| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197103738
Identifier: 197103738
GI number: 197103738
Start: 268430
End: 269317
Strand: Direct
Name: 197103738
Synonym: PHZ_c0272
Alternate gene names: NA
Gene position: 268430-269317 (Clockwise)
Preceding gene: 197103737
Following gene: 197103740
Centisome position: 6.72
GC content: 72.64
Gene sequence:
>888_bases ATGTGCGACGAGGACATCAATCCGTGGCTGCCGGCCGATCCGGCGGTCTCGCGCCGGACCTTCGGCCTGGGCGCCGCCGC GGCCGTGGGCCTGACCGCCGCCGAGGCGCGGGCCCAGAGTTCGGCCCAGAGCTCGGCCGAGGCGAAGGTGGTCGAGAAGG ACGTCACGGTGAAGACGGCCGACGGGGTCTCCGACGCGGCCCTCTTCCACCCCGCGGGCAAGGGCCCGTGGCCGGCGGTG CTGGTGTGGCCCGACATCGGCGGCCTGCGCCCGGTGTTCCGCCAGATGGGCCGCCGGCTGGCGGCGCAGGGCTATGTGGT GCTGGTCCCCAACCCGTTCTACCGCTCGGCCAAGGCGACGGAGACGCAAGGCCTCAGCTTCGGCACGCCCGAGGGGCGCA AGGCGCTGTTCGGCTACCGCGAGGCGCTGATCGCCGGCGAGAACCCGTTCGAGGACGCCCGCGCCTATATCGCCTTCCTC GACGCCCAGCCGCAGACCGATCGGAAGAAGATGGCCGGCGTGCAGGGCTACTGCATGGGCGGGCCGCTGGCCTTCCAGAC GGCCGGCGCGGTCCCGGCGCGGATCGGGGCGGTCGCCTCGTTCCACGGCGGGGGCCTGACGACGAAGGACGCCGCGAGCC CGCACCTGCTCGTGCCGAAGACCAAGGCTGCCTACCTCGTGGCGGTGGCCAGGAACGACGACGCCCGCGATCCGGAATCG AAGGAGATCCTCAAGAAGACCTTCGCCGAGGCGGGCCGTCCGGCGACCGTGGAGGTCTACGACGGCGATCACGGCTGGAC CGTGCGCGGCAGCCAGGTCTACGCCGAGGCCGAGGCGGAACGCGCCTGGGCCGCGCTGACCCAGCTCTACAAGTCGGCGC TGAAGTAG
Upstream 100 bases:
>100_bases GCGCCCCAGGGAAGGGGACCGGCGGGGCTTTCCTCCCGCGCAATAACCCCGCAACAATCGCCCCCACGCTTGCGGGCGAG GACATAAGGGAGGACGCGCC
Downstream 100 bases:
>100_bases GGAGCTCCTCCTTCTCCCGTGCGGGAGAAGGGCGAGGCTAGGCCGCCGCCCAGGCGAGGGCTTCGGGATCGTCCAGGGCC ATCTCGTCCCAGTCGAGGTC
Product: dienelactone hydrolase family protein
Products: NA
Alternate protein names: Hydrolase; Carboxymethylenebutenolidase; Alanine Rich Hydrolase; Dienelactone Hydrolase Family Hydrolase; Dienelactone Hydrolase Protein; Dienelactone Hydrolase Family Protein; Dienelactone Hydrolase Domain Protein
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MCDEDINPWLPADPAVSRRTFGLGAAAAVGLTAAEARAQSSAQSSAEAKVVEKDVTVKTADGVSDAALFHPAGKGPWPAV LVWPDIGGLRPVFRQMGRRLAAQGYVVLVPNPFYRSAKATETQGLSFGTPEGRKALFGYREALIAGENPFEDARAYIAFL DAQPQTDRKKMAGVQGYCMGGPLAFQTAGAVPARIGAVASFHGGGLTTKDAASPHLLVPKTKAAYLVAVARNDDARDPES KEILKKTFAEAGRPATVEVYDGDHGWTVRGSQVYAEAEAERAWAALTQLYKSALK
Sequences:
>Translated_295_residues MCDEDINPWLPADPAVSRRTFGLGAAAAVGLTAAEARAQSSAQSSAEAKVVEKDVTVKTADGVSDAALFHPAGKGPWPAV LVWPDIGGLRPVFRQMGRRLAAQGYVVLVPNPFYRSAKATETQGLSFGTPEGRKALFGYREALIAGENPFEDARAYIAFL DAQPQTDRKKMAGVQGYCMGGPLAFQTAGAVPARIGAVASFHGGGLTTKDAASPHLLVPKTKAAYLVAVARNDDARDPES KEILKKTFAEAGRPATVEVYDGDHGWTVRGSQVYAEAEAERAWAALTQLYKSALK >Mature_295_residues MCDEDINPWLPADPAVSRRTFGLGAAAAVGLTAAEARAQSSAQSSAEAKVVEKDVTVKTADGVSDAALFHPAGKGPWPAV LVWPDIGGLRPVFRQMGRRLAAQGYVVLVPNPFYRSAKATETQGLSFGTPEGRKALFGYREALIAGENPFEDARAYIAFL DAQPQTDRKKMAGVQGYCMGGPLAFQTAGAVPARIGAVASFHGGGLTTKDAASPHLLVPKTKAAYLVAVARNDDARDPES KEILKKTFAEAGRPATVEVYDGDHGWTVRGSQVYAEAEAERAWAALTQLYKSALK
Specific function: Unknown
COG id: COG0412
COG function: function code Q; Dienelactone hydrolase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31247; Mature: 31247
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCDEDINPWLPADPAVSRRTFGLGAAAAVGLTAAEARAQSSAQSSAEAKVVEKDVTVKTA CCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEC DGVSDAALFHPAGKGPWPAVLVWPDIGGLRPVFRQMGRRLAAQGYVVLVPNPFYRSAKAT CCCCCCCEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCC ETQGLSFGTPEGRKALFGYREALIAGENPFEDARAYIAFLDAQPQTDRKKMAGVQGYCMG CCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHEEEEEEECCCCCHHHHHHCCCCCEECC GPLAFQTAGAVPARIGAVASFHGGGLTTKDAASPHLLVPKTKAAYLVAVARNDDARDPES CCEEECCCCCCHHHHHHHEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCHH KEILKKTFAEAGRPATVEVYDGDHGWTVRGSQVYAEAEAERAWAALTQLYKSALK HHHHHHHHHHCCCCEEEEEEECCCCEEEECCEEEEHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MCDEDINPWLPADPAVSRRTFGLGAAAAVGLTAAEARAQSSAQSSAEAKVVEKDVTVKTA CCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEC DGVSDAALFHPAGKGPWPAVLVWPDIGGLRPVFRQMGRRLAAQGYVVLVPNPFYRSAKAT CCCCCCCEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCC ETQGLSFGTPEGRKALFGYREALIAGENPFEDARAYIAFLDAQPQTDRKKMAGVQGYCMG CCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHEEEEEEECCCCCHHHHHHCCCCCEECC GPLAFQTAGAVPARIGAVASFHGGGLTTKDAASPHLLVPKTKAAYLVAVARNDDARDPES CCEEECCCCCCHHHHHHHEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCHH KEILKKTFAEAGRPATVEVYDGDHGWTVRGSQVYAEAEAERAWAALTQLYKSALK HHHHHHHHHHCCCCEEEEEEECCCCEEEECCEEEEHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA