| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is ygfJ [H]
Identifier: 197103747
GI number: 197103747
Start: 275213
End: 275785
Strand: Direct
Name: ygfJ [H]
Synonym: PHZ_c0281
Alternate gene names: 197103747
Gene position: 275213-275785 (Clockwise)
Preceding gene: 197103740
Following gene: 197103748
Centisome position: 6.89
GC content: 76.61
Gene sequence:
>573_bases GTGGCGACAGAGGCGGTTGTCCTGGCGGCGGGTGCGGGCTCCCGGTTCGGGGGCGGCAAGCTGCTGACCAGCTACGGCAG GGGCGTGCTGCTGGACGGCGCGCTGGCCGCGGCCTTCGCCGCGCCCGTGCGGCGCGTGAGCGTGGTGACCGGCGCCGACG GCTCCCAGATCGCCGAGGCGGCGCTGGCCCACGACCCCTCGGTCCAGATCGTCGACGCCCACGGCTGGGAGGAGGGCATG GCCGCCTCGCTGCGCGCCGGCATCGCCAGCCTGCCCGACGACACCGAGGCCTGCTTCATCTTCCTGGGCGACATGCCGCG CGTGCCGCACGCGATCCTGAAGCCGCTCTGCGAGGCGGTGCTGCAGGGCGCGCCCGCCGCCGCCCCGGTGTTCGCCGGCC GCCGCGGCCATCCGGCGGTGCTGTCGCGGACGCTGTTCCCGCAGGTGCTGGCGTTGCGAGGGGACGTCGGCGCGCGGGCG ATCCTGGACGCGCTCGGCGAGCGCCTGGCCCTCGTCGAGTCCCCCGACGACGGCGTGCTGTTCGACGTCGACGCCCGGCG CGACCTCGCCTGA
Upstream 100 bases:
>100_bases GGTCACCCCGCGGCCGAAGCCGTCCACGAGCGCGGGGCCTTGCGGCGAAAGGTCAGGCGTGTGCGTCATAGGCTCGGACC AAGATAGAGGCGAACCGGTC
Downstream 100 bases:
>100_bases TCCGGGCCTGATCCGGGCCTTACCGGAACTGCCACGCTCCGGCGCACGTTCGAAAATCGGCGTTCGTGCGGGCGCTCCGT CCGCCGCGCCGGGAGCGGAC
Product: conserved uncharacterized MobA-related protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MATEAVVLAAGAGSRFGGGKLLTSYGRGVLLDGALAAAFAAPVRRVSVVTGADGSQIAEAALAHDPSVQIVDAHGWEEGM AASLRAGIASLPDDTEACFIFLGDMPRVPHAILKPLCEAVLQGAPAAAPVFAGRRGHPAVLSRTLFPQVLALRGDVGARA ILDALGERLALVESPDDGVLFDVDARRDLA
Sequences:
>Translated_190_residues MATEAVVLAAGAGSRFGGGKLLTSYGRGVLLDGALAAAFAAPVRRVSVVTGADGSQIAEAALAHDPSVQIVDAHGWEEGM AASLRAGIASLPDDTEACFIFLGDMPRVPHAILKPLCEAVLQGAPAAAPVFAGRRGHPAVLSRTLFPQVLALRGDVGARA ILDALGERLALVESPDDGVLFDVDARRDLA >Mature_189_residues ATEAVVLAAGAGSRFGGGKLLTSYGRGVLLDGALAAAFAAPVRRVSVVTGADGSQIAEAALAHDPSVQIVDAHGWEEGMA ASLRAGIASLPDDTEACFIFLGDMPRVPHAILKPLCEAVLQGAPAAAPVFAGRRGHPAVLSRTLFPQVLALRGDVGARAI LDALGERLALVESPDDGVLFDVDARRDLA
Specific function: Unknown
COG id: COG2068
COG function: function code R; Uncharacterized MobA-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789242, Length=188, Percent_Identity=26.063829787234, Blast_Score=72, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017696 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19397; Mature: 19266
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATEAVVLAAGAGSRFGGGKLLTSYGRGVLLDGALAAAFAAPVRRVSVVTGADGSQIAEA CCCCEEEEEECCCCCCCCCHHHHHCCCCEEEHHHHHHHHHHHHHHEEEEECCCHHHHHHH ALAHDPSVQIVDAHGWEEGMAASLRAGIASLPDDTEACFIFLGDMPRVPHAILKPLCEAV HHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHH LQGAPAAAPVFAGRRGHPAVLSRTLFPQVLALRGDVGARAILDALGERLALVESPDDGVL HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEEECCCCCEE FDVDARRDLA EEECCCCCCC >Mature Secondary Structure ATEAVVLAAGAGSRFGGGKLLTSYGRGVLLDGALAAAFAAPVRRVSVVTGADGSQIAEA CCCEEEEEECCCCCCCCCHHHHHCCCCEEEHHHHHHHHHHHHHHEEEEECCCHHHHHHH ALAHDPSVQIVDAHGWEEGMAASLRAGIASLPDDTEACFIFLGDMPRVPHAILKPLCEAV HHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHH LQGAPAAAPVFAGRRGHPAVLSRTLFPQVLALRGDVGARAILDALGERLALVESPDDGVL HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEEECCCCCEE FDVDARRDLA EEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]