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The map label for this gene is blc [H]

Identifier: 197103689

GI number: 197103689

Start: 225597

End: 226208

Strand: Direct

Name: blc [H]

Synonym: PHZ_c0223

Alternate gene names: 197103689

Gene position: 225597-226208 (Clockwise)

Preceding gene: 197103688

Following gene: 197103690

Centisome position: 5.65

GC content: 69.77

Gene sequence:

>612_bases
TTGGCCAAGAGGACGTTGCGTCTATATGTAGCGCCCGCGGCCGCCGCCCGGCCGTTCATATCCATTCGAGACGCGGGTAT
CGGTCCCGGCATGATCCAGCGCCTGATCCTTGCGGCGGCCGCCGCCCTCGCCATGGCCGCCCTGCCCGTCGCCGGCCCGC
TCCACGCCGCCGAGCCCGTCCAGAAGGTCGAGCTGACCAAGATGATGGGCCGCTGGTACGAGGTGGCCCGGGTCCCGAAC
AAGCTGCAGAACGGCTGCGAGGCCGGCGCCTCGGACTGGACGCCCCAGGCCGGCGGCTTCGCCGTGGTCCAGCGCTGCTG
GAAGGAGAAGGGCGGCCAGACGACCTGGAAGGCCAAGGCCACCGCCGACCCGTCGAACACCCGCATCAAGATGACGTTCT
TCGGCGGCCTGGTGAGCCAGGACTACAAGGTGCTGGAGCACCGCGTGGACCAGGGCTGGCTGATCCTGGCGACCGCCAAC
GGCAAGTACGTGTGGCTGATGTCGCAGAAGCCGACCCTGCCGGCGCAGGTGAAGGCCCAGGCCGTCGCCCGCATCAAGCA
GCTCGGCTTCGACCCCAACCGCCTCGAGTTCCCGGGCCCGCCGGAGACCTGA

Upstream 100 bases:

>100_bases
TGATCGCCGCGGAATAGACCCTCCGCCAGGGGGGCTGCGGGCGCCCGCCGGCCGAGGAGGCCGGCGGGCGTTCGCGTTTC
TGCAACAGAAGCGCCCAACA

Downstream 100 bases:

>100_bases
GGCCGCGACCGCCGGCCGCGCTTGCCTCCGGAACGGAGGCGGAACAGAGTGCCGGGATGGACGTCTCCGTCACCGTCGTT
TCCGTCTCGCGGCCCGAGAC

Product: outer membrane lipoprotein Blc

Products: NA

Alternate protein names: Protein vlp [H]

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MAKRTLRLYVAPAAAARPFISIRDAGIGPGMIQRLILAAAAALAMAALPVAGPLHAAEPVQKVELTKMMGRWYEVARVPN
KLQNGCEAGASDWTPQAGGFAVVQRCWKEKGGQTTWKAKATADPSNTRIKMTFFGGLVSQDYKVLEHRVDQGWLILATAN
GKYVWLMSQKPTLPAQVKAQAVARIKQLGFDPNRLEFPGPPET

Sequences:

>Translated_203_residues
MAKRTLRLYVAPAAAARPFISIRDAGIGPGMIQRLILAAAAALAMAALPVAGPLHAAEPVQKVELTKMMGRWYEVARVPN
KLQNGCEAGASDWTPQAGGFAVVQRCWKEKGGQTTWKAKATADPSNTRIKMTFFGGLVSQDYKVLEHRVDQGWLILATAN
GKYVWLMSQKPTLPAQVKAQAVARIKQLGFDPNRLEFPGPPET
>Mature_202_residues
AKRTLRLYVAPAAAARPFISIRDAGIGPGMIQRLILAAAAALAMAALPVAGPLHAAEPVQKVELTKMMGRWYEVARVPNK
LQNGCEAGASDWTPQAGGFAVVQRCWKEKGGQTTWKAKATADPSNTRIKMTFFGGLVSQDYKVLEHRVDQGWLILATANG
KYVWLMSQKPTLPAQVKAQAVARIKQLGFDPNRLEFPGPPET

Specific function: Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids [H]

COG id: COG3040

COG function: function code M; Bacterial lipocalin

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the calycin superfamily. Lipocalin family [H]

Homologues:

Organism=Escherichia coli, GI1790592, Length=165, Percent_Identity=25.4545454545455, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012674
- InterPro:   IPR011038
- InterPro:   IPR013208
- InterPro:   IPR022271
- InterPro:   IPR002446
- InterPro:   IPR022272 [H]

Pfam domain/function: PF08212 Lipocalin_2 [H]

EC number: NA

Molecular weight: Translated: 22036; Mature: 21905

Theoretical pI: Translated: 10.64; Mature: 10.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKRTLRLYVAPAAAARPFISIRDAGIGPGMIQRLILAAAAALAMAALPVAGPLHAAEPV
CCCCEEEEEEECCHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
QKVELTKMMGRWYEVARVPNKLQNGCEAGASDWTPQAGGFAVVQRCWKEKGGQTTWKAKA
HHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEC
TADPSNTRIKMTFFGGLVSQDYKVLEHRVDQGWLILATANGKYVWLMSQKPTLPAQVKAQ
CCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCHHHHHH
AVARIKQLGFDPNRLEFPGPPET
HHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AKRTLRLYVAPAAAARPFISIRDAGIGPGMIQRLILAAAAALAMAALPVAGPLHAAEPV
CCCEEEEEEECCHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
QKVELTKMMGRWYEVARVPNKLQNGCEAGASDWTPQAGGFAVVQRCWKEKGGQTTWKAKA
HHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEC
TADPSNTRIKMTFFGGLVSQDYKVLEHRVDQGWLILATANGKYVWLMSQKPTLPAQVKAQ
CCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCHHHHHH
AVARIKQLGFDPNRLEFPGPPET
HHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8514410; 10952301 [H]