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The map label for this gene is parB [H]

Identifier: 195979049

GI number: 195979049

Start: 2023397

End: 2024170

Strand: Direct

Name: parB [H]

Synonym: Sez_1961

Alternate gene names: 195979049

Gene position: 2023397-2024170 (Clockwise)

Preceding gene: 195979048

Following gene: NA

Centisome position: 99.96

GC content: 40.05

Gene sequence:

>774_bases
ATGACAGAAATCCTAATGCACATTCCTATCGAGGATATTGTGGCAAATCCTTATCAACCACGTCTTCAATTTAATCAAAA
AGAGCTTGAGGAGCTGGCACATTCCATTCAGGCTAATGGTTTGATTCAACCAATCATTGTCAGAAAATCTGATGTATTTG
GCTATGAATTAGTCGCTGGAGAACGACGCTTTAAAGCAGCCAAGCTGGCAGGACTTCAAAAGATTCCAGCAATTGTTAAG
GAAATCTCTACTCTTGAGAGCATGCAGCAGGCCATCGTAGAAAACCTACAGCGCTCAAATTTAAATGCTATTGAAGAGGC
TAAGGCCTATCAATTACTCATTGATAAAAATAAGATGACCCATGAGGACATCGCGACATACATGGGAAAATCACGCCCTT
ATATCAGCAACACCATCAGGCTGCTGCAACTACCAGACGTTATTAAACAAGCGATTGAGGACAGTACCATTAGTGCTGGA
CATGCAAGAGCCTTATTATCCTTGTCAACACCAAAAGAGCAGGAGCTTTATTTTCACAACATTCTGGATCAAGGCTTAAG
CGTTAGGCAAATCGAACAGCTGGTAAAAGCTAAGCATCACCCCCAAAAAAGAAGCAAACATAAAACCATTTTTGTGAAGT
CTTTAGAAAAAGAGCTCTCAAAATCATTAGGATTACCTGTGGCATTGTCTCTCAAAAAAAATGACAGTGGGCAGCTGCAG
CTATCATTTTCAAACCAAGAAGAATTGAACAGAATTATCAACAAGCTAAAGTAG

Upstream 100 bases:

>100_bases
GATTGAGTCCGAGACGATAGTCGCGGGCTCTTGCTCTTTTATCCCATATGTATCTCTAATAACCGTTAAGCTACCACTAT
TTCCCTTTTGAGAGGCTTAT

Downstream 100 bases:

>100_bases
CTTGTTGATTGTCTGTTTTTTTTATTTAGTTTTCCACAAGAGAAATGTGACTAAAACCTTTTAGCCACAAGGGTTTCTCC
TTTTTCCACAAGTTGTGGAA

Product: chromosome (plasmid) partitioning protein ParB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MTEILMHIPIEDIVANPYQPRLQFNQKELEELAHSIQANGLIQPIIVRKSDVFGYELVAGERRFKAAKLAGLQKIPAIVK
EISTLESMQQAIVENLQRSNLNAIEEAKAYQLLIDKNKMTHEDIATYMGKSRPYISNTIRLLQLPDVIKQAIEDSTISAG
HARALLSLSTPKEQELYFHNILDQGLSVRQIEQLVKAKHHPQKRSKHKTIFVKSLEKELSKSLGLPVALSLKKNDSGQLQ
LSFSNQEELNRIINKLK

Sequences:

>Translated_257_residues
MTEILMHIPIEDIVANPYQPRLQFNQKELEELAHSIQANGLIQPIIVRKSDVFGYELVAGERRFKAAKLAGLQKIPAIVK
EISTLESMQQAIVENLQRSNLNAIEEAKAYQLLIDKNKMTHEDIATYMGKSRPYISNTIRLLQLPDVIKQAIEDSTISAG
HARALLSLSTPKEQELYFHNILDQGLSVRQIEQLVKAKHHPQKRSKHKTIFVKSLEKELSKSLGLPVALSLKKNDSGQLQ
LSFSNQEELNRIINKLK
>Mature_256_residues
TEILMHIPIEDIVANPYQPRLQFNQKELEELAHSIQANGLIQPIIVRKSDVFGYELVAGERRFKAAKLAGLQKIPAIVKE
ISTLESMQQAIVENLQRSNLNAIEEAKAYQLLIDKNKMTHEDIATYMGKSRPYISNTIRLLQLPDVIKQAIEDSTISAGH
ARALLSLSTPKEQELYFHNILDQGLSVRQIEQLVKAKHHPQKRSKHKTIFVKSLEKELSKSLGLPVALSLKKNDSGQLQL
SFSNQEELNRIINKLK

Specific function: Required for the initiation of sporulation and for normal chromosome segregation. Antagonizes sporulation inhibition of soj. It probably interacts with a specific DNA site and other proteins involved in partitioning and cell division, and antagonizes soj

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 29145; Mature: 29014

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEILMHIPIEDIVANPYQPRLQFNQKELEELAHSIQANGLIQPIIVRKSDVFGYELVAG
CCCEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHC
ERRFKAAKLAGLQKIPAIVKEISTLESMQQAIVENLQRSNLNAIEEAKAYQLLIDKNKMT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEECCCCCC
HEDIATYMGKSRPYISNTIRLLQLPDVIKQAIEDSTISAGHARALLSLSTPKEQELYFHN
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHEECCCCCHHHHHHHH
ILDQGLSVRQIEQLVKAKHHPQKRSKHKTIFVKSLEKELSKSLGLPVALSLKKNDSGQLQ
HHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEE
LSFSNQEELNRIINKLK
EEECCHHHHHHHHHHCC
>Mature Secondary Structure 
TEILMHIPIEDIVANPYQPRLQFNQKELEELAHSIQANGLIQPIIVRKSDVFGYELVAG
CCEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHC
ERRFKAAKLAGLQKIPAIVKEISTLESMQQAIVENLQRSNLNAIEEAKAYQLLIDKNKMT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEECCCCCC
HEDIATYMGKSRPYISNTIRLLQLPDVIKQAIEDSTISAGHARALLSLSTPKEQELYFHN
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHEECCCCCHHHHHHHH
ILDQGLSVRQIEQLVKAKHHPQKRSKHKTIFVKSLEKELSKSLGLPVALSLKKNDSGQLQ
HHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEE
LSFSNQEELNRIINKLK
EEECCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 1552862; 9384377; 1900505; 8071208 [H]