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The map label for this gene is yhcM [H]

Identifier: 197103673

GI number: 197103673

Start: 204928

End: 206058

Strand: Direct

Name: yhcM [H]

Synonym: PHZ_c0207

Alternate gene names: 197103673

Gene position: 204928-206058 (Clockwise)

Preceding gene: 197103672

Following gene: 197103674

Centisome position: 5.13

GC content: 71.26

Gene sequence:

>1131_bases
ATGCCGTCCGCGCTGCAAGCCGCCTACGACGCCCGCCTCGCCGAAGGCGTGATCCGCCCGGACCCGGCCCAGGCCGCCGC
CCTGGCCGCCCTCGTCCGCCTGGAGGGGGAGCTGGCGGACGCCCAGCCCGCCTCGGGGCTCAAGGCCCTGTTCCGCAAGC
GCGCGCCCGAGAGCCGGCGGGGGGTCTACCTCGTGGGGCCCGTGGGCCGGGGAAAGTCCATGCTGATGGACCTCTTCTTC
GAGACCGCCCCGGTCGAGAAGCGGCGGCGCACGCACTTCCACGTCTTCATGGGCGAGGTCCACCGGCTGATCGACGCCTG
GCGCAAGGGCGATCCCGCCGCCCGCAAGGCGCGCTTCGGCCAGTCGAAGGGGGACGATCCGATCCCGCCCGTGGCCGACG
TGGTCGCCGAGCGGGCGAGCCTGCTCTGCTTCGACGAGTTCCAGGTCACCGACATCGCCGACGCCATGATCCTGGGCCGG
CTGTTCGAGGCGCTGTTCGATCGCGGCGTGACCCTGGTGGCCACCTCGAACCGGCTGCCCGACCAGCTCTACAAGGACGG
CATCAACCGCCAGCTCTTCCTGCCGTTCATCGAGCTCCTGAAGTCCAAGGTGGAGGTGGTCTCGGTGGCGGGGCCGCACG
ACTACCGGCTGGACCGGCTGCGGGCCGCGGGCGTCTGGTTCTCGCCCATCGACCCGGACAACGAGCGGTCCTTCGACCGG
CTGTGGCGCGAGATGCTGGGGCCCGAGGACGAGGACGAGCTGGGTGAGACGCTGGAGGTGCTGGGCCGGCGGATCACCTT
CCCGAACGCCTCGGGCGGGCTGCTGCGGGCCTCGTTCGGCAGTCTCTGCTCGGTGGCCCTGGGCCCCAACGACTACCTAG
CGCTCGCCGAGCGCTTCCACACCGTCTTCCTGGAGGGCGTGCCGAGGCTCACCCCCGCCCGGCGCGAGGAGGCCCGCCGC
TTCGTGATCCTGATCGACGCCCTCTACGAGGCGAAGACCAAGCTGATCGTGCTGGCCGAGGCCGAGCCCGTGAAGTTGTA
TCCCGAGGGGGACGGCGCCTTCGAATTCGAGCGCACGGCCTCGCGCCTGCAGGAGATGCGATCGGCCGACTGGCTGAAGG
ACAGCGCCTGA

Upstream 100 bases:

>100_bases
TCGGCCATGGTCGGGGCTCCTTCTTGCTTCCCTTCCTGAACCCCGTGGCGAAGCGGCCGTTCCTTGCGCCGGCCGTCGCC
GGCCGCTAGGCGAGGACCCG

Downstream 100 bases:

>100_bases
CGCAGGTGTTCGCCCTGCGCCCTTCTGTCGCGGCGGCGGGCCCTTACGTTTTCGTGAGTAATTGCGGGCTGCGACGATTT
GACGGCCTGCGATCACGTCT

Product: conserved predicted ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 375

Protein sequence:

>376_residues
MPSALQAAYDARLAEGVIRPDPAQAAALAALVRLEGELADAQPASGLKALFRKRAPESRRGVYLVGPVGRGKSMLMDLFF
ETAPVEKRRRTHFHVFMGEVHRLIDAWRKGDPAARKARFGQSKGDDPIPPVADVVAERASLLCFDEFQVTDIADAMILGR
LFEALFDRGVTLVATSNRLPDQLYKDGINRQLFLPFIELLKSKVEVVSVAGPHDYRLDRLRAAGVWFSPIDPDNERSFDR
LWREMLGPEDEDELGETLEVLGRRITFPNASGGLLRASFGSLCSVALGPNDYLALAERFHTVFLEGVPRLTPARREEARR
FVILIDALYEAKTKLIVLAEAEPVKLYPEGDGAFEFERTASRLQEMRSADWLKDSA

Sequences:

>Translated_376_residues
MPSALQAAYDARLAEGVIRPDPAQAAALAALVRLEGELADAQPASGLKALFRKRAPESRRGVYLVGPVGRGKSMLMDLFF
ETAPVEKRRRTHFHVFMGEVHRLIDAWRKGDPAARKARFGQSKGDDPIPPVADVVAERASLLCFDEFQVTDIADAMILGR
LFEALFDRGVTLVATSNRLPDQLYKDGINRQLFLPFIELLKSKVEVVSVAGPHDYRLDRLRAAGVWFSPIDPDNERSFDR
LWREMLGPEDEDELGETLEVLGRRITFPNASGGLLRASFGSLCSVALGPNDYLALAERFHTVFLEGVPRLTPARREEARR
FVILIDALYEAKTKLIVLAEAEPVKLYPEGDGAFEFERTASRLQEMRSADWLKDSA
>Mature_375_residues
PSALQAAYDARLAEGVIRPDPAQAAALAALVRLEGELADAQPASGLKALFRKRAPESRRGVYLVGPVGRGKSMLMDLFFE
TAPVEKRRRTHFHVFMGEVHRLIDAWRKGDPAARKARFGQSKGDDPIPPVADVVAERASLLCFDEFQVTDIADAMILGRL
FEALFDRGVTLVATSNRLPDQLYKDGINRQLFLPFIELLKSKVEVVSVAGPHDYRLDRLRAAGVWFSPIDPDNERSFDRL
WREMLGPEDEDELGETLEVLGRRITFPNASGGLLRASFGSLCSVALGPNDYLALAERFHTVFLEGVPRLTPARREEARRF
VILIDALYEAKTKLIVLAEAEPVKLYPEGDGAFEFERTASRLQEMRSADWLKDSA

Specific function: Unknown

COG id: COG1485

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AFG1 ATPase family [H]

Homologues:

Organism=Homo sapiens, GI21918872, Length=398, Percent_Identity=36.6834170854271, Blast_Score=245, Evalue=4e-65,
Organism=Escherichia coli, GI1789627, Length=378, Percent_Identity=40.7407407407407, Blast_Score=256, Evalue=2e-69,
Organism=Caenorhabditis elegans, GI17505769, Length=373, Percent_Identity=38.0697050938338, Blast_Score=253, Evalue=1e-67,
Organism=Saccharomyces cerevisiae, GI6320783, Length=401, Percent_Identity=32.6683291770574, Blast_Score=189, Evalue=5e-49,
Organism=Drosophila melanogaster, GI20129913, Length=346, Percent_Identity=36.1271676300578, Blast_Score=217, Evalue=1e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005654 [H]

Pfam domain/function: PF03969 AFG1_ATPase [H]

EC number: NA

Molecular weight: Translated: 41919; Mature: 41788

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSALQAAYDARLAEGVIRPDPAQAAALAALVRLEGELADAQPASGLKALFRKRAPESRR
CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCC
GVYLVGPVGRGKSMLMDLFFETAPVEKRRRTHFHVFMGEVHRLIDAWRKGDPAARKARFG
CEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC
QSKGDDPIPPVADVVAERASLLCFDEFQVTDIADAMILGRLFEALFDRGVTLVATSNRLP
CCCCCCCCCHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCC
DQLYKDGINRQLFLPFIELLKSKVEVVSVAGPHDYRLDRLRAAGVWFSPIDPDNERSFDR
HHHHHCCCCCCHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHCCCEECCCCCCCCHHHHH
LWREMLGPEDEDELGETLEVLGRRITFPNASGGLLRASFGSLCSVALGPNDYLALAERFH
HHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHEEEECCCHHHHHHHHHH
TVFLEGVPRLTPARREEARRFVILIDALYEAKTKLIVLAEAEPVKLYPEGDGAFEFERTA
HHHHHCCCCCCCHHHHHCCEEEEEHHHHHHCCCCEEEEECCCCEEEEECCCCCCHHHHHH
SRLQEMRSADWLKDSA
HHHHHHHHHCHHCCCC
>Mature Secondary Structure 
PSALQAAYDARLAEGVIRPDPAQAAALAALVRLEGELADAQPASGLKALFRKRAPESRR
CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCC
GVYLVGPVGRGKSMLMDLFFETAPVEKRRRTHFHVFMGEVHRLIDAWRKGDPAARKARFG
CEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC
QSKGDDPIPPVADVVAERASLLCFDEFQVTDIADAMILGRLFEALFDRGVTLVATSNRLP
CCCCCCCCCHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCC
DQLYKDGINRQLFLPFIELLKSKVEVVSVAGPHDYRLDRLRAAGVWFSPIDPDNERSFDR
HHHHHCCCCCCHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHCCCEECCCCCCCCHHHHH
LWREMLGPEDEDELGETLEVLGRRITFPNASGGLLRASFGSLCSVALGPNDYLALAERFH
HHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHEEEECCCHHHHHHHHHH
TVFLEGVPRLTPARREEARRFVILIDALYEAKTKLIVLAEAEPVKLYPEGDGAFEFERTA
HHHHHCCCCCCCHHHHHCCEEEEEHHHHHHCCCCEEEEECCCCEEEEECCCCCCHHHHHH
SRLQEMRSADWLKDSA
HHHHHHHHHCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]