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The map label for this gene is yfgC [H]

Identifier: 197103502

GI number: 197103502

Start: 30967

End: 31746

Strand: Direct

Name: yfgC [H]

Synonym: PHZ_c0036

Alternate gene names: 197103502

Gene position: 30967-31746 (Clockwise)

Preceding gene: 197103501

Following gene: 197103504

Centisome position: 0.77

GC content: 75.13

Gene sequence:

>780_bases
ATGTGCGGGATCTGCCTGTCGCGGCGCGGAGTGCTGGCGGGCCTGGGGGCCCTGCCGCTCGGCGCCGCGTCCCTGGCGGC
CTGCAGCGAGAACGCCGCCACGGGCCGGCGGCAGCTCGTCCTGGTGGACGACGGCCAGCTCGCCGGCCTCGCCGACCAGG
CGTGGGACGAGATCGCCGCCAAGATCCCGCCGGTGCGCGATCCGGCGGCGCACGCGCGGCTGGCGCGGATCGGCGACCCC
CTGGTGAAGGCGTCGGGGCTGACGGGCCTGCCGTGGTCGTTCACCGTGCTGGACAGCCCGGAGTTCAACGCCTTCGTCCT
GCCGAACGGCCGCGTGGGCTTCTTCCGCGGCCTGCTCGAGTTCGCCCGCTCGGACGACGAGGTGGGTTCGGTGCTGGGCC
ATGAGGTCGGCCACCTGGTCGCCCGCCACCCCGCCGAGCGGGTCAGCCAGGAGCTGGCCGTGCAGGCCGGCGTCTCCGTC
GCCCAGATGCTGATCGCCGAGAACGCCGGCCAGTGGACCGACGAGATCGGCGCGGCGCTCGGCATGGGGGCGGTGTTCGG
GGTCATCCTGCCCTACTCCCGTCGTCACGAGCTGGAGGCCGACCGGGTGGGCGTCGACCTGATGCGCAAGGCCGGCATGG
ACCCCGCCGCCGCCGTCCGCTTCTGGGAGCGCATGGCGGGCCGGGCTGACGCGGCCGCGCAGGCGCCGGAAGTGATCTCG
ACGCATCCCGCCGACGCCCGCCGGCTGGAGGAACTGCGGGCCGCCGTGGGTGAGGCCTAG

Upstream 100 bases:

>100_bases
CCGCGACGGCGAGACGATCACGGTGGACGCGGCCTATGTGAACGGCCGGATCGGCGACCTGGCCGGCAACGCCGACCTGT
CGAAGTTCATCCTCTAGGCG

Downstream 100 bases:

>100_bases
GCGCCGCGCTTGGCGCGCCAGATCGCGTCTTCGAGGGCGCGGGCGAACTCGGCCCGCTCGCCGGGGCTGAGGGCGGCGGC
CACCGGCGTCTCGCGGCCCG

Product: Zn-dependent protease with chaperone function

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MCGICLSRRGVLAGLGALPLGAASLAACSENAATGRRQLVLVDDGQLAGLADQAWDEIAAKIPPVRDPAAHARLARIGDP
LVKASGLTGLPWSFTVLDSPEFNAFVLPNGRVGFFRGLLEFARSDDEVGSVLGHEVGHLVARHPAERVSQELAVQAGVSV
AQMLIAENAGQWTDEIGAALGMGAVFGVILPYSRRHELEADRVGVDLMRKAGMDPAAAVRFWERMAGRADAAAQAPEVIS
THPADARRLEELRAAVGEA

Sequences:

>Translated_259_residues
MCGICLSRRGVLAGLGALPLGAASLAACSENAATGRRQLVLVDDGQLAGLADQAWDEIAAKIPPVRDPAAHARLARIGDP
LVKASGLTGLPWSFTVLDSPEFNAFVLPNGRVGFFRGLLEFARSDDEVGSVLGHEVGHLVARHPAERVSQELAVQAGVSV
AQMLIAENAGQWTDEIGAALGMGAVFGVILPYSRRHELEADRVGVDLMRKAGMDPAAAVRFWERMAGRADAAAQAPEVIS
THPADARRLEELRAAVGEA
>Mature_259_residues
MCGICLSRRGVLAGLGALPLGAASLAACSENAATGRRQLVLVDDGQLAGLADQAWDEIAAKIPPVRDPAAHARLARIGDP
LVKASGLTGLPWSFTVLDSPEFNAFVLPNGRVGFFRGLLEFARSDDEVGSVLGHEVGHLVARHPAERVSQELAVQAGVSV
AQMLIAENAGQWTDEIGAALGMGAVFGVILPYSRRHELEADRVGVDLMRKAGMDPAAAVRFWERMAGRADAAAQAPEVIS
THPADARRLEELRAAVGEA

Specific function: Unknown

COG id: COG0501

COG function: function code O; Zn-dependent protease with chaperone function

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=224, Percent_Identity=25, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI87082185, Length=218, Percent_Identity=29.3577981651376, Blast_Score=88, Evalue=5e-19,
Organism=Escherichia coli, GI87081800, Length=181, Percent_Identity=28.7292817679558, Blast_Score=73, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6322940, Length=197, Percent_Identity=32.48730964467, Blast_Score=97, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 27223; Mature: 27223

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGICLSRRGVLAGLGALPLGAASLAACSENAATGRRQLVLVDDGQLAGLADQAWDEIAA
CCCCCCCCCCHHHHCCCCCCCHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHH
KIPPVRDPAAHARLARIGDPLVKASGLTGLPWSFTVLDSPEFNAFVLPNGRVGFFRGLLE
HCCCCCCHHHHHHHHHHCCHHHHCCCCCCCCEEEEEECCCCCCEEECCCCCHHHHHHHHH
FARSDDEVGSVLGHEVGHLVARHPAERVSQELAVQAGVSVAQMLIAENAGQWTDEIGAAL
HHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
GMGAVFGVILPYSRRHELEADRVGVDLMRKAGMDPAAAVRFWERMAGRADAAAQAPEVIS
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHCCCHHHH
THPADARRLEELRAAVGEA
CCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MCGICLSRRGVLAGLGALPLGAASLAACSENAATGRRQLVLVDDGQLAGLADQAWDEIAA
CCCCCCCCCCHHHHCCCCCCCHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHH
KIPPVRDPAAHARLARIGDPLVKASGLTGLPWSFTVLDSPEFNAFVLPNGRVGFFRGLLE
HCCCCCCHHHHHHHHHHCCHHHHCCCCCCCCEEEEEECCCCCCEEECCCCCHHHHHHHHH
FARSDDEVGSVLGHEVGHLVARHPAERVSQELAVQAGVSVAQMLIAENAGQWTDEIGAAL
HHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
GMGAVFGVILPYSRRHELEADRVGVDLMRKAGMDPAAAVRFWERMAGRADAAAQAPEVIS
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHCCCHHHH
THPADARRLEELRAAVGEA
CCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]