Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is qheDH [H]

Identifier: 197103523

GI number: 197103523

Start: 48745

End: 50673

Strand: Reverse

Name: qheDH [H]

Synonym: PHZ_c0057

Alternate gene names: 197103523

Gene position: 50673-48745 (Counterclockwise)

Preceding gene: 197103526

Following gene: 197103518

Centisome position: 1.27

GC content: 71.85

Gene sequence:

>1929_bases
ATGGGCGTCTGGAAGCGGATGGCGCAGGGCGGCGGCGTGGCGGCGTTGGCCGCGGCGGCCCTTGGCGCGGGTCTCGGGTT
CGGCCAGCTGGCGAACGCCCAGGCGCCGGACGATGCGCCGACGCCCGGCAAGCTCGTCTACGACCAGTACTGCGCGTCCT
GCCACGACAAGCCCGAGCCGGGCAGCCGGGCGGCGCCGATCGGCAACCTGCGAAAGATGAGCGCCCAGACGCTGACCACG
GTGCTGACCACCGGGGTGATGAAGCCGATGGGCGACCAGCTCAGCCGCCGCCAGATGCGCGAGCTGGTCGAGTACCTGGC
CGCGCCGGCGGGCCCGCTGGGGACCGAATGGATCGAGACGGCGATGTGCGCGCGCGGGCAGCGCGAGGTGGACGTGTCGG
GCAAGCCCGCCCAGCTCGGCTTCGGCGTCGACCTCGACAACTCCCGCCGGATGAGCGCCGCCCAGGCCGGCCTGAAGACG
AAGGACGTCGCCGACCTGGAGGTCGCCTGGACCTTCGCCTTCCCGCGCACCAGCAGCCTGCGCAGCCAGGGCGTGGTCGT
GGGCTCGACGCTGTTCTATCCGGCCGGCCAGACGAACTACCTGGTGGCGCTGGACACCAAGTCCGGCTGCGTGAAATGGG
CCAGCGAGCTGCCCTCGCCGATCCGCAACAGCCTGGCCGTCGGCCGGCTGGGCCCCAAGGGCCCGCTGGCGGTGGTCGGC
GGCGACAACGCCGGCAATCTCGTGGCCGTCGACGCCAAGACCGGCAAGGTCGCCTGGCGCGTCGATCCGCGGCACGACAA
GAACGTCCCGCTGAGCGGCTCGCCGCTGTTCCACGAGGACAAGATCATCGTCCCGGTCTCGGCCATGGACGTGGCCAACG
CCATGCGGCCCAACTTCGAGTGCTGCAAGAGCCACGGCGCGGTCGTGGCGGTCGAGGCCGCCAGCGGACGGACCCTGTGG
ACCTGGCACACCATGGAGGACGCCAAGCCGCTGGGGCGGAAAACCTCCACCGGCGTGGAGACCTACGGTCCGTCGGGCGC
CCCGATCTGGTCGAGCCCGGCGATCGATCCGCGCAAGGGGATCGTCTACACCGCCACGGGCGAGAACACCTCGCCGCCGG
CCACCAAGACGAGCGACGCTGTGGTGGCCATCGACCTTTCCACAGGCAAGGACCGGTGGGTGTTCCAGGCCCTGGAGAAC
GACGTCTGGAACATGTCGTGCCCCATCGGGCCGCCGCCGCCCGGCCAGCCGCTGAAGCCCAACTGCTACTTCGCCAATGA
GGGCAGCGTGCTGCGCGACCACGACTTCGGCGGCGGTCCGGTGATCTTTCGCGGGAAAGGCGGGCGCGAGCTGATCCTGG
CGGGCCAGAAGTCGGGCGACGTCTGGGCGCTGGAGCCGCGCGGCGGCAAGGTCGTCTGGCGCCACACCTTCGGCCCCGGC
ACCCCGCTGGGCGGCGTCCACTGGGGCCTGGCCACCGACGGCGTGCGCGTCTTCGCCCCGATCAGCGACCCGAACGTGCC
GGCCGACAAGTCCGCCGCCGGGATGCACGCCATCGACGTGGCGAGCGGCAAGATCGCCTGGCAGTGGAAGGCCGCCCCCG
ACTGCGAAGGCGATCGGAAGACGCGGGTCCCGATCTGCGCCAGCCGCTACGGCCTGTCGGCGCCGCCGCTGGTCATCGAC
GGCGCGGTGCTGGCGGGATCGCTGGACGGCCGGCTCTGGGTGTTCGACGCCGTTCGGGGCGACGTGCTCGCCAGCTACGA
CACGGCCCGGACGCATCAGTCGGTGAACGGGCTCGCGGGCTCGGGCGGCTCGATCGACGCGGCCGGCCTGTTCGCCGGCG
ACGGCATGGTGTTCGTCAACTCGGGCTATGCGGCCTTCGGCCAGCAGCCGGGCAACGTGCTGGTGGCGTACCGGCCGAAG
GCGAAATAG

Upstream 100 bases:

>100_bases
CGCGCGGGGATTTCAGCCGGGCAATCTGAATATAACGGCGGGCGGCTAGCTTCCGCCCGAGAGCGAGCCGTCGAACGGCC
GGTATGTTTTGGGGGAAACG

Downstream 100 bases:

>100_bases
CAGCGGCGGGGCGGGGGCGTCAGGCCCCCGCTACCTCTAGGCGCCCGTCACCTCGTCCCAGAAGCGCTTGGCCTTGCCGA
TGAAGCTGGCCGACTTCGGA

Product: glucose dehydrogenase

Products: NA

Alternate protein names: QH-EDH1; Quinohaemoprotein ethanol dehydrogenase type I [H]

Number of amino acids: Translated: 642; Mature: 641

Protein sequence:

>642_residues
MGVWKRMAQGGGVAALAAAALGAGLGFGQLANAQAPDDAPTPGKLVYDQYCASCHDKPEPGSRAAPIGNLRKMSAQTLTT
VLTTGVMKPMGDQLSRRQMRELVEYLAAPAGPLGTEWIETAMCARGQREVDVSGKPAQLGFGVDLDNSRRMSAAQAGLKT
KDVADLEVAWTFAFPRTSSLRSQGVVVGSTLFYPAGQTNYLVALDTKSGCVKWASELPSPIRNSLAVGRLGPKGPLAVVG
GDNAGNLVAVDAKTGKVAWRVDPRHDKNVPLSGSPLFHEDKIIVPVSAMDVANAMRPNFECCKSHGAVVAVEAASGRTLW
TWHTMEDAKPLGRKTSTGVETYGPSGAPIWSSPAIDPRKGIVYTATGENTSPPATKTSDAVVAIDLSTGKDRWVFQALEN
DVWNMSCPIGPPPPGQPLKPNCYFANEGSVLRDHDFGGGPVIFRGKGGRELILAGQKSGDVWALEPRGGKVVWRHTFGPG
TPLGGVHWGLATDGVRVFAPISDPNVPADKSAAGMHAIDVASGKIAWQWKAAPDCEGDRKTRVPICASRYGLSAPPLVID
GAVLAGSLDGRLWVFDAVRGDVLASYDTARTHQSVNGLAGSGGSIDAAGLFAGDGMVFVNSGYAAFGQQPGNVLVAYRPK
AK

Sequences:

>Translated_642_residues
MGVWKRMAQGGGVAALAAAALGAGLGFGQLANAQAPDDAPTPGKLVYDQYCASCHDKPEPGSRAAPIGNLRKMSAQTLTT
VLTTGVMKPMGDQLSRRQMRELVEYLAAPAGPLGTEWIETAMCARGQREVDVSGKPAQLGFGVDLDNSRRMSAAQAGLKT
KDVADLEVAWTFAFPRTSSLRSQGVVVGSTLFYPAGQTNYLVALDTKSGCVKWASELPSPIRNSLAVGRLGPKGPLAVVG
GDNAGNLVAVDAKTGKVAWRVDPRHDKNVPLSGSPLFHEDKIIVPVSAMDVANAMRPNFECCKSHGAVVAVEAASGRTLW
TWHTMEDAKPLGRKTSTGVETYGPSGAPIWSSPAIDPRKGIVYTATGENTSPPATKTSDAVVAIDLSTGKDRWVFQALEN
DVWNMSCPIGPPPPGQPLKPNCYFANEGSVLRDHDFGGGPVIFRGKGGRELILAGQKSGDVWALEPRGGKVVWRHTFGPG
TPLGGVHWGLATDGVRVFAPISDPNVPADKSAAGMHAIDVASGKIAWQWKAAPDCEGDRKTRVPICASRYGLSAPPLVID
GAVLAGSLDGRLWVFDAVRGDVLASYDTARTHQSVNGLAGSGGSIDAAGLFAGDGMVFVNSGYAAFGQQPGNVLVAYRPK
AK
>Mature_641_residues
GVWKRMAQGGGVAALAAAALGAGLGFGQLANAQAPDDAPTPGKLVYDQYCASCHDKPEPGSRAAPIGNLRKMSAQTLTTV
LTTGVMKPMGDQLSRRQMRELVEYLAAPAGPLGTEWIETAMCARGQREVDVSGKPAQLGFGVDLDNSRRMSAAQAGLKTK
DVADLEVAWTFAFPRTSSLRSQGVVVGSTLFYPAGQTNYLVALDTKSGCVKWASELPSPIRNSLAVGRLGPKGPLAVVGG
DNAGNLVAVDAKTGKVAWRVDPRHDKNVPLSGSPLFHEDKIIVPVSAMDVANAMRPNFECCKSHGAVVAVEAASGRTLWT
WHTMEDAKPLGRKTSTGVETYGPSGAPIWSSPAIDPRKGIVYTATGENTSPPATKTSDAVVAIDLSTGKDRWVFQALEND
VWNMSCPIGPPPPGQPLKPNCYFANEGSVLRDHDFGGGPVIFRGKGGRELILAGQKSGDVWALEPRGGKVVWRHTFGPGT
PLGGVHWGLATDGVRVFAPISDPNVPADKSAAGMHAIDVASGKIAWQWKAAPDCEGDRKTRVPICASRYGLSAPPLVIDG
AVLAGSLDGRLWVFDAVRGDVLASYDTARTHQSVNGLAGSGGSIDAAGLFAGDGMVFVNSGYAAFGQQPGNVLVAYRPKA
K

Specific function: Catalyzes the dye-linked oxidation of primary alcohols to the corresponding aldehydes and the (subsequent) oxidation of the aldehydes to carboxylic acids [H]

COG id: COG4993

COG function: function code G; Glucose dehydrogenase

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR019556
- InterPro:   IPR019551
- InterPro:   IPR018391
- InterPro:   IPR017512
- InterPro:   IPR002372
- InterPro:   IPR011047
- InterPro:   IPR001479 [H]

Pfam domain/function: PF01011 PQQ; PF10535 PQQ_C; PF10527 PQQ_N [H]

EC number: =1.1.98.1 [H]

Molecular weight: Translated: 67236; Mature: 67105

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVWKRMAQGGGVAALAAAALGAGLGFGQLANAQAPDDAPTPGKLVYDQYCASCHDKPEP
CCHHHHHHCCCCHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC
GSRAAPIGNLRKMSAQTLTTVLTTGVMKPMGDQLSRRQMRELVEYLAAPAGPLGTEWIET
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
AMCARGQREVDVSGKPAQLGFGVDLDNSRRMSAAQAGLKTKDVADLEVAWTFAFPRTSSL
HHHHCCCCEECCCCCCCEEEEEECCCCCCCHHHHHCCCCCCCCCCEEEEEEEECCCCCCH
RSQGVVVGSTLFYPAGQTNYLVALDTKSGCVKWASELPSPIRNSLAVGRLGPKGPLAVVG
HHCCEEEEEEEEECCCCCCEEEEEECCCCHHHHHHHCCHHHHHCEEECCCCCCCCEEEEE
GDNAGNLVAVDAKTGKVAWRVDPRHDKNVPLSGSPLFHEDKIIVPVSAMDVANAMRPNFE
CCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCEECCEEEEEECHHHHHHHHCCCHH
CCKSHGAVVAVEAASGRTLWTWHTMEDAKPLGRKTSTGVETYGPSGAPIWSSPAIDPRKG
HHHCCCCEEEEEECCCCEEEEEECHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
IVYTATGENTSPPATKTSDAVVAIDLSTGKDRWVFQALENDVWNMSCPIGPPPPGQPLKP
EEEEECCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCC
NCYFANEGSVLRDHDFGGGPVIFRGKGGRELILAGQKSGDVWALEPRGGKVVWRHTFGPG
CEEECCCCCEEEECCCCCCCEEEECCCCCEEEEEECCCCCEEEECCCCCEEEEEEECCCC
TPLGGVHWGLATDGVRVFAPISDPNVPADKSAAGMHAIDVASGKIAWQWKAAPDCEGDRK
CCCCCEEECEECCCEEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCC
TRVPICASRYGLSAPPLVIDGAVLAGSLDGRLWVFDAVRGDVLASYDTARTHQSVNGLAG
CCCCEEHHCCCCCCCCEEEECEEEEECCCCCEEEEECCCCCEEECCCHHHHHHHHCCCCC
SGGSIDAAGLFAGDGMVFVNSGYAAFGQQPGNVLVAYRPKAK
CCCCEEECEEEECCCEEEEECCCCCCCCCCCCEEEEECCCCC
>Mature Secondary Structure 
GVWKRMAQGGGVAALAAAALGAGLGFGQLANAQAPDDAPTPGKLVYDQYCASCHDKPEP
CHHHHHHCCCCHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC
GSRAAPIGNLRKMSAQTLTTVLTTGVMKPMGDQLSRRQMRELVEYLAAPAGPLGTEWIET
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
AMCARGQREVDVSGKPAQLGFGVDLDNSRRMSAAQAGLKTKDVADLEVAWTFAFPRTSSL
HHHHCCCCEECCCCCCCEEEEEECCCCCCCHHHHHCCCCCCCCCCEEEEEEEECCCCCCH
RSQGVVVGSTLFYPAGQTNYLVALDTKSGCVKWASELPSPIRNSLAVGRLGPKGPLAVVG
HHCCEEEEEEEEECCCCCCEEEEEECCCCHHHHHHHCCHHHHHCEEECCCCCCCCEEEEE
GDNAGNLVAVDAKTGKVAWRVDPRHDKNVPLSGSPLFHEDKIIVPVSAMDVANAMRPNFE
CCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCEECCEEEEEECHHHHHHHHCCCHH
CCKSHGAVVAVEAASGRTLWTWHTMEDAKPLGRKTSTGVETYGPSGAPIWSSPAIDPRKG
HHHCCCCEEEEEECCCCEEEEEECHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
IVYTATGENTSPPATKTSDAVVAIDLSTGKDRWVFQALENDVWNMSCPIGPPPPGQPLKP
EEEEECCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCC
NCYFANEGSVLRDHDFGGGPVIFRGKGGRELILAGQKSGDVWALEPRGGKVVWRHTFGPG
CEEECCCCCEEEECCCCCCCEEEECCCCCEEEEEECCCCCEEEECCCCCEEEEEEECCCC
TPLGGVHWGLATDGVRVFAPISDPNVPADKSAAGMHAIDVASGKIAWQWKAAPDCEGDRK
CCCCCEEECEECCCEEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCC
TRVPICASRYGLSAPPLVIDGAVLAGSLDGRLWVFDAVRGDVLASYDTARTHQSVNGLAG
CCCCEEHHCCCCCCCCEEEECEEEEECCCCCEEEEECCCCCEEECCCHHHHHHHHCCCCC
SGGSIDAAGLFAGDGMVFVNSGYAAFGQQPGNVLVAYRPKAK
CCCCEEECEEEECCCEEEEECCCCCCCCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8654419; 7601151; 3521592; 11679760; 11714714 [H]