| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
Click here to switch to the map view.
The map label for this gene is 197103481
Identifier: 197103481
GI number: 197103481
Start: 11810
End: 13069
Strand: Reverse
Name: 197103481
Synonym: PHZ_c0015
Alternate gene names: NA
Gene position: 13069-11810 (Counterclockwise)
Preceding gene: 197103482
Following gene: 197103472
Centisome position: 0.33
GC content: 73.89
Gene sequence:
>1260_bases ATGGACCTGGACCTGCCCGCGAACGCGCTGGCCGAGGCGCTGCGCGTCGCGCGCACCGCCGAGCAGCTCGATGTGGCCAT CGACCACGTGGCGCGGGTCGCCGGCCGCTTCCGGGAGCCCGAGCTCTACGGCCGGATGCTCTACGCCTCCGAAGTCGATG CTACGGTCCCGGTGCTGGCGCAGCGGCTGAAGCTGAAGGACCTGCCCGGCGAGCTTTCCAACACGCGCGCCGTCGTGCTC GTCAGCCGCCTCTACGCTTCCGGCGGCCACAGCCGGGTGGCGGCCGACATCGTTCGGCGCCTTCCGCCGGCCTCGGCCAC GCTGGTGATGACCGACCCCAAGCGCCAGTTCCGCCACCGGCAGATGCTGAACGGCGTGCCGGGCTTCGACCTGCGCGCCG CGGTGCTGCTGGCCTCGGCCACCCCCGCCGAGCGGATCGTTGAGCTCTACAACATCCTGGCGGCGATCCGGCCGACCCGC ATCTTCCTGCTGAACCACCACATGGACCTGACGGCGGTGGCCGCCGCCTGGCCCTTCCGCGACGTGGTCGAGTTCATCCA TCACGCCGACCATCTGCCCTGCCTGGGCGCGACCCTGCCGTTCGCCGCCCACGTCGACCTCACCTGGACCTGCCACTTGG CCTGCCGCGACGCGGGGCTGCGGCCGCTCTACGCGGGGCTCGCGGCGCCTGCCCTGGCCCCGGGCGAGGTCGCGGCGAGG CCGGGGCTTCGGGTCGCGACGTCCGGCGTCCAGCACAAGTTCGAGGGCCGGCGGGCGCACGCCTGGGCCGACTTCGCCGC CGCGGTCCTACGGCGGCCGGGCGCCGAGATGATCCACATCGGCGCCACGAGCCCCGAGTTCGAGCAGGGTCTGCGGCAGG CCCTTGCGGGCGCCGGCGCCGATCCGGCCCGCTACCGCTTCGTCGGACAGGTGGAAAGCGTGCACGCGGCCCTGCTGGAG CACGGCGCCGACGTCTACCTCTCCAGCTTCCCCGAGACCGGCGGCAAGGCGAACCTCGAGGCCATGGCCGCCCGCATCCC GGTGATCCTGCCGATGGCGGCCGGGACGCCGCCCCTGCTGCGCTACGACCTGCCGCTCCGCCGCTGGACCGAGGTGGAGC GGCCCGACCAGATCGACGCCGCCCTCGACGCGGCGCTCGCCATGGCCCCCGCCCTGCGCACCCCCGAGGCGGTCGCCGAG CTCGAACGCGAACTCGGCCGTTTCGACGCTTATGTCGCGAACGAGGCGGCCCGGCCCTAG
Upstream 100 bases:
>100_bases CCTGGTACCACGAGCTCTGGCGCCGCCGCGAAGAGCTCGCCGCCGCCCTCTTCGCGCGCGACCCGAAACTCGCCGCCCTC GTGGCCGAGGCGGCGTAGCC
Downstream 100 bases:
>100_bases CGGCGCTGCGCCACCACGTAGATCTCGCCGGCGATGTCGGGGTAGCGCTCGCCCAGCACCATGAACGCCTGCAGCATCTC GGGCGTCCAGTCGCGCTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 419; Mature: 419
Protein sequence:
>419_residues MDLDLPANALAEALRVARTAEQLDVAIDHVARVAGRFREPELYGRMLYASEVDATVPVLAQRLKLKDLPGELSNTRAVVL VSRLYASGGHSRVAADIVRRLPPASATLVMTDPKRQFRHRQMLNGVPGFDLRAAVLLASATPAERIVELYNILAAIRPTR IFLLNHHMDLTAVAAAWPFRDVVEFIHHADHLPCLGATLPFAAHVDLTWTCHLACRDAGLRPLYAGLAAPALAPGEVAAR PGLRVATSGVQHKFEGRRAHAWADFAAAVLRRPGAEMIHIGATSPEFEQGLRQALAGAGADPARYRFVGQVESVHAALLE HGADVYLSSFPETGGKANLEAMAARIPVILPMAAGTPPLLRYDLPLRRWTEVERPDQIDAALDAALAMAPALRTPEAVAE LERELGRFDAYVANEAARP
Sequences:
>Translated_419_residues MDLDLPANALAEALRVARTAEQLDVAIDHVARVAGRFREPELYGRMLYASEVDATVPVLAQRLKLKDLPGELSNTRAVVL VSRLYASGGHSRVAADIVRRLPPASATLVMTDPKRQFRHRQMLNGVPGFDLRAAVLLASATPAERIVELYNILAAIRPTR IFLLNHHMDLTAVAAAWPFRDVVEFIHHADHLPCLGATLPFAAHVDLTWTCHLACRDAGLRPLYAGLAAPALAPGEVAAR PGLRVATSGVQHKFEGRRAHAWADFAAAVLRRPGAEMIHIGATSPEFEQGLRQALAGAGADPARYRFVGQVESVHAALLE HGADVYLSSFPETGGKANLEAMAARIPVILPMAAGTPPLLRYDLPLRRWTEVERPDQIDAALDAALAMAPALRTPEAVAE LERELGRFDAYVANEAARP >Mature_419_residues MDLDLPANALAEALRVARTAEQLDVAIDHVARVAGRFREPELYGRMLYASEVDATVPVLAQRLKLKDLPGELSNTRAVVL VSRLYASGGHSRVAADIVRRLPPASATLVMTDPKRQFRHRQMLNGVPGFDLRAAVLLASATPAERIVELYNILAAIRPTR IFLLNHHMDLTAVAAAWPFRDVVEFIHHADHLPCLGATLPFAAHVDLTWTCHLACRDAGLRPLYAGLAAPALAPGEVAAR PGLRVATSGVQHKFEGRRAHAWADFAAAVLRRPGAEMIHIGATSPEFEQGLRQALAGAGADPARYRFVGQVESVHAALLE HGADVYLSSFPETGGKANLEAMAARIPVILPMAAGTPPLLRYDLPLRRWTEVERPDQIDAALDAALAMAPALRTPEAVAE LERELGRFDAYVANEAARP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45355; Mature: 45355
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLDLPANALAEALRVARTAEQLDVAIDHVARVAGRFREPELYGRMLYASEVDATVPVLA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHH QRLKLKDLPGELSNTRAVVLVSRLYASGGHSRVAADIVRRLPPASATLVMTDPKRQFRHR HHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCHHHHHHH QMLNGVPGFDLRAAVLLASATPAERIVELYNILAAIRPTRIFLLNHHMDLTAVAAAWPFR HHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCHH DVVEFIHHADHLPCLGATLPFAAHVDLTWTCHLACRDAGLRPLYAGLAAPALAPGEVAAR HHHHHHHCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCHHHHHHHCCCCCCCCHHCC PGLRVATSGVQHKFEGRRAHAWADFAAAVLRRPGAEMIHIGATSPEFEQGLRQALAGAGA CCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCC DPARYRFVGQVESVHAALLEHGADVYLSSFPETGGKANLEAMAARIPVILPMAAGTPPLL CHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHCCEEEEECCCCCCCE RYDLPLRRWTEVERPDQIDAALDAALAMAPALRTPEAVAELERELGRFDAYVANEAARP EECCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MDLDLPANALAEALRVARTAEQLDVAIDHVARVAGRFREPELYGRMLYASEVDATVPVLA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHH QRLKLKDLPGELSNTRAVVLVSRLYASGGHSRVAADIVRRLPPASATLVMTDPKRQFRHR HHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCHHHHHHH QMLNGVPGFDLRAAVLLASATPAERIVELYNILAAIRPTRIFLLNHHMDLTAVAAAWPFR HHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCHH DVVEFIHHADHLPCLGATLPFAAHVDLTWTCHLACRDAGLRPLYAGLAAPALAPGEVAAR HHHHHHHCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCHHHHHHHCCCCCCCCHHCC PGLRVATSGVQHKFEGRRAHAWADFAAAVLRRPGAEMIHIGATSPEFEQGLRQALAGAGA CCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCC DPARYRFVGQVESVHAALLEHGADVYLSSFPETGGKANLEAMAARIPVILPMAAGTPPLL CHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHCCEEEEECCCCCCCE RYDLPLRRWTEVERPDQIDAALDAALAMAPALRTPEAVAELERELGRFDAYVANEAARP EECCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA