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The map label for this gene is yfjK [H]

Identifier: 195978642

GI number: 195978642

Start: 1582376

End: 1584436

Strand: Direct

Name: yfjK [H]

Synonym: Sez_1540

Alternate gene names: 195978642

Gene position: 1582376-1584436 (Clockwise)

Preceding gene: 195978641

Following gene: 195978643

Centisome position: 78.17

GC content: 30.08

Gene sequence:

>2061_bases
TTGGATAAACAACTACAAGACTTTAACCTAGGCTTTTTAATAGCAAGAGATATTTCAGAAAGTCAAGATTATCACAAACT
GATTGAAGTTCTTGAAAGATGGGATTCTGTCCATGATACATTAAAACCTGTTTTTGTAGATTTAATCGAGTCATTTGGAT
TTTATCCATACTTAAATGACGAAAAGTTATCTAGTTTGAATTTATCAGCTAAGTACAGGAATGAATTTCATAAATCAAAT
ATTTCGATAGGCGGAGATGAAAAAATACGATTCCACTCCGAACAGAAAAGAATCGAAGAGATTATATCTAAAAAGCAGAA
TATCATTCTTTCAGCTCCGACTAGTTTTGGAAAAAGTTTATTAATTGAAGAATTTATTTCTCGAAAAATTTATAAAAATA
TCATTATTATTCAGCCGACATTAGCTTTAATTGATGAGACGCGAAAAAAATTAAGAAAATATACTGCTTACAATATAGTT
GTAAATACGAAACAGGAGTTGAGTGATAATAATATTTTTATCTTAACGAGCGAAAGAGTGTTAGAACTTTTTCCAAAGAT
TTCTGAAATTAAGATAGACCTTTTCGTGATAGATGAATTTTACAAAATATCGAATTCGAAATCGGATGAACGCGTTAGTC
AGCTAAATATTGCATTCTATAAGATAATGCAGATAAACTCTCCGCAATTATTACTACTCACACCAAATGTAGACGACATA
AGTAGTGACTTTTTGAACAAATACAATATAAAATTTATTTCTACAGAATATAGTCTGGTAAATCAAAACATTACTCATAT
TGAATACTCTGGCAAAGATTCAGATAAGAAAGAGAAACTATTTGAGTTATTAAAATCAATACCAGATCAGACCATAGTTT
ATGTGCGTTCTCCGAAACGAGCAGAGGAACTGTCTCTAGAATATATAACACGTATCACAAAGATAGGGGTGGAGTTGCCT
ATAATTCAATGGATTGATGAGAATATTTCAGAAGAGTGGAACTTGAAAATAATATTAAATCATGGTATAGGAATGCATAA
TGGACAATTTCCCAGACATATTGTTAATTCTCAACTGGATTACTTTAACCAAGGAAAGCTTAACGTTATTTTTGCGACAA
CATCATTAATTGAGGGGGTTAATACTGCAGCTAAGAATATAGTTATATTTGATATGAAAAAATCGAATAAACCGTTGTCT
TATTTTGATTTTAATAATATCAAGGGTCGTGCAGGACGTATGATGCAACATTATTCTGGAAATATTTTTTATTTTGACAC
TCCTCCTTTAAAGACTTTGGAAAAAGTGGATATTCCACTTATTGAACAAAAGGACAATTTACAGAGCGAAGTATTAATTA
ATCTAGAAAGCACGGACGTAAAAGATAATCTTAAAGAGAGATACGATACAATAAAATCGAGTGTTTCGGAAGAACTGTGG
ACTATTTTTAGGGAAAATTATTATGATGTGGAGTCTCAAAAACAACTATATAATTATCTTATTCAAAACCCTAATTTATT
AACTGACTTATCGTGGAATAACCACTCTCCATCTTATGATACTTTATTGCAAACGATGAAAGCTATTTCGCATGGTTTAG
ATAATGTTAGCAATAATAGCTATAAGCATATCGCACTTAAGGCTAATAAAATTTCGAAAGGGAATATTAAAGATGTAATT
GATAGTGAAGTACAGTACCAATTAGATAAAGCCGATAATGAAGACTTACATAAAGTATATAATAAAGCAATTTTTGACAT
ATTTAAGTTTGTCAGAACTGAGGCGAAATTTAAAATTCCTAAGAAAATGTCAGTTTTACAGAGTATAGTAAATTATATTC
TGGAAGATAAAAAAGCTGATTACTCGTCATTTATAGCCAAGCTAGAAAACGAAGGAGTCGGTGGCTCAAAAAGCATTCTA
TTAGATTATGGAGTTCCGTCTACCGCAATCAAAAAAATTCGCACAAATTTAGGTTCGACTGAAATAATTGATTATATAAA
AAATAATTTAGATAGCTTGAATTTTACTAATTATGAAAGAGAGATAGTTGAGAAACTATAA

Upstream 100 bases:

>100_bases
AAAACGACTAAAAATTCATTTACTACTATTTCCAGTTACAAGCAAAAATGAGTTAGTTCGGAAGTTGCATTATAAACTTA
AGAAAGAAAGTGAGGCTTAA

Downstream 100 bases:

>100_bases
AAATACGCCGTAAAATTTGGCGTATTTTTTGTAAATGACAATCTGAAGAATAATATTTTTAGACTGCTAACTATACTTTT
TAGGGGGGCTTAGCTGAAAA

Product: helicase conserved C-terminal domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 686; Mature: 686

Protein sequence:

>686_residues
MDKQLQDFNLGFLIARDISESQDYHKLIEVLERWDSVHDTLKPVFVDLIESFGFYPYLNDEKLSSLNLSAKYRNEFHKSN
ISIGGDEKIRFHSEQKRIEEIISKKQNIILSAPTSFGKSLLIEEFISRKIYKNIIIIQPTLALIDETRKKLRKYTAYNIV
VNTKQELSDNNIFILTSERVLELFPKISEIKIDLFVIDEFYKISNSKSDERVSQLNIAFYKIMQINSPQLLLLTPNVDDI
SSDFLNKYNIKFISTEYSLVNQNITHIEYSGKDSDKKEKLFELLKSIPDQTIVYVRSPKRAEELSLEYITRITKIGVELP
IIQWIDENISEEWNLKIILNHGIGMHNGQFPRHIVNSQLDYFNQGKLNVIFATTSLIEGVNTAAKNIVIFDMKKSNKPLS
YFDFNNIKGRAGRMMQHYSGNIFYFDTPPLKTLEKVDIPLIEQKDNLQSEVLINLESTDVKDNLKERYDTIKSSVSEELW
TIFRENYYDVESQKQLYNYLIQNPNLLTDLSWNNHSPSYDTLLQTMKAISHGLDNVSNNSYKHIALKANKISKGNIKDVI
DSEVQYQLDKADNEDLHKVYNKAIFDIFKFVRTEAKFKIPKKMSVLQSIVNYILEDKKADYSSFIAKLENEGVGGSKSIL
LDYGVPSTAIKKIRTNLGSTEIIDYIKNNLDSLNFTNYEREIVEKL

Sequences:

>Translated_686_residues
MDKQLQDFNLGFLIARDISESQDYHKLIEVLERWDSVHDTLKPVFVDLIESFGFYPYLNDEKLSSLNLSAKYRNEFHKSN
ISIGGDEKIRFHSEQKRIEEIISKKQNIILSAPTSFGKSLLIEEFISRKIYKNIIIIQPTLALIDETRKKLRKYTAYNIV
VNTKQELSDNNIFILTSERVLELFPKISEIKIDLFVIDEFYKISNSKSDERVSQLNIAFYKIMQINSPQLLLLTPNVDDI
SSDFLNKYNIKFISTEYSLVNQNITHIEYSGKDSDKKEKLFELLKSIPDQTIVYVRSPKRAEELSLEYITRITKIGVELP
IIQWIDENISEEWNLKIILNHGIGMHNGQFPRHIVNSQLDYFNQGKLNVIFATTSLIEGVNTAAKNIVIFDMKKSNKPLS
YFDFNNIKGRAGRMMQHYSGNIFYFDTPPLKTLEKVDIPLIEQKDNLQSEVLINLESTDVKDNLKERYDTIKSSVSEELW
TIFRENYYDVESQKQLYNYLIQNPNLLTDLSWNNHSPSYDTLLQTMKAISHGLDNVSNNSYKHIALKANKISKGNIKDVI
DSEVQYQLDKADNEDLHKVYNKAIFDIFKFVRTEAKFKIPKKMSVLQSIVNYILEDKKADYSSFIAKLENEGVGGSKSIL
LDYGVPSTAIKKIRTNLGSTEIIDYIKNNLDSLNFTNYEREIVEKL
>Mature_686_residues
MDKQLQDFNLGFLIARDISESQDYHKLIEVLERWDSVHDTLKPVFVDLIESFGFYPYLNDEKLSSLNLSAKYRNEFHKSN
ISIGGDEKIRFHSEQKRIEEIISKKQNIILSAPTSFGKSLLIEEFISRKIYKNIIIIQPTLALIDETRKKLRKYTAYNIV
VNTKQELSDNNIFILTSERVLELFPKISEIKIDLFVIDEFYKISNSKSDERVSQLNIAFYKIMQINSPQLLLLTPNVDDI
SSDFLNKYNIKFISTEYSLVNQNITHIEYSGKDSDKKEKLFELLKSIPDQTIVYVRSPKRAEELSLEYITRITKIGVELP
IIQWIDENISEEWNLKIILNHGIGMHNGQFPRHIVNSQLDYFNQGKLNVIFATTSLIEGVNTAAKNIVIFDMKKSNKPLS
YFDFNNIKGRAGRMMQHYSGNIFYFDTPPLKTLEKVDIPLIEQKDNLQSEVLINLESTDVKDNLKERYDTIKSSVSEELW
TIFRENYYDVESQKQLYNYLIQNPNLLTDLSWNNHSPSYDTLLQTMKAISHGLDNVSNNSYKHIALKANKISKGNIKDVI
DSEVQYQLDKADNEDLHKVYNKAIFDIFKFVRTEAKFKIPKKMSVLQSIVNYILEDKKADYSSFIAKLENEGVGGSKSIL
LDYGVPSTAIKKIRTNLGSTEIIDYIKNNLDSLNFTNYEREIVEKL

Specific function: Unknown

COG id: COG1204

COG function: function code R; Superfamily II helicase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1788980, Length=640, Percent_Identity=28.75, Blast_Score=241, Evalue=8e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: NA

Molecular weight: Translated: 79608; Mature: 79608

Theoretical pI: Translated: 6.47; Mature: 6.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKQLQDFNLGFLIARDISESQDYHKLIEVLERWDSVHDTLKPVFVDLIESFGFYPYLND
CCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
EKLSSLNLSAKYRNEFHKSNISIGGDEKIRFHSEQKRIEEIISKKQNIILSAPTSFGKSL
CCCCCCCCCHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHCCCCEEEECCHHHHHHH
LIEEFISRKIYKNIIIIQPTLALIDETRKKLRKYTAYNIVVNTKQELSDNNIFILTSERV
HHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHEEEEEECHHHCCCCCEEEEECHHH
LELFPKISEIKIDLFVIDEFYKISNSKSDERVSQLNIAFYKIMQINSPQLLLLTPNVDDI
HHHCCCHHHEEEEEEEEEHHHHHCCCCCHHHHHHHHHHEEEEEECCCCEEEEECCCCCHH
SSDFLNKYNIKFISTEYSLVNQNITHIEYSGKDSDKKEKLFELLKSIPDQTIVYVRSPKR
HHHHHHCCCEEEEEEHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCC
AEELSLEYITRITKIGVELPIIQWIDENISEEWNLKIILNHGIGMHNGQFPRHIVNSQLD
HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHH
YFNQGKLNVIFATTSLIEGVNTAAKNIVIFDMKKSNKPLSYFDFNNIKGRAGRMMQHYSG
HCCCCCEEEEEEEHHHHHHHHHHHCEEEEEEECCCCCCCEEECCCCCCCHHHHHHHHHCC
NIFYFDTPPLKTLEKVDIPLIEQKDNLQSEVLINLESTDVKDNLKERYDTIKSSVSEELW
CEEEECCCCHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
TIFRENYYDVESQKQLYNYLIQNPNLLTDLSWNNHSPSYDTLLQTMKAISHGLDNVSNNS
HHHHHCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
YKHIALKANKISKGNIKDVIDSEVQYQLDKADNEDLHKVYNKAIFDIFKFVRTEAKFKIP
EEEEEEEECCCCCCCHHHHHCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
KKMSVLQSIVNYILEDKKADYSSFIAKLENEGVGGSKSILLDYGVPSTAIKKIRTNLGST
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHCCCCH
EIIDYIKNNLDSLNFTNYEREIVEKL
HHHHHHHCCCCCCCCCHHHHHHHHHC
>Mature Secondary Structure
MDKQLQDFNLGFLIARDISESQDYHKLIEVLERWDSVHDTLKPVFVDLIESFGFYPYLND
CCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
EKLSSLNLSAKYRNEFHKSNISIGGDEKIRFHSEQKRIEEIISKKQNIILSAPTSFGKSL
CCCCCCCCCHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHCCCCEEEECCHHHHHHH
LIEEFISRKIYKNIIIIQPTLALIDETRKKLRKYTAYNIVVNTKQELSDNNIFILTSERV
HHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHEEEEEECHHHCCCCCEEEEECHHH
LELFPKISEIKIDLFVIDEFYKISNSKSDERVSQLNIAFYKIMQINSPQLLLLTPNVDDI
HHHCCCHHHEEEEEEEEEHHHHHCCCCCHHHHHHHHHHEEEEEECCCCEEEEECCCCCHH
SSDFLNKYNIKFISTEYSLVNQNITHIEYSGKDSDKKEKLFELLKSIPDQTIVYVRSPKR
HHHHHHCCCEEEEEEHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCC
AEELSLEYITRITKIGVELPIIQWIDENISEEWNLKIILNHGIGMHNGQFPRHIVNSQLD
HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHH
YFNQGKLNVIFATTSLIEGVNTAAKNIVIFDMKKSNKPLSYFDFNNIKGRAGRMMQHYSG
HCCCCCEEEEEEEHHHHHHHHHHHCEEEEEEECCCCCCCEEECCCCCCCHHHHHHHHHCC
NIFYFDTPPLKTLEKVDIPLIEQKDNLQSEVLINLESTDVKDNLKERYDTIKSSVSEELW
CEEEECCCCHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
TIFRENYYDVESQKQLYNYLIQNPNLLTDLSWNNHSPSYDTLLQTMKAISHGLDNVSNNS
HHHHHCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
YKHIALKANKISKGNIKDVIDSEVQYQLDKADNEDLHKVYNKAIFDIFKFVRTEAKFKIP
EEEEEEEECCCCCCCHHHHHCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
KKMSVLQSIVNYILEDKKADYSSFIAKLENEGVGGSKSILLDYGVPSTAIKKIRTNLGST
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHCCCCH
EIIDYIKNNLDSLNFTNYEREIVEKL
HHHHHHHCCCCCCCCCHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]