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The map label for this gene is yfdH [C]

Identifier: 197103651

GI number: 197103651

Start: 177979

End: 178953

Strand: Reverse

Name: yfdH [C]

Synonym: PHZ_c0185

Alternate gene names: 197103651

Gene position: 178953-177979 (Counterclockwise)

Preceding gene: 197103652

Following gene: 197103650

Centisome position: 4.48

GC content: 71.9

Gene sequence:

>975_bases
GTGATCCGCAGCCGCCAGGGCAAGCGCCTGTCCCTCGTAACGCCCATGCACGACGAGGCGCCCGCGCTGGACGCCTTCTT
CGCCCGGGTGGACGCCGCCGCCGCCGGCCTGGGGGTCGAGCTCGAGATCGTCTGCGTCGACGACGGCAGCCGCGACGACA
CCTATGAGCGCCTCGCCGCGCGCGCCGCCGCCGACCCGCGCATCCGGCTGATCGGCCTCTCGCGCAACTTCGGCAAGGAG
GCGGCGCTCACCGCCGGGCTAGACGCGGCCAGCGGCGACATGGTCGTTCCGATCGACGCCGACCTGCAGGACCCGCCCGA
GCTGATCGCCGAGTTCCTGGCGCTGTGGGAGCAGGGCTACGACGTCGTCTACGGGGTGCGCGCCGACCGGGCCAGCGACA
GCGCCGCCAAGCGGGTCACCGCCGGCGCCTTCTACCGCGTCTTCAACCTCGTCTCCGACCACCCGATCCCGGCCAGCGCC
GGGGACTTCCGCCTGATGGACCGGCAGGTGGTCGAGGCCCTGAAGCGGCTGCCCGAGCGCAACCGGTTCATGAAGGGCCT
GTTCGCCTGGGTCGGCTTCCGGCAGGTGGGCGTGCCCTACGTCCGTCCGCCCCGCTCGGCGGGGACCAGCTCGTGGGGCT
GGCTGAAGCTGTGGCGCTTCGCCGTCGACGGGATCACCGCCTTCACCACCGCGCCCTTGCGGGTGTGGAGCGTGGTCGGC
GTGCTCGCGGCCCTGGCCGCCATCCTCTTCGGGCTGGTCATCATCGTGCGGGTGCTGGTCATCGGCCGGGACGTGCCGGG
CTACGCCTCGCTGATGGTCGTGCTGCTGTTCGGCTTCGCCCTGCAAATGATCGCCCTCGGCGTCCTCGGCGAGTACGTCG
GGCGGATGTACGAGGAGGTGAAGCGGCGGCCGATCTACATGGTCCGCCGGAAAGCCGGCTTCGGGGACGAGCCCGGCTTC
GGGGACAAGCCTTGA

Upstream 100 bases:

>100_bases
CGGGCGATGCGCGCTACATCTTCCCCTCGAACGTGCTCTGCCTGCTGCTGATCCTCGCCGGCGCGGGCCTGCTGCTGCGC
CGCCCCGGGGAGGTCCGGCC

Downstream 100 bases:

>100_bases
GCGCGCGCATCCTGGCCCGGCAGGGCGTCCTGTTCGCGATCTTCGGCGTCATCGCCACCGGCGTGCACGTGACCGTGGCC
CTGGCCGCCCACCATCTGGC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MIRSRQGKRLSLVTPMHDEAPALDAFFARVDAAAAGLGVELEIVCVDDGSRDDTYERLAARAAADPRIRLIGLSRNFGKE
AALTAGLDAASGDMVVPIDADLQDPPELIAEFLALWEQGYDVVYGVRADRASDSAAKRVTAGAFYRVFNLVSDHPIPASA
GDFRLMDRQVVEALKRLPERNRFMKGLFAWVGFRQVGVPYVRPPRSAGTSSWGWLKLWRFAVDGITAFTTAPLRVWSVVG
VLAALAAILFGLVIIVRVLVIGRDVPGYASLMVVLLFGFALQMIALGVLGEYVGRMYEEVKRRPIYMVRRKAGFGDEPGF
GDKP

Sequences:

>Translated_324_residues
MIRSRQGKRLSLVTPMHDEAPALDAFFARVDAAAAGLGVELEIVCVDDGSRDDTYERLAARAAADPRIRLIGLSRNFGKE
AALTAGLDAASGDMVVPIDADLQDPPELIAEFLALWEQGYDVVYGVRADRASDSAAKRVTAGAFYRVFNLVSDHPIPASA
GDFRLMDRQVVEALKRLPERNRFMKGLFAWVGFRQVGVPYVRPPRSAGTSSWGWLKLWRFAVDGITAFTTAPLRVWSVVG
VLAALAAILFGLVIIVRVLVIGRDVPGYASLMVVLLFGFALQMIALGVLGEYVGRMYEEVKRRPIYMVRRKAGFGDEPGF
GDKP
>Mature_324_residues
MIRSRQGKRLSLVTPMHDEAPALDAFFARVDAAAAGLGVELEIVCVDDGSRDDTYERLAARAAADPRIRLIGLSRNFGKE
AALTAGLDAASGDMVVPIDADLQDPPELIAEFLALWEQGYDVVYGVRADRASDSAAKRVTAGAFYRVFNLVSDHPIPASA
GDFRLMDRQVVEALKRLPERNRFMKGLFAWVGFRQVGVPYVRPPRSAGTSSWGWLKLWRFAVDGITAFTTAPLRVWSVVG
VLAALAAILFGLVIIVRVLVIGRDVPGYASLMVVLLFGFALQMIALGVLGEYVGRMYEEVKRRPIYMVRRKAGFGDEPGF
GDKP

Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. GtrB subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788692, Length=302, Percent_Identity=45.364238410596, Blast_Score=280, Evalue=8e-77,
Organism=Escherichia coli, GI1788588, Length=309, Percent_Identity=32.0388349514563, Blast_Score=173, Evalue=2e-44,
Organism=Drosophila melanogaster, GI24585265, Length=243, Percent_Identity=27.5720164609054, Blast_Score=74, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 35461; Mature: 35461

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRSRQGKRLSLVTPMHDEAPALDAFFARVDAAAAGLGVELEIVCVDDGSRDDTYERLAA
CCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHH
RAAADPRIRLIGLSRNFGKEAALTAGLDAASGDMVVPIDADLQDPPELIAEFLALWEQGY
HHCCCCCEEEEECCCCCCCHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCC
DVVYGVRADRASDSAAKRVTAGAFYRVFNLVSDHPIPASAGDFRLMDRQVVEALKRLPER
CEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCHHH
NRFMKGLFAWVGFRQVGVPYVRPPRSAGTSSWGWLKLWRFAVDGITAFTTAPLRVWSVVG
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLAALAAILFGLVIIVRVLVIGRDVPGYASLMVVLLFGFALQMIALGVLGEYVGRMYEEV
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRRPIYMVRRKAGFGDEPGFGDKP
HHCCHHEEHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MIRSRQGKRLSLVTPMHDEAPALDAFFARVDAAAAGLGVELEIVCVDDGSRDDTYERLAA
CCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHH
RAAADPRIRLIGLSRNFGKEAALTAGLDAASGDMVVPIDADLQDPPELIAEFLALWEQGY
HHCCCCCEEEEECCCCCCCHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCC
DVVYGVRADRASDSAAKRVTAGAFYRVFNLVSDHPIPASAGDFRLMDRQVVEALKRLPER
CEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCHHH
NRFMKGLFAWVGFRQVGVPYVRPPRSAGTSSWGWLKLWRFAVDGITAFTTAPLRVWSVVG
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLAALAAILFGLVIIVRVLVIGRDVPGYASLMVVLLFGFALQMIALGVLGEYVGRMYEEV
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRRPIYMVRRKAGFGDEPGFGDKP
HHCCHHEEHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]