| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
Click here to switch to the map view.
The map label for this gene is 197103739
Identifier: 197103739
GI number: 197103739
Start: 269355
End: 270218
Strand: Reverse
Name: 197103739
Synonym: PHZ_c0273
Alternate gene names: NA
Gene position: 270218-269355 (Counterclockwise)
Preceding gene: 197103741
Following gene: 197103735
Centisome position: 6.76
GC content: 74.31
Gene sequence:
>864_bases ATGACATCTCCGCTCAGCAAGCTCGGCCTCGGTTCCGGGCAATTCGGCTTCGACCAGCCGGCCCTGCGCGGCCGGCCGCG CGAGGCCGAGGCCCGTGACATCCTGTCGATCGCCGCGCGCGCGGGGCTGGGGGTGCTCGAGATCGGCCGCCACAGCCACA CCGCCGAGGCCATGCTGGGCCAGGCGCTGCCGCGCCCCTGCCCGTTCCGCGTCACCCTCACCACCGTGCGTCCCGACCGA GGCCCCGATCTCGTCGAGGCCGAACTGCGCGCCCAGATGCGCCGCATGGGCGTGGAGCGGGTGGACACGGTGCTCGCGCC CTCGGCCACCGATCTCTTCTCGCCGATGGGTCCCCACCTGTGGGAGCGCCTGCGCGCCCTGAAGGACCAGGGCCTGTGCG CCCGGATCGGCGTCTCGGTCTACGCCTCCGACGATCCGGTCGGCCTGGCCAAGCGCTTCAAGCCCGACGTCGTCCAGGCG CCGGCCTCGCTGCTGGACCAGCGCCTGCTGATCGACGGCACCCTGGCCGAGCTCGCCTCGATGGGCGTCGAGGTGCACCT GCGCTCGATCTTCCTGAACGGCGTGCTGTTCCTGCCGCCCGACCGGGCGCCCAGCCACCTGAAGGCCGCCGCCGGCCGCA TCAGCCGCGCCCGTCGCCTGATCGCCGAAGGCCGCTCCGACCCGCTGCAGGCGGCCCTGGGCTTTGCGCTCTCGCGCCCC GAGGCCTCGGCGGTGCTGGTAGGCGTCGGCTCGGCGGCCGAGATGAGCGCCGTGGTGGCCGCGGCCATGAGCCCGCCGCC CGACCTCGACTGGGACGAGATGGCCCTGGACGATCCCGAAGCCCTCGCCTGGGCGGCGGCCTAG
Upstream 100 bases:
>100_bases CACGCTTTTAAGACTCACGAAAGGTCTCGGTCACGGCTTCTTAGGCCTTCCAGGTGAAGATGGCGGCTCAAGAGGACTTC ACCAAGCCTTCGACCCATCC
Downstream 100 bases:
>100_bases CCTCGCCCTTCTCCCGCACGGGAGAAGGAGGAGCTCCCTACTTCAGCGCCGACTTGTAGAGCTGGGTCAGCGCGGCCCAG GCGCGTTCCGCCTCGGCCTC
Product: bifunctional regulator KidO
Products: NA
Alternate protein names: Oxidoreductase; Aldo/Keto Reductase Family Protein; Bifunctional Regulator KidO
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MTSPLSKLGLGSGQFGFDQPALRGRPREAEARDILSIAARAGLGVLEIGRHSHTAEAMLGQALPRPCPFRVTLTTVRPDR GPDLVEAELRAQMRRMGVERVDTVLAPSATDLFSPMGPHLWERLRALKDQGLCARIGVSVYASDDPVGLAKRFKPDVVQA PASLLDQRLLIDGTLAELASMGVEVHLRSIFLNGVLFLPPDRAPSHLKAAAGRISRARRLIAEGRSDPLQAALGFALSRP EASAVLVGVGSAAEMSAVVAAAMSPPPDLDWDEMALDDPEALAWAAA
Sequences:
>Translated_287_residues MTSPLSKLGLGSGQFGFDQPALRGRPREAEARDILSIAARAGLGVLEIGRHSHTAEAMLGQALPRPCPFRVTLTTVRPDR GPDLVEAELRAQMRRMGVERVDTVLAPSATDLFSPMGPHLWERLRALKDQGLCARIGVSVYASDDPVGLAKRFKPDVVQA PASLLDQRLLIDGTLAELASMGVEVHLRSIFLNGVLFLPPDRAPSHLKAAAGRISRARRLIAEGRSDPLQAALGFALSRP EASAVLVGVGSAAEMSAVVAAAMSPPPDLDWDEMALDDPEALAWAAA >Mature_286_residues TSPLSKLGLGSGQFGFDQPALRGRPREAEARDILSIAARAGLGVLEIGRHSHTAEAMLGQALPRPCPFRVTLTTVRPDRG PDLVEAELRAQMRRMGVERVDTVLAPSATDLFSPMGPHLWERLRALKDQGLCARIGVSVYASDDPVGLAKRFKPDVVQAP ASLLDQRLLIDGTLAELASMGVEVHLRSIFLNGVLFLPPDRAPSHLKAAAGRISRARRLIAEGRSDPLQAALGFALSRPE ASAVLVGVGSAAEMSAVVAAAMSPPPDLDWDEMALDDPEALAWAAA
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30523; Mature: 30391
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPLSKLGLGSGQFGFDQPALRGRPREAEARDILSIAARAGLGVLEIGRHSHTAEAMLG CCCCHHHHCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHH QALPRPCPFRVTLTTVRPDRGPDLVEAELRAQMRRMGVERVDTVLAPSATDLFSPMGPHL HHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHCCCCHHH WERLRALKDQGLCARIGVSVYASDDPVGLAKRFKPDVVQAPASLLDQRLLIDGTLAELAS HHHHHHHHCCCCEEEECEEEEECCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH MGVEVHLRSIFLNGVLFLPPDRAPSHLKAAAGRISRARRLIAEGRSDPLQAALGFALSRP CCHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC EASAVLVGVGSAAEMSAVVAAAMSPPPDLDWDEMALDDPEALAWAAA CCCEEEEECCCHHHHHHHHHHHCCCCCCCCHHHHCCCCCHHHHCCCC >Mature Secondary Structure TSPLSKLGLGSGQFGFDQPALRGRPREAEARDILSIAARAGLGVLEIGRHSHTAEAMLG CCCHHHHCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHH QALPRPCPFRVTLTTVRPDRGPDLVEAELRAQMRRMGVERVDTVLAPSATDLFSPMGPHL HHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHCCCCHHH WERLRALKDQGLCARIGVSVYASDDPVGLAKRFKPDVVQAPASLLDQRLLIDGTLAELAS HHHHHHHHCCCCEEEECEEEEECCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH MGVEVHLRSIFLNGVLFLPPDRAPSHLKAAAGRISRARRLIAEGRSDPLQAALGFALSRP CCHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC EASAVLVGVGSAAEMSAVVAAAMSPPPDLDWDEMALDDPEALAWAAA CCCEEEEECCCHHHHHHHHHHHCCCCCCCCHHHHCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA