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The map label for this gene is dadA

Identifier: 197103526

GI number: 197103526

Start: 54084

End: 55364

Strand: Reverse

Name: dadA

Synonym: PHZ_c0060

Alternate gene names: 197103526

Gene position: 55364-54084 (Counterclockwise)

Preceding gene: 197103527

Following gene: 197103523

Centisome position: 1.39

GC content: 73.38

Gene sequence:

>1281_bases
ATGAAGGTTGTGGTGCTGGGCGCCGGCGTGATCGGCGTGACGACCGCCTGGTATCTGGCCAAGGCCGGCCACGAGGTGGT
GGTCCTGGAGCGCCAGGACGGCGCCGCGCTGGAGACGAGCTTCGCCAACGCGGGCGAGATCTCGCCCGGCTACGCCTCGC
CCTGGGCCTCCCCCGGCGTGCCGCGCAAGGCGCCGAAGTGGCTGCTGGCCCGCCACGCGCCGCTGATCGTCCGGCCCAGC
CTCGATCCCGCCCTGCTGAGCTGGCTGCTCGCGATGCTGCGCAACTGCACGACCGAGCGCTACCTCGCCAACAAGGCGCG
GATGGTGCGCCTGGCCGAGCACAGCCGCGACTGCCTGATCGCCCTGCGCCGGGAGACGGGCATCCAGTACGACCAGCGCA
GCCGGGGCACGCTGCAGGTCTTCCGCACCCAGGCGCAGATGGACGAGGCCGGCAAGGACATGGAGGTCCTGCGGGATCTC
GGCGTGCCCTATGAGCTGCTGGACCGCCTGGGATGCATCGCCCGCGAGCCGGGCCTGGGCCACGCCCGCGACACGATCGT
GGGCGGCCTTCGGCTGCCGAACGACGAGACCGGCGACTGCTTCAAGTTCACCACCGCCCTGGCGGACCTGTGCCGCGGGC
AGGGGGTCGACTTCCGCTTCGGGACGACTATTCAGGGCCTGGAGACGGCCGGCGGCGAGGTCGGGGGCGTGCGCACCCCC
GGCGGCACCGTCACGGGCGACGCCTACGTCGTCTGCCTCGGCAGCTACTCCGAGCCCTTCCTGCGGCCGCACGGGATCCG
CACCGGCGTCTATCCGGTGAAGGGCTATTCGCTGACGGCGACGATCACCGACGAGGCCAAGGCGCCCGTCTCGACGCTTC
TGGACGAGACCTACAAGGTCGCCATCACGCGGCTGGGCGACCGGGTGCGCATCGGCGGCCTGGCCGAGCTCGCCGGCTAC
GACCTCAGCCTGCGTCCCTCGCGCCGGGCGACGCTGGAGCATTCCGCCGGCAGCCTGTTCGGCGGCAGCTGCGACCTGCC
CTCGGCCACGTTCTGGTGCGGCCTTCGCCCGATGACCCCCACCAGCACGCCGCGCATCGGCGAGGCGCCGCTGCGGCGGC
TGTTCCTCAACACCGGCCACGGGACCCTGGGCTGGACCATGGCCTGCGGCTCGGCCCAGGTGCTGGCCGACGCGGTGGGG
CGCCAGGCGCCGGCGCTGGACCTGACCGACTACGCGGTCCCCGGCTCGCCCGCCGCCGAGCCCCTGCGCCGGGCGGCCTG
A

Upstream 100 bases:

>100_bases
GCACGATCCCCTACGAGATCCTCACGCGCATGGGCCGGCGCCTGCAGCGCCGCTACGTCGGCGGGCCGGGGCCCCTGCGC
CAACAAGGAGCAGCGTCCCG

Downstream 100 bases:

>100_bases
CGCCGCCTCCGGCCGGGGCGCGCGATTGACTTGGCTGCGCCCAGCCGCCAAACCCGCGCCGCGATGCAAGTTCCAGCGCG
CTTCCAAGCACTCCTGCGAC

Product: D-amino-acid dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MKVVVLGAGVIGVTTAWYLAKAGHEVVVLERQDGAALETSFANAGEISPGYASPWASPGVPRKAPKWLLARHAPLIVRPS
LDPALLSWLLAMLRNCTTERYLANKARMVRLAEHSRDCLIALRRETGIQYDQRSRGTLQVFRTQAQMDEAGKDMEVLRDL
GVPYELLDRLGCIAREPGLGHARDTIVGGLRLPNDETGDCFKFTTALADLCRGQGVDFRFGTTIQGLETAGGEVGGVRTP
GGTVTGDAYVVCLGSYSEPFLRPHGIRTGVYPVKGYSLTATITDEAKAPVSTLLDETYKVAITRLGDRVRIGGLAELAGY
DLSLRPSRRATLEHSAGSLFGGSCDLPSATFWCGLRPMTPTSTPRIGEAPLRRLFLNTGHGTLGWTMACGSAQVLADAVG
RQAPALDLTDYAVPGSPAAEPLRRAA

Sequences:

>Translated_426_residues
MKVVVLGAGVIGVTTAWYLAKAGHEVVVLERQDGAALETSFANAGEISPGYASPWASPGVPRKAPKWLLARHAPLIVRPS
LDPALLSWLLAMLRNCTTERYLANKARMVRLAEHSRDCLIALRRETGIQYDQRSRGTLQVFRTQAQMDEAGKDMEVLRDL
GVPYELLDRLGCIAREPGLGHARDTIVGGLRLPNDETGDCFKFTTALADLCRGQGVDFRFGTTIQGLETAGGEVGGVRTP
GGTVTGDAYVVCLGSYSEPFLRPHGIRTGVYPVKGYSLTATITDEAKAPVSTLLDETYKVAITRLGDRVRIGGLAELAGY
DLSLRPSRRATLEHSAGSLFGGSCDLPSATFWCGLRPMTPTSTPRIGEAPLRRLFLNTGHGTLGWTMACGSAQVLADAVG
RQAPALDLTDYAVPGSPAAEPLRRAA
>Mature_426_residues
MKVVVLGAGVIGVTTAWYLAKAGHEVVVLERQDGAALETSFANAGEISPGYASPWASPGVPRKAPKWLLARHAPLIVRPS
LDPALLSWLLAMLRNCTTERYLANKARMVRLAEHSRDCLIALRRETGIQYDQRSRGTLQVFRTQAQMDEAGKDMEVLRDL
GVPYELLDRLGCIAREPGLGHARDTIVGGLRLPNDETGDCFKFTTALADLCRGQGVDFRFGTTIQGLETAGGEVGGVRTP
GGTVTGDAYVVCLGSYSEPFLRPHGIRTGVYPVKGYSLTATITDEAKAPVSTLLDETYKVAITRLGDRVRIGGLAELAGY
DLSLRPSRRATLEHSAGSLFGGSCDLPSATFWCGLRPMTPTSTPRIGEAPLRRLFLNTGHGTLGWTMACGSAQVLADAVG
RQAPALDLTDYAVPGSPAAEPLRRAA

Specific function: Oxidative deamination of D-amino acids

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family

Homologues:

Organism=Escherichia coli, GI1787438, Length=413, Percent_Identity=53.7530266343826, Blast_Score=444, Evalue=1e-126,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DADA_PHEZH (B4RBL4)

Other databases:

- EMBL:   CP000747
- RefSeq:   YP_002128903.1
- GeneID:   6789548
- GenomeReviews:   CP000747_GR
- KEGG:   pzu:PHZ_c0060
- HOGENOM:   HBG729204
- OMA:   LEHAGGQ
- HAMAP:   MF_01202
- InterPro:   IPR023080
- InterPro:   IPR006076

Pfam domain/function: PF01266 DAO

EC number: =1.4.99.1

Molecular weight: Translated: 45587; Mature: 45587

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVVVLGAGVIGVTTAWYLAKAGHEVVVLERQDGAALETSFANAGEISPGYASPWASPGV
CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCC
PRKAPKWLLARHAPLIVRPSLDPALLSWLLAMLRNCTTERYLANKARMVRLAEHSRDCLI
CCCCCHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEE
ALRRETGIQYDQRSRGTLQVFRTQAQMDEAGKDMEVLRDLGVPYELLDRLGCIAREPGLG
EEHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCC
HARDTIVGGLRLPNDETGDCFKFTTALADLCRGQGVDFRFGTTIQGLETAGGEVGGVRTP
CCHHHHCCCEECCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCHHHCCCCCCCEECC
GGTVTGDAYVVCLGSYSEPFLRPHGIRTGVYPVKGYSLTATITDEAKAPVSTLLDETYKV
CCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEECCEEEEEEECCCCCCHHHHHHHHHHHH
AITRLGDRVRIGGLAELAGYDLSLRPSRRATLEHSAGSLFGGSCDLPSATFWCGLRPMTP
HHHHCCCEEEECCHHHHHCCCEEECCCCCCHHCCCCCCCCCCCCCCCCCCEEECCCCCCC
TSTPRIGEAPLRRLFLNTGHGTLGWTMACGSAQVLADAVGRQAPALDLTDYAVPGSPAAE
CCCCCCCHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHH
PLRRAA
HHHHCC
>Mature Secondary Structure
MKVVVLGAGVIGVTTAWYLAKAGHEVVVLERQDGAALETSFANAGEISPGYASPWASPGV
CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCC
PRKAPKWLLARHAPLIVRPSLDPALLSWLLAMLRNCTTERYLANKARMVRLAEHSRDCLI
CCCCCHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEE
ALRRETGIQYDQRSRGTLQVFRTQAQMDEAGKDMEVLRDLGVPYELLDRLGCIAREPGLG
EEHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCC
HARDTIVGGLRLPNDETGDCFKFTTALADLCRGQGVDFRFGTTIQGLETAGGEVGGVRTP
CCHHHHCCCEECCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCHHHCCCCCCCEECC
GGTVTGDAYVVCLGSYSEPFLRPHGIRTGVYPVKGYSLTATITDEAKAPVSTLLDETYKV
CCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEECCEEEEEEECCCCCCHHHHHHHHHHHH
AITRLGDRVRIGGLAELAGYDLSLRPSRRATLEHSAGSLFGGSCDLPSATFWCGLRPMTP
HHHHCCCEEEECCHHHHHCCCEEECCCCCCHHCCCCCCCCCCCCCCCCCCEEECCCCCCC
TSTPRIGEAPLRRLFLNTGHGTLGWTMACGSAQVLADAVGRQAPALDLTDYAVPGSPAAE
CCCCCCCHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHH
PLRRAA
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA