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The map label for this gene is betI [C]

Identifier: 197103635

GI number: 197103635

Start: 165545

End: 166213

Strand: Direct

Name: betI [C]

Synonym: PHZ_c0169

Alternate gene names: 197103635

Gene position: 165545-166213 (Clockwise)

Preceding gene: 197103632

Following gene: 197103636

Centisome position: 4.14

GC content: 73.84

Gene sequence:

>669_bases
ATGAGCGAGACCCTGCAGGTTCCGGGCCTTCCACCCGGCCTCACGCCAGCGCGGCGGACCCAGGCCGAGCGGAGCGACGA
GTCCGGGCGGCGCCTGCTGGACGCGACGGCGAAGGTGGTGGCCGAGGGCGGGGTCTCGGCGGCGACGTTCGAGGCCATCG
GGCGCAGCGCCGGCTACAGCCGGGGCCTGGCGACCCAGAAGTTCGGCTCGAAGGACGGGCTGATCGAGGCGCTGATCGCC
GACCTGCAGGAACGCCAGGCGCAGATGCTGGTCCTGCACCACATCGACGACCGGCCGGGCCTGGAGGCGGTGCTCGCCTA
CGTGGACCTCTACCTTAGCCACCTGCGCGAGGAGCAGGCGACCCGGGCCTATTTCATGCTGCTGGCCGGGGCGGTGGCCG
ACGCCTCGCCCCTGCGGGCGGCGTTCGCCCGCACCCACGAGGCGGTGAAGGCGAGGCTCGCCGAGCTGGTCATGCGCGGC
CAGGCCGAGGGCGGGATCCGGCGCGAGATCGACCCGCAGTCGGCGGCGCTGATGGTCGGCGGCCTGCTGCTGGGCCTGTC
GGTGCAGTGGCTGGTCGACCCGGACATCGACCTGGACGCGATCCGCCGCACCAGCCTCGACACCCTTCGCCTGGCCTTCG
CGCCCGGCCCCGCGACGGAGCACGCCTGA

Upstream 100 bases:

>100_bases
ATCATGGGCGCTGTTCCTCCGGGTCCCGCTGTGTCCGCGGGCTTGCCCTACGGCATAGGCGCAACTTGCTATACGTTCAA
CAAATAAGTACCAGGGTTAC

Downstream 100 bases:

>100_bases
CGTGAGCGCCGAGCCCAACAAGACCGAGCCCTACAAGACCTGGCAGTGCCGGACCTGCGGCTATCTCTACAGCGAAGCCG
ACGGCGATCCGGGCGAGGGC

Product: transcriptional regulator, TetR family

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Regulatory Protein TetR

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MSETLQVPGLPPGLTPARRTQAERSDESGRRLLDATAKVVAEGGVSAATFEAIGRSAGYSRGLATQKFGSKDGLIEALIA
DLQERQAQMLVLHHIDDRPGLEAVLAYVDLYLSHLREEQATRAYFMLLAGAVADASPLRAAFARTHEAVKARLAELVMRG
QAEGGIRREIDPQSAALMVGGLLLGLSVQWLVDPDIDLDAIRRTSLDTLRLAFAPGPATEHA

Sequences:

>Translated_222_residues
MSETLQVPGLPPGLTPARRTQAERSDESGRRLLDATAKVVAEGGVSAATFEAIGRSAGYSRGLATQKFGSKDGLIEALIA
DLQERQAQMLVLHHIDDRPGLEAVLAYVDLYLSHLREEQATRAYFMLLAGAVADASPLRAAFARTHEAVKARLAELVMRG
QAEGGIRREIDPQSAALMVGGLLLGLSVQWLVDPDIDLDAIRRTSLDTLRLAFAPGPATEHA
>Mature_221_residues
SETLQVPGLPPGLTPARRTQAERSDESGRRLLDATAKVVAEGGVSAATFEAIGRSAGYSRGLATQKFGSKDGLIEALIAD
LQERQAQMLVLHHIDDRPGLEAVLAYVDLYLSHLREEQATRAYFMLLAGAVADASPLRAAFARTHEAVKARLAELVMRGQ
AEGGIRREIDPQSAALMVGGLLLGLSVQWLVDPDIDLDAIRRTSLDTLRLAFAPGPATEHA

Specific function: Repressor Involved In Choline Regulation Of The Bet Genes. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23802; Mature: 23671

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETLQVPGLPPGLTPARRTQAERSDESGRRLLDATAKVVAEGGVSAATFEAIGRSAGYS
CCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
RGLATQKFGSKDGLIEALIADLQERQAQMLVLHHIDDRPGLEAVLAYVDLYLSHLREEQA
CCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
TRAYFMLLAGAVADASPLRAAFARTHEAVKARLAELVMRGQAEGGIRREIDPQSAALMVG
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
GLLLGLSVQWLVDPDIDLDAIRRTSLDTLRLAFAPGPATEHA
HHHHHCEEEEEECCCCCHHHHHHHCHHHEEEEECCCCCCCCC
>Mature Secondary Structure 
SETLQVPGLPPGLTPARRTQAERSDESGRRLLDATAKVVAEGGVSAATFEAIGRSAGYS
CCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
RGLATQKFGSKDGLIEALIADLQERQAQMLVLHHIDDRPGLEAVLAYVDLYLSHLREEQA
CCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
TRAYFMLLAGAVADASPLRAAFARTHEAVKARLAELVMRGQAEGGIRREIDPQSAALMVG
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
GLLLGLSVQWLVDPDIDLDAIRRTSLDTLRLAFAPGPATEHA
HHHHHCEEEEEECCCCCHHHHHHHCHHHEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA