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The map label for this gene is ycgR [H]

Identifier: 195978476

GI number: 195978476

Start: 1409315

End: 1410217

Strand: Direct

Name: ycgR [H]

Synonym: Sez_1371

Alternate gene names: 195978476

Gene position: 1409315-1410217 (Clockwise)

Preceding gene: 195978475

Following gene: 195978477

Centisome position: 69.62

GC content: 41.97

Gene sequence:

>903_bases
ATGTCGCTTTTTTCAAATCTGCCACCCAGCGTGCTTCAATGGTTTGCGATTTTTCTATCCATTATCATTGAAGCCCTGCC
TTTTGTATTTTTAGGGACTATTTTATCTGGCTGTATTGAGGTTTTCGTCACGCCTGATTTAGTTCAAAGATACCTCCCTC
AAAATAAGTGGCTAAGAATTTTATTTGGTACCTTTATTGGCTTTGTTTTTCCTTCCTGTGAATGTGGTATCATTCCTATT
ATTGATCGTTTTTTAGAAAAGAAGGTGCCTAGCTACACTGCTGTTCCCTTTTTAGCAACCGCTCCAATTATTAATCCGAT
TGTTTTATTTGCTACCTACTCTGCCTTTGGGAATTCGCTGCGCTTTCTCATGCTAAGGCTTTTAGGTGCCATTTTAGTTG
CTGTCAGCCTTGGCATCATGCTAGCCTTCATTGTTGATGAGAACATTCTCAAGGAATCAGCCCAGCCGGTGCATTGTCAT
ACTTACAGTCACGAAAGCCTGCCAAAACGGCTTTACTTGGCACTGGCTCACGCTATTGACGAATTTTTTGATACAGGAAG
GTATCTAGTCTTTGGGACCCTGATTGCTTCAGCCATGCAGATTTATCTGCCAACAAAGGTGCTGACAGCGATCGGACATA
GCCCTTTGACAGCCATCTTAGTCATGATGCTCTTAGCCTTTATCCTATCTCTTTGCAGTGAGGCTGATGCCTTTATTGGA
GCTTCGTTATTGTCAACCTTTGGAGTTGCTCCTGTTTTAGCCTTTCTCTTGATTGGCCCTATGGTTGACATCAAAAACCT
CATGATGATGCTCAATTCCTTTAAGGGAGCCTTTATTGTTCAATTTATCAGTGTATCAGCTGTGATGATTACCATATACT
GCTTACTTGTGGGGGTGCTGTGA

Upstream 100 bases:

>100_bases
GATGGAAAGCTAGTCACTGAAAAACCAAAGCCACAAGTCAAGACAGCTAAGCAGGACTAGCCCTTATTGGCGTCGTTAAC
ATATAGAAAGGATACGGTGA

Downstream 100 bases:

>100_bases
TGATTCGCTTTTTAATTTTAGCAGGCTATTTTGAGTTGACCATGTATCTAGAGCTATCTGGCAAGCTAAATCAATATATC
AATATTCGTTATGCTTACCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MSLFSNLPPSVLQWFAIFLSIIIEALPFVFLGTILSGCIEVFVTPDLVQRYLPQNKWLRILFGTFIGFVFPSCECGIIPI
IDRFLEKKVPSYTAVPFLATAPIINPIVLFATYSAFGNSLRFLMLRLLGAILVAVSLGIMLAFIVDENILKESAQPVHCH
TYSHESLPKRLYLALAHAIDEFFDTGRYLVFGTLIASAMQIYLPTKVLTAIGHSPLTAILVMMLLAFILSLCSEADAFIG
ASLLSTFGVAPVLAFLLIGPMVDIKNLMMMLNSFKGAFIVQFISVSAVMITIYCLLVGVL

Sequences:

>Translated_300_residues
MSLFSNLPPSVLQWFAIFLSIIIEALPFVFLGTILSGCIEVFVTPDLVQRYLPQNKWLRILFGTFIGFVFPSCECGIIPI
IDRFLEKKVPSYTAVPFLATAPIINPIVLFATYSAFGNSLRFLMLRLLGAILVAVSLGIMLAFIVDENILKESAQPVHCH
TYSHESLPKRLYLALAHAIDEFFDTGRYLVFGTLIASAMQIYLPTKVLTAIGHSPLTAILVMMLLAFILSLCSEADAFIG
ASLLSTFGVAPVLAFLLIGPMVDIKNLMMMLNSFKGAFIVQFISVSAVMITIYCLLVGVL
>Mature_299_residues
SLFSNLPPSVLQWFAIFLSIIIEALPFVFLGTILSGCIEVFVTPDLVQRYLPQNKWLRILFGTFIGFVFPSCECGIIPII
DRFLEKKVPSYTAVPFLATAPIINPIVLFATYSAFGNSLRFLMLRLLGAILVAVSLGIMLAFIVDENILKESAQPVHCHT
YSHESLPKRLYLALAHAIDEFFDTGRYLVFGTLIASAMQIYLPTKVLTAIGHSPLTAILVMMLLAFILSLCSEADAFIGA
SLLSTFGVAPVLAFLLIGPMVDIKNLMMMLNSFKGAFIVQFISVSAVMITIYCLLVGVL

Specific function: Unknown

COG id: COG0701

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0718 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005524 [H]

Pfam domain/function: PF03773 DUF318 [H]

EC number: NA

Molecular weight: Translated: 32986; Mature: 32855

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLFSNLPPSVLQWFAIFLSIIIEALPFVFLGTILSGCIEVFVTPDLVQRYLPQNKWLRI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHH
LFGTFIGFVFPSCECGIIPIIDRFLEKKVPSYTAVPFLATAPIINPIVLFATYSAFGNSL
HHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RFLMLRLLGAILVAVSLGIMLAFIVDENILKESAQPVHCHTYSHESLPKRLYLALAHAID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHH
EFFDTGRYLVFGTLIASAMQIYLPTKVLTAIGHSPLTAILVMMLLAFILSLCSEADAFIG
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ASLLSTFGVAPVLAFLLIGPMVDIKNLMMMLNSFKGAFIVQFISVSAVMITIYCLLVGVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLFSNLPPSVLQWFAIFLSIIIEALPFVFLGTILSGCIEVFVTPDLVQRYLPQNKWLRI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHH
LFGTFIGFVFPSCECGIIPIIDRFLEKKVPSYTAVPFLATAPIINPIVLFATYSAFGNSL
HHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RFLMLRLLGAILVAVSLGIMLAFIVDENILKESAQPVHCHTYSHESLPKRLYLALAHAID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHH
EFFDTGRYLVFGTLIASAMQIYLPTKVLTAIGHSPLTAILVMMLLAFILSLCSEADAFIG
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ASLLSTFGVAPVLAFLLIGPMVDIKNLMMMLNSFKGAFIVQFISVSAVMITIYCLLVGVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]