLDGALGPKTALKIEIAAAMLGLLAVLGM HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC APDRILFFWPHDAAAHGPMWDGPVFRTLPDWFYVGAGFVCAVFITAQYASSRTLLTRLAP CCCCEEEEECCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC PEQTGAFFGVYALSGVATAWLAPTLVSLGTALTRTQQGGLATLLVLLAAGLAGLFFVRGG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEECC GRIVR CEECC >Mature Secondary Structure MNQEGTTVQTSEAADARGPAGMAGLPSGERLNRGGLSWALFQGGRDPFIILVTIYIFMPY CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHH VASTLVGDPVRGQEVISRWDQYIGWTVMLTAPFLGASIDKLGPRKGWLALTVGLMVPAIA HHHHHCCCCCCHHHHHHHHHHHHCEEEEEECCHHCCCHHHCCCCCCHHHHHHHHHHHHHH ALWFARPGGPLPLTAVLLLGFFARVLYVYSEVLHNSLLVRAAGLAGAHRASGLALSLANL HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHH FSVVALAFTAWAFALPGKVDWAFVPDAPLFGLDPDAHEPERVVTLMAAALMLLGAIPLFL HHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEE FTPDAPPTGVPVLRAFREGAGELWRMVRTVGRFKDAAVYLVSRMFFVDGMNGVLIYAGVF ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH AVGVMKWGPLEMLAYGILLSVFAVLGGYVARWLDGALGPKTALKIEIAAAMLGLLAVLGM HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC APDRILFFWPHDAAAHGPMWDGPVFRTLPDWFYVGAGFVCAVFITAQYASSRTLLTRLAP CCCCEEEEECCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC PEQTGAFFGVYALSGVATAWLAPTLVSLGTALTRTQQGGLATLLVLLAAGLAGLFFVRGG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEECC GRIVR CEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA