| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is kefB [H]
Identifier: 197103784
GI number: 197103784
Start: 310723
End: 312582
Strand: Direct
Name: kefB [H]
Synonym: PHZ_c0318
Alternate gene names: 197103784
Gene position: 310723-312582 (Clockwise)
Preceding gene: 197103782
Following gene: 197103785
Centisome position: 7.78
GC content: 72.69
Gene sequence:
>1860_bases ATGGCGGACGCGGCGGCGGGCATGGACCTGGGGCACGGGGTGGCCCTGCTGGCGGCCGCGGTGGTCGCCGTCCCGATCTT CCGCAAGCTCGGCCTGGGCTCGGTCCTGGGCTACCTCGCCGCGGGCCTGGCCATCGGGCCGTTCGGCCTGCGGCTCTTCG CCGATCCCGAGGCGATCCTGCACTTCGCCGAGCTCGGGGTGGTGCTGTTCCTGTTCCTGATCGGGCTGGAGATGCGGCCG GCGCGGCTCTGGAGCCTGCGCAAGGAGATCTTCGGCCTGGGCGCGACCCAGGTGCTGGCCTGCTGCGCCCTGCTGTCGGG GATCGCGCTGCTGGCGGGCCTGCCGTGGCAGGCGGCGGTGATCGGCGCCAGCGGCTTCGTGCTGTCGTCCACCGCGGTGA TCATGAAGATGCTGGACGAGCAGGGCGAGACCGCCACCGAGGCGGGTCAGCGGGCGATCTCGATCCTGCTGCTGGAGGAC ATCGCCGTCGTCCCGCTGCTGGCCCTGGTGGCCGTCCTGGCCGCCGCGTCCGGCTACGCCGACGCCGACGCCCGGCCCGC CTGGCAGGCCCTCGCCGTCGCCGCCGGCTGCATCGCCGTGGTGGTGGCCGCCGGCAAGTGGCTGCTCAACCCGTTCTTCC GGGTGCTGGCCCGCTCGGGCGCGCGGGAGATCATGACCGCCGCCGCCCTGCTGGTGGTGCTGGGGACGGCGCTGTTCATG CAGTGGGGCGGCCTCTCCATGGCGATGGGCGCCTTCCTGGCCGGCGTCCTGCTGTCGGAGAGCGTCTTCCGCCATCAGCT GGAGGCCGACATCGAGCCGTTCCGCGGCATCCTGCTGGGCCTGTTCTTCCTCAGCGTCGGCATGTCGCTGGACGTCGCGG TGGTGGTCGCCGAGTGGGGCCTGGTGGTCGCGGGCCTGGCCGCCTTCATGGTCGCCAAGGCCGCCGGCATCTATCTCGTG GCCCGCCTGTTCCGCGCCCCGCCGCGCGAGGCGGTCCAGCGCGCGGCCCTGTTCGCCCAAGGGGGCGAGTTCGCCTTCGT CCTCTACGGCGCGGCGACGGCCGCGGGGGTGATGGCGCCTCGGGTCGGCGCCCTGATGAGCGCCGTCGTCATCCTCTCGA TGGCGGTGACCCCGCTGGTGGTGATCCTGCTGAACCGGCTCATGCCCCCGCCGAAGGTCTCCATGGACGGGGTGGAGGCG CCCGACGGCCTGGAGGGCCGCGTCCTGCTGATCGGCTTCGGCCGCTTCGCCCAGGTGGTCAGCCAGCCGCTGCTGGCCAA GGGCTTCGAGATCTCGCTGATCGAATCCGACGTGGAGATGATCCGCGCGGCCGGATCGTTCGGCTTCAAGGTCTACTACG GCGACGGCACCCGCCTGGACGTGCTGCGCGCCTCGGGCGCGGAGCGGGCCGAGGCGATCCTGGTATGCGTCGACAAGCCC GACGCGGCCGATCGGATCGTCGAGCTGGTCAAGGCCGAGTTCCCGCTCGCCAAGGTGTACGCCCGCGCCTACGACCGCGG CCACTCCATGCGGCTGGTCCAGGCCGGCGTCGATTTCCAGATCCGCGAGACCTTCGAGTCCGCCATCAAGATGGGCCGCC ACGTCCTGCACGGCCTGGGCGTGGACGAGGCCGAGGCGGCCGAGATCATCCAGGACGTGCGCGAGCGCGACAACGAGCGC TTCCAGCTCCAGCTCACCGGCGGGCTCGCCGCCGGCCGCTACCTGATGCGCGGCAACATGCCGACCCCGACGCCCGAGCC GTTCTCGGTCCCCCGCCGCGGCGGCGAGGCGCTCAACCCCGAAGCGGCCGAGGCGCTGGCCCAGCGCAAGGCGGGCCGCG TTCCGCACAAGGCGAAGTAG
Upstream 100 bases:
>100_bases CGCGCCTCCAGCGGGCGCGGCGATCAGCCCTTCGCCCGCTCGCGTGTTGCCTCCCGGGGGCGTTAGCCGCCACATAGCGC GGCGGGGAGCAGGAGCGGCG
Downstream 100 bases:
>100_bases GATCCCTCGGCGAGGCGGCTGCGTCCCAGGCTCCGAGCGGGGCCTTTGTTCATCGATCGATGAATTTTTTGGTCGACCCC GGTTCTCAACCGGACGTTTG
Product: glutathione-regulated potassium efflux protein B
Products: Proton [Cytoplasm]; K (I) [Periplasm] [C]
Alternate protein names: K(+)/H(+) antiporter [H]
Number of amino acids: Translated: 619; Mature: 618
Protein sequence:
>619_residues MADAAAGMDLGHGVALLAAAVVAVPIFRKLGLGSVLGYLAAGLAIGPFGLRLFADPEAILHFAELGVVLFLFLIGLEMRP ARLWSLRKEIFGLGATQVLACCALLSGIALLAGLPWQAAVIGASGFVLSSTAVIMKMLDEQGETATEAGQRAISILLLED IAVVPLLALVAVLAAASGYADADARPAWQALAVAAGCIAVVVAAGKWLLNPFFRVLARSGAREIMTAAALLVVLGTALFM QWGGLSMAMGAFLAGVLLSESVFRHQLEADIEPFRGILLGLFFLSVGMSLDVAVVVAEWGLVVAGLAAFMVAKAAGIYLV ARLFRAPPREAVQRAALFAQGGEFAFVLYGAATAAGVMAPRVGALMSAVVILSMAVTPLVVILLNRLMPPPKVSMDGVEA PDGLEGRVLLIGFGRFAQVVSQPLLAKGFEISLIESDVEMIRAAGSFGFKVYYGDGTRLDVLRASGAERAEAILVCVDKP DAADRIVELVKAEFPLAKVYARAYDRGHSMRLVQAGVDFQIRETFESAIKMGRHVLHGLGVDEAEAAEIIQDVRERDNER FQLQLTGGLAAGRYLMRGNMPTPTPEPFSVPRRGGEALNPEAAEALAQRKAGRVPHKAK
Sequences:
>Translated_619_residues MADAAAGMDLGHGVALLAAAVVAVPIFRKLGLGSVLGYLAAGLAIGPFGLRLFADPEAILHFAELGVVLFLFLIGLEMRP ARLWSLRKEIFGLGATQVLACCALLSGIALLAGLPWQAAVIGASGFVLSSTAVIMKMLDEQGETATEAGQRAISILLLED IAVVPLLALVAVLAAASGYADADARPAWQALAVAAGCIAVVVAAGKWLLNPFFRVLARSGAREIMTAAALLVVLGTALFM QWGGLSMAMGAFLAGVLLSESVFRHQLEADIEPFRGILLGLFFLSVGMSLDVAVVVAEWGLVVAGLAAFMVAKAAGIYLV ARLFRAPPREAVQRAALFAQGGEFAFVLYGAATAAGVMAPRVGALMSAVVILSMAVTPLVVILLNRLMPPPKVSMDGVEA PDGLEGRVLLIGFGRFAQVVSQPLLAKGFEISLIESDVEMIRAAGSFGFKVYYGDGTRLDVLRASGAERAEAILVCVDKP DAADRIVELVKAEFPLAKVYARAYDRGHSMRLVQAGVDFQIRETFESAIKMGRHVLHGLGVDEAEAAEIIQDVRERDNER FQLQLTGGLAAGRYLMRGNMPTPTPEPFSVPRRGGEALNPEAAEALAQRKAGRVPHKAK >Mature_618_residues ADAAAGMDLGHGVALLAAAVVAVPIFRKLGLGSVLGYLAAGLAIGPFGLRLFADPEAILHFAELGVVLFLFLIGLEMRPA RLWSLRKEIFGLGATQVLACCALLSGIALLAGLPWQAAVIGASGFVLSSTAVIMKMLDEQGETATEAGQRAISILLLEDI AVVPLLALVAVLAAASGYADADARPAWQALAVAAGCIAVVVAAGKWLLNPFFRVLARSGAREIMTAAALLVVLGTALFMQ WGGLSMAMGAFLAGVLLSESVFRHQLEADIEPFRGILLGLFFLSVGMSLDVAVVVAEWGLVVAGLAAFMVAKAAGIYLVA RLFRAPPREAVQRAALFAQGGEFAFVLYGAATAAGVMAPRVGALMSAVVILSMAVTPLVVILLNRLMPPPKVSMDGVEAP DGLEGRVLLIGFGRFAQVVSQPLLAKGFEISLIESDVEMIRAAGSFGFKVYYGDGTRLDVLRASGAERAEAILVCVDKPD AADRIVELVKAEFPLAKVYARAYDRGHSMRLVQAGVDFQIRETFESAIKMGRHVLHGLGVDEAEAAEIIQDVRERDNERF QLQLTGGLAAGRYLMRGNMPTPTPEPFSVPRRGGEALNPEAAEALAQRKAGRVPHKAK
Specific function: Transport system that facilitate potassium-efflux, possibly by potassium-proton antiport [H]
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI157388921, Length=393, Percent_Identity=28.2442748091603, Blast_Score=83, Evalue=1e-15, Organism=Escherichia coli, GI1786232, Length=556, Percent_Identity=44.4244604316547, Blast_Score=439, Evalue=1e-124, Organism=Escherichia coli, GI1789749, Length=551, Percent_Identity=43.557168784029, Blast_Score=415, Evalue=1e-117, Organism=Escherichia coli, GI1786685, Length=500, Percent_Identity=30.2, Blast_Score=150, Evalue=2e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR004771 - InterPro: IPR016040 - InterPro: IPR003148 [H]
Pfam domain/function: PF00999 Na_H_Exchanger; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 65185; Mature: 65053
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: PS00664 VINCULIN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADAAAGMDLGHGVALLAAAVVAVPIFRKLGLGSVLGYLAAGLAIGPFGLRLFADPEAIL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCEEEECCHHHHH HFAELGVVLFLFLIGLEMRPARLWSLRKEIFGLGATQVLACCALLSGIALLAGLPWQAAV HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHE IGASGFVLSSTAVIMKMLDEQGETATEAGQRAISILLLEDIAVVPLLALVAVLAAASGYA ECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DADARPAWQALAVAAGCIAVVVAAGKWLLNPFFRVLARSGAREIMTAAALLVVLGTALFM CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH QWGGLSMAMGAFLAGVLLSESVFRHQLEADIEPFRGILLGLFFLSVGMSLDVAVVVAEWG HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LVVAGLAAFMVAKAAGIYLVARLFRAPPREAVQRAALFAQGGEFAFVLYGAATAAGVMAP HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHH RVGALMSAVVILSMAVTPLVVILLNRLMPPPKVSMDGVEAPDGLEGRVLLIGFGRFAQVV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHH SQPLLAKGFEISLIESDVEMIRAAGSFGFKVYYGDGTRLDVLRASGAERAEAILVCVDKP CCHHHHCCCEEEEEHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCEEEEEECCC DAADRIVELVKAEFPLAKVYARAYDRGHSMRLVQAGVDFQIRETFESAIKMGRHVLHGLG CHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCC VDEAEAAEIIQDVRERDNERFQLQLTGGLAAGRYLMRGNMPTPTPEPFSVPRRGGEALNP CCHHHHHHHHHHHHHCCCCEEEEEEECCHHHCHHHEECCCCCCCCCCCCCCCCCCCCCCH EAAEALAQRKAGRVPHKAK HHHHHHHHHHCCCCCCCCC >Mature Secondary Structure ADAAAGMDLGHGVALLAAAVVAVPIFRKLGLGSVLGYLAAGLAIGPFGLRLFADPEAIL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCEEEECCHHHHH HFAELGVVLFLFLIGLEMRPARLWSLRKEIFGLGATQVLACCALLSGIALLAGLPWQAAV HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHE IGASGFVLSSTAVIMKMLDEQGETATEAGQRAISILLLEDIAVVPLLALVAVLAAASGYA ECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DADARPAWQALAVAAGCIAVVVAAGKWLLNPFFRVLARSGAREIMTAAALLVVLGTALFM CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH QWGGLSMAMGAFLAGVLLSESVFRHQLEADIEPFRGILLGLFFLSVGMSLDVAVVVAEWG HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LVVAGLAAFMVAKAAGIYLVARLFRAPPREAVQRAALFAQGGEFAFVLYGAATAAGVMAP HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHH RVGALMSAVVILSMAVTPLVVILLNRLMPPPKVSMDGVEAPDGLEGRVLLIGFGRFAQVV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHH SQPLLAKGFEISLIESDVEMIRAAGSFGFKVYYGDGTRLDVLRASGAERAEAILVCVDKP CCHHHHCCCEEEEEHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCEEEEEECCC DAADRIVELVKAEFPLAKVYARAYDRGHSMRLVQAGVDFQIRETFESAIKMGRHVLHGLG CHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCC VDEAEAAEIIQDVRERDNERFQLQLTGGLAAGRYLMRGNMPTPTPEPFSVPRRGGEALNP CCHHHHHHHHHHHHHCCCCEEEEEEECCHHHCHHHEECCCCCCCCCCCCCCCCCCCCCCH EAAEALAQRKAGRVPHKAK HHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; K (I) [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + K (I) [Cytoplasm] = Proton [Cytoplasm] + K (I) [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]