| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is glpE [C]
Identifier: 197103533
GI number: 197103533
Start: 63394
End: 63756
Strand: Reverse
Name: glpE [C]
Synonym: PHZ_c0067
Alternate gene names: 197103533
Gene position: 63756-63394 (Counterclockwise)
Preceding gene: 197103539
Following gene: 197103532
Centisome position: 1.6
GC content: 72.18
Gene sequence:
>363_bases ATGTTCGGACGCCAGAGGATCAAGGACCTGACCCCCAACGAGGTCAGGGCGAAGATGCAGCACCGGGAGATCGTGCTGAT CGACGTGCGCGAGCCGCCCGAGTTCGCCGCCGAGCGCATCCATGGCGCGCTGAACTTCCCGCTGTCGACCTTCGACCCCA GGGCCCTGCCCGCCGGCGGCGACCGCCCGCTGGTGTTCCAGTGCGGCTCGGGCAAGCGGTCGGCCATGGCTGTCGAGCGC TGCCGGCAAGAAGGCGTGGCCGCCGAAGCGCACCTGGCCGGCGGCATCGCCGCCTGGCGCAGCGAGGGCCTGCCCACCAT CCGCTTCGACCCGGCGACGGGCCAGGTCGTGGACGCCGGCTGA
Upstream 100 bases:
>100_bases CCGGCCGCGGCGAGCCTAATGAAGCTGCCCTTGATCGGGCTTGATATATCAATATATGCGCAACTACGCATATACAAGCC CATCAACCGGAGACGCCGCG
Downstream 100 bases:
>100_bases CCCGCGATGATCCGCCCCCTCATCCCCGCAGCCCTCACGGCCGCCGCCCTGGCGCTGGCGGCCTGCGGCTCCGAGCCGAA GCCGGCCGAGACCCCGGTGG
Product: rhodanese-related sulfurtransferase
Products: H+; Sulfite; Thiocyanate [C]
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MFGRQRIKDLTPNEVRAKMQHREIVLIDVREPPEFAAERIHGALNFPLSTFDPRALPAGGDRPLVFQCGSGKRSAMAVER CRQEGVAAEAHLAGGIAAWRSEGLPTIRFDPATGQVVDAG
Sequences:
>Translated_120_residues MFGRQRIKDLTPNEVRAKMQHREIVLIDVREPPEFAAERIHGALNFPLSTFDPRALPAGGDRPLVFQCGSGKRSAMAVER CRQEGVAAEAHLAGGIAAWRSEGLPTIRFDPATGQVVDAG >Mature_120_residues MFGRQRIKDLTPNEVRAKMQHREIVLIDVREPPEFAAERIHGALNFPLSTFDPRALPAGGDRPLVFQCGSGKRSAMAVER CRQEGVAAEAHLAGGIAAWRSEGLPTIRFDPATGQVVDAG
Specific function: Catalyzes, Although With Low Efficiency, The Sulfur Transfer Reaction From Thiosulfate To Cyanide. The Relatively Low Affinity Of Glpe For Both Thiosulfate And Cyanide Suggests That These Compounds Are Not The Physiological Substrates. Thioredoxin 1 Or Re
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 rhodanese domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021309 - InterPro: IPR001763 [H]
Pfam domain/function: PF11127 DUF2892; PF00581 Rhodanese [H]
EC number: 2.8.1.1 [C]
Molecular weight: Translated: 13061; Mature: 13061
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGRQRIKDLTPNEVRAKMQHREIVLIDVREPPEFAAERIHGALNFPLSTFDPRALPAGG CCCCHHHCCCCHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC DRPLVFQCGSGKRSAMAVERCRQEGVAAEAHLAGGIAAWRSEGLPTIRFDPATGQVVDAG CCCEEEECCCCCCHHHHHHHHHHCCCCCHHHHHCCHHHHHCCCCCEEEECCCCCEEEECC >Mature Secondary Structure MFGRQRIKDLTPNEVRAKMQHREIVLIDVREPPEFAAERIHGALNFPLSTFDPRALPAGG CCCCHHHCCCCHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC DRPLVFQCGSGKRSAMAVERCRQEGVAAEAHLAGGIAAWRSEGLPTIRFDPATGQVVDAG CCCEEEECCCCCCHHHHHHHHHHCCCCCHHHHHCCHHHHHCCCCCEEEECCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Cyanide; Thiosulfate [C]
Specific reaction: Cyanide + Thiosulfate --> H+ + Sulfite + Thiocyanate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]