| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is folC [H]
Identifier: 197103664
GI number: 197103664
Start: 190956
End: 192290
Strand: Direct
Name: folC [H]
Synonym: PHZ_c0198
Alternate gene names: 197103664
Gene position: 190956-192290 (Clockwise)
Preceding gene: 197103663
Following gene: 197103672
Centisome position: 4.78
GC content: 74.16
Gene sequence:
>1335_bases ATGACGTCCGCCGACCCCGGTTTCGACCCGATCCGCGCCTCGGACGCGGTGATCCAGCGGCTGCGCCGCAGCCACCCCAC GCTCATCGACCTGACGACGGGCCGCGTCGAGCGCCTGCTGGCGGCGCTGGACCATCCCGAACGGCGGCTTCCGCCGGTGA TCCACGTGGCCGGCACCAACGGCAAGGGCTCGACCGTCGCCTACCTGCGCGCCATCGGCGAGGCGGCGGGCCTGCGGGTC CACACCCTGACCTCGCCCCACCTCGTGCGGTTCGCCGAGCGGATCCGGCTGGCGGGCCGGCTGATCAGCGACGAGCAGCT CCTGGCCCTCACCGAGCGGGTCGAGGCGGCCAATGCGGACCAGCCGATCAGCTTCTTCGAGATCACGACGGTGCTGGCCC TGCTGGCCTTCGCCGAGACGCCGGCCGACCTGTGCGTGGTCGAGGTGGGGCTGGGCGGCCGGTTCGACGCCACCAACGTC TTCGACGCCCCGGCGGTCAGCGTCATCACGCCCGTGGACTACGACCACCTGGAGATGCTGGGCCCCGGCCTCGCCAAGAT CGCCTGGGAGAAGGCCGGGATCATCAAGCGCGGGCGGCCGGTGGTGGTGGCGCGCCAGCTGGACGAGGCGCTGGAGATGA TCGAGCGCGAGGCCGACGACCGCATGGCGCCGATGCTGCTGATGGGCCGCGACTTCGACGCCTGGGAGGAGCGCGGCCGG CTGCTGGTGCAGATGCCCGAGCGGCTGCTGGACCTGCCGCCGCCCAGCCTGTTCGGCGGCTACCAGTTCGCCAACGCGGG CCTGGCCGTCGCCGCGGCCCTGACCTTCGACCACGACCTCCCGGACGAGGTGCTGGGCGACGGCGTCGCCTCGGCCGTCT GGCCGGCGCGGATGCAGCGGCTGACCGCCGGGCCCCTGTTCGAGCTGGCGCGCGCCCGCGGCGCCGACATCTGGCTGGAC GGCGGCCACAACCCGCATGCGGGCCGCGCGCTCGCCGAGGCCGCCTCGCGCATCGTCGACCGCGACCCGCGGCCGCTGAC GCTGGTGGCGGGCATGTTCGCCCGCAAGGACGCCGAGGGCTTCTTCCGCCCCTTCGCCGAGATGAAGCCGCGGGTGATCG CCACCACCTTCGACTCGCCCCAGGCGGCGAGCGCCGAGGACATCGCCGTGGCGGCGGTGAAGGCGGGCCTGCCGGCCGAG ATGTCGCCGAACGTCGAGGACGCCGTGCGGCGGGCGCTTTCGGTGGACGGGCCCGCGCCGCACGTGCTGGTCTGCGGCGG CCTGCATTTCGCGGGCGAGGTGCTCGCCATGAGCCCGGAGACCTGGCCCGCCTGA
Upstream 100 bases:
>100_bases GAAGACGCTTATGATGGGGCGTGAACGCCTTTCCCCCGCCGCCTAGGTCCAAGCCGAGCCTGACCCCCGCTCCCCCCATC GGAGAGGACGGGATAGGGCC
Downstream 100 bases:
>100_bases TGCGTGCAAAGCCCTACAGCCTGCGCTTCGCCCTGCCGCGGCACTACCTGATCACCCTGGCGATCGCCCTGGTGGCGCTG TGGGGACTGGTGGAGGTGTT
Product: bifunctional dihydrofolate synthase/folylpolyglutamate synthase
Products: NA
Alternate protein names: Folylpoly-gamma-glutamate synthetase; FPGS; Tetrahydrofolate synthase; Tetrahydrofolylpolyglutamate synthase [H]
Number of amino acids: Translated: 444; Mature: 443
Protein sequence:
>444_residues MTSADPGFDPIRASDAVIQRLRRSHPTLIDLTTGRVERLLAALDHPERRLPPVIHVAGTNGKGSTVAYLRAIGEAAGLRV HTLTSPHLVRFAERIRLAGRLISDEQLLALTERVEAANADQPISFFEITTVLALLAFAETPADLCVVEVGLGGRFDATNV FDAPAVSVITPVDYDHLEMLGPGLAKIAWEKAGIIKRGRPVVVARQLDEALEMIEREADDRMAPMLLMGRDFDAWEERGR LLVQMPERLLDLPPPSLFGGYQFANAGLAVAAALTFDHDLPDEVLGDGVASAVWPARMQRLTAGPLFELARARGADIWLD GGHNPHAGRALAEAASRIVDRDPRPLTLVAGMFARKDAEGFFRPFAEMKPRVIATTFDSPQAASAEDIAVAAVKAGLPAE MSPNVEDAVRRALSVDGPAPHVLVCGGLHFAGEVLAMSPETWPA
Sequences:
>Translated_444_residues MTSADPGFDPIRASDAVIQRLRRSHPTLIDLTTGRVERLLAALDHPERRLPPVIHVAGTNGKGSTVAYLRAIGEAAGLRV HTLTSPHLVRFAERIRLAGRLISDEQLLALTERVEAANADQPISFFEITTVLALLAFAETPADLCVVEVGLGGRFDATNV FDAPAVSVITPVDYDHLEMLGPGLAKIAWEKAGIIKRGRPVVVARQLDEALEMIEREADDRMAPMLLMGRDFDAWEERGR LLVQMPERLLDLPPPSLFGGYQFANAGLAVAAALTFDHDLPDEVLGDGVASAVWPARMQRLTAGPLFELARARGADIWLD GGHNPHAGRALAEAASRIVDRDPRPLTLVAGMFARKDAEGFFRPFAEMKPRVIATTFDSPQAASAEDIAVAAVKAGLPAE MSPNVEDAVRRALSVDGPAPHVLVCGGLHFAGEVLAMSPETWPA >Mature_443_residues TSADPGFDPIRASDAVIQRLRRSHPTLIDLTTGRVERLLAALDHPERRLPPVIHVAGTNGKGSTVAYLRAIGEAAGLRVH TLTSPHLVRFAERIRLAGRLISDEQLLALTERVEAANADQPISFFEITTVLALLAFAETPADLCVVEVGLGGRFDATNVF DAPAVSVITPVDYDHLEMLGPGLAKIAWEKAGIIKRGRPVVVARQLDEALEMIEREADDRMAPMLLMGRDFDAWEERGRL LVQMPERLLDLPPPSLFGGYQFANAGLAVAAALTFDHDLPDEVLGDGVASAVWPARMQRLTAGPLFELARARGADIWLDG GHNPHAGRALAEAASRIVDRDPRPLTLVAGMFARKDAEGFFRPFAEMKPRVIATTFDSPQAASAEDIAVAAVKAGLPAEM SPNVEDAVRRALSVDGPAPHVLVCGGLHFAGEVLAMSPETWPA
Specific function: Conversion of folates to polyglutamate derivatives. It preferes 5,10-methylenetetrahydrofolate, rather than 10- formyltetrahydrofolate as folate substrate [H]
COG id: COG0285
COG function: function code H; Folylpolyglutamate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the folylpolyglutamate synthase family [H]
Homologues:
Organism=Homo sapiens, GI66932984, Length=328, Percent_Identity=30.1829268292683, Blast_Score=132, Evalue=6e-31, Organism=Homo sapiens, GI66932990, Length=328, Percent_Identity=30.1829268292683, Blast_Score=132, Evalue=6e-31, Organism=Escherichia coli, GI1788654, Length=426, Percent_Identity=30.5164319248826, Blast_Score=149, Evalue=3e-37, Organism=Caenorhabditis elegans, GI17553150, Length=365, Percent_Identity=28.2191780821918, Blast_Score=147, Evalue=1e-35, Organism=Caenorhabditis elegans, GI71984923, Length=365, Percent_Identity=28.2191780821918, Blast_Score=147, Evalue=1e-35, Organism=Caenorhabditis elegans, GI17553148, Length=365, Percent_Identity=28.2191780821918, Blast_Score=147, Evalue=1e-35, Organism=Saccharomyces cerevisiae, GI6323760, Length=428, Percent_Identity=28.7383177570093, Blast_Score=155, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6324815, Length=453, Percent_Identity=24.7240618101545, Blast_Score=117, Evalue=5e-27, Organism=Drosophila melanogaster, GI24641571, Length=380, Percent_Identity=27.6315789473684, Blast_Score=124, Evalue=2e-28, Organism=Drosophila melanogaster, GI24581568, Length=207, Percent_Identity=31.4009661835749, Blast_Score=102, Evalue=7e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018109 - InterPro: IPR001645 - InterPro: IPR004101 - InterPro: IPR013221 [H]
Pfam domain/function: PF02875 Mur_ligase_C; PF08245 Mur_ligase_M [H]
EC number: =6.3.2.17 [H]
Molecular weight: Translated: 47789; Mature: 47658
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSADPGFDPIRASDAVIQRLRRSHPTLIDLTTGRVERLLAALDHPERRLPPVIHVAGTN CCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHCCCHHHCCCEEEEECCC GKGSTVAYLRAIGEAAGLRVHTLTSPHLVRFAERIRLAGRLISDEQLLALTERVEAANAD CCCCHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC QPISFFEITTVLALLAFAETPADLCVVEVGLGGRFDATNVFDAPAVSVITPVDYDHLEML CCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCHHHHHHH GPGLAKIAWEKAGIIKRGRPVVVARQLDEALEMIEREADDRMAPMLLMGRDFDAWEERGR CCCHHHHHHHHCCHHHCCCCEEEHHHHHHHHHHHHHHHCHHHCCHHEECCCCHHHHHCCC LLVQMPERLLDLPPPSLFGGYQFANAGLAVAAALTFDHDLPDEVLGDGVASAVWPARMQR EEEECHHHHHCCCCCHHHCCCHHHCCCCEEEEEECCCCCCCHHHHCCCHHHHHHHHHHHH LTAGPLFELARARGADIWLDGGHNPHAGRALAEAASRIVDRDPRPLTLVAGMFARKDAEG HCCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHCCHHH FFRPFAEMKPRVIATTFDSPQAASAEDIAVAAVKAGLPAEMSPNVEDAVRRALSVDGPAP HHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCC HVLVCGGLHFAGEVLAMSPETWPA EEEEECCHHHHCCEEEECCCCCCC >Mature Secondary Structure TSADPGFDPIRASDAVIQRLRRSHPTLIDLTTGRVERLLAALDHPERRLPPVIHVAGTN CCCCCCCCCCCHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHCCCHHHCCCEEEEECCC GKGSTVAYLRAIGEAAGLRVHTLTSPHLVRFAERIRLAGRLISDEQLLALTERVEAANAD CCCCHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC QPISFFEITTVLALLAFAETPADLCVVEVGLGGRFDATNVFDAPAVSVITPVDYDHLEML CCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCHHHHHHH GPGLAKIAWEKAGIIKRGRPVVVARQLDEALEMIEREADDRMAPMLLMGRDFDAWEERGR CCCHHHHHHHHCCHHHCCCCEEEHHHHHHHHHHHHHHHCHHHCCHHEECCCCHHHHHCCC LLVQMPERLLDLPPPSLFGGYQFANAGLAVAAALTFDHDLPDEVLGDGVASAVWPARMQR EEEECHHHHHCCCCCHHHCCCHHHCCCCEEEEEECCCCCCCHHHHCCCHHHHHHHHHHHH LTAGPLFELARARGADIWLDGGHNPHAGRALAEAASRIVDRDPRPLTLVAGMFARKDAEG HCCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHCCHHH FFRPFAEMKPRVIATTFDSPQAASAEDIAVAAVKAGLPAEMSPNVEDAVRRALSVDGPAP HHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCC HVLVCGGLHFAGEVLAMSPETWPA EEEEECCHHHHCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8419299; 9384377; 2553669 [H]