| Definition | Streptococcus equi subsp. zooepidemicus MGCS10565, complete genome. |
|---|---|
| Accession | NC_011134 |
| Length | 2,024,171 |
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The map label for this gene is 195978398
Identifier: 195978398
GI number: 195978398
Start: 1328231
End: 1329715
Strand: Direct
Name: 195978398
Synonym: Sez_1293
Alternate gene names: NA
Gene position: 1328231-1329715 (Clockwise)
Preceding gene: 195978396
Following gene: 195978403
Centisome position: 65.62
GC content: 44.31
Gene sequence:
>1485_bases ATGAAAAACATTGCTTTTGATTCCAACAAATACCTAAGCTTACAAAGGAATCATATTTTAGAACGTATCAAGCAATTTGA CGGTAAGCTCTACATGGAATTTGGCGGAAAAATGCTTGAGGATTTTCATGCGGCGCGTGTCTTGCCTGGCTATGAGCCTG ACAACAAAATCAAGCTACTAAAGGAGCTCAAGGATCAGGTTGAGATTGTCATCACCATCAATGCCAATAATATTGAACAT TCCAAAACGCGTGGTGACCTAGGAATCTCCTACGACCAGGAAGTGCTCCGTTTAATTGATACCTTTAATGCCTTAGATAT CTATGTTGGCTCAGTTGTGATCACGCAATACAACCATCAGGCAGCTGCGGACCATTTTCAAAAGCAATTAGCCAAAAACG GTATTACGTCTTATCGTCACTACCCAATCAAGGGCTATCCAACAGATATTAACCACATCATTTCTCCTGAGGGTATGGGG AGAAATGACTATATCAAGACTAGTCGTAACCTGATTGTTGTCACAGCTCCTGGTCCTGGCTCTGGAAAATTAGCGACCTG CATCTCACAGCTCTATCATGACCAACTAAATGGCATCACATCAGGCTATGCAAAGTTTGAAACATTTCCTGTTTGGAATC TTCCGCTCCACCACCCTGTAAACCTAGCCTATGAGGCTGCCACTGCTGATTTAGATGATGTGAACATGATTGATCCCTTT CATCTGGAGGCTTACGGGAAAACAGCAGTCAATTACAATCGTGATATTGAGGTCTTTCCAGTATTAAACAGGACATTTGA ACGCATTTTAAGCCAATCCCCCTATGCATCTCCAACAGATATGGGGGTTAATATGGTCGGCTTTTCCATTGTTAATGAGG AGGCTGCTATTGAAGCCTCAAAGCAAGAAATCATTCGCCGTTACTATCAAACCTTGGTAGACTTCAAAGCAGAGCGCGTG ACCGAAACTGCGGTTAAAAAGCTTGAGCTCCTGATGAACGACATCGGTGTCACTCCCAAGGATCGACAGGTGACTCTAAT CGCTAGGCAAAAAGCAGAGCTAACTGGTCAGCCTGCCCTAGCCCTTCAGCTTCCAAATGGTCAGGTAGTCACCGGTAAAA CATCTGATTTGTTTGGTCCGACCGCTGCTGTTATCATCAATGCTATCAAAACACTGGCCCACATTAGTAAGGAAACGCAT CTCATTGAGCCAGAATATGTCAAGCCCATTCAAGGGCTCAAGATTAATCACCTAGGCAGTCACAACCCTAGGCTACACGC TAATGAAATCCTAATGGCGCTGGCTATCACAGCAATGAACAACAACCAAGCCGATCTAGCCATGAAAGAATTAGGAAATC TCAAGGGCAGCGAAGCGCATTCAACCGTTATCCTGACCAACGAGGACAAACATGCTCTCAGACAGCTCGGTATCAATGTG ACCTTTGACCCTGTTTATCAGCACCATAAGCTCTATCGCAGCTAA
Upstream 100 bases:
>100_bases TTTTATCCCCTAGCTGCTTAGAAGAAGAGGCTAATTTTTAGACAAATCATTCACTTCTCACTATTTCTTTGCTATAATGC TTAGCAGAGGTGAAAAATAA
Downstream 100 bases:
>100_bases AGCCAAACGTCCAGCTAAAATCAAGCTGGACGTTTTTTGATATGACTTGTATCAGCTAGTCAGAGGATCGTTTTTTACTT GTCACAAACATGGTCAGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 494; Mature: 494
Protein sequence:
>494_residues MKNIAFDSNKYLSLQRNHILERIKQFDGKLYMEFGGKMLEDFHAARVLPGYEPDNKIKLLKELKDQVEIVITINANNIEH SKTRGDLGISYDQEVLRLIDTFNALDIYVGSVVITQYNHQAAADHFQKQLAKNGITSYRHYPIKGYPTDINHIISPEGMG RNDYIKTSRNLIVVTAPGPGSGKLATCISQLYHDQLNGITSGYAKFETFPVWNLPLHHPVNLAYEAATADLDDVNMIDPF HLEAYGKTAVNYNRDIEVFPVLNRTFERILSQSPYASPTDMGVNMVGFSIVNEEAAIEASKQEIIRRYYQTLVDFKAERV TETAVKKLELLMNDIGVTPKDRQVTLIARQKAELTGQPALALQLPNGQVVTGKTSDLFGPTAAVIINAIKTLAHISKETH LIEPEYVKPIQGLKINHLGSHNPRLHANEILMALAITAMNNNQADLAMKELGNLKGSEAHSTVILTNEDKHALRQLGINV TFDPVYQHHKLYRS
Sequences:
>Translated_494_residues MKNIAFDSNKYLSLQRNHILERIKQFDGKLYMEFGGKMLEDFHAARVLPGYEPDNKIKLLKELKDQVEIVITINANNIEH SKTRGDLGISYDQEVLRLIDTFNALDIYVGSVVITQYNHQAAADHFQKQLAKNGITSYRHYPIKGYPTDINHIISPEGMG RNDYIKTSRNLIVVTAPGPGSGKLATCISQLYHDQLNGITSGYAKFETFPVWNLPLHHPVNLAYEAATADLDDVNMIDPF HLEAYGKTAVNYNRDIEVFPVLNRTFERILSQSPYASPTDMGVNMVGFSIVNEEAAIEASKQEIIRRYYQTLVDFKAERV TETAVKKLELLMNDIGVTPKDRQVTLIARQKAELTGQPALALQLPNGQVVTGKTSDLFGPTAAVIINAIKTLAHISKETH LIEPEYVKPIQGLKINHLGSHNPRLHANEILMALAITAMNNNQADLAMKELGNLKGSEAHSTVILTNEDKHALRQLGINV TFDPVYQHHKLYRS >Mature_494_residues MKNIAFDSNKYLSLQRNHILERIKQFDGKLYMEFGGKMLEDFHAARVLPGYEPDNKIKLLKELKDQVEIVITINANNIEH SKTRGDLGISYDQEVLRLIDTFNALDIYVGSVVITQYNHQAAADHFQKQLAKNGITSYRHYPIKGYPTDINHIISPEGMG RNDYIKTSRNLIVVTAPGPGSGKLATCISQLYHDQLNGITSGYAKFETFPVWNLPLHHPVNLAYEAATADLDDVNMIDPF HLEAYGKTAVNYNRDIEVFPVLNRTFERILSQSPYASPTDMGVNMVGFSIVNEEAAIEASKQEIIRRYYQTLVDFKAERV TETAVKKLELLMNDIGVTPKDRQVTLIARQKAELTGQPALALQLPNGQVVTGKTSDLFGPTAAVIINAIKTLAHISKETH LIEPEYVKPIQGLKINHLGSHNPRLHANEILMALAITAMNNNQADLAMKELGNLKGSEAHSTVILTNEDKHALRQLGINV TFDPVYQHHKLYRS
Specific function: Unknown
COG id: COG4868
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0371 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014999 [H]
Pfam domain/function: PF08903 DUF1846 [H]
EC number: NA
Molecular weight: Translated: 55374; Mature: 55374
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNIAFDSNKYLSLQRNHILERIKQFDGKLYMEFGGKMLEDFHAARVLPGYEPDNKIKLL CCCCCCCCCCEEEEHHHHHHHHHHHHCCEEEEHHCHHHHHHHHHHHCCCCCCCCHHHHHH KELKDQVEIVITINANNIEHSKTRGDLGISYDQEVLRLIDTFNALDIYVGSVVITQYNHQ HHHHCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHEECEEEEEECCCH AAADHFQKQLAKNGITSYRHYPIKGYPTDINHIISPEGMGRNDYIKTSRNLIVVTAPGPG HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEECCCCEEEEECCCCC SGKLATCISQLYHDQLNGITSGYAKFETFPVWNLPLHHPVNLAYEAATADLDDVNMIDPF CCHHHHHHHHHHHHHHCCCCCCCHHEEEEEEECCCCCCCCCEEEEHHCCCCCCCCCCCCC HLEAYGKTAVNYNRDIEVFPVLNRTFERILSQSPYASPTDMGVNMVGFSIVNEEAAIEAS EEEECCCEEECCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCHHHHHHH KQEIIRRYYQTLVDFKAERVTETAVKKLELLMNDIGVTPKDRQVTLIARQKAELTGQPAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCHHCCCCCEE ALQLPNGQVVTGKTSDLFGPTAAVIINAIKTLAHISKETHLIEPEYVKPIQGLKINHLGS EEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCEECCCHHHCCCCCCEEECCCC HNPRLHANEILMALAITAMNNNQADLAMKELGNLKGSEAHSTVILTNEDKHALRQLGINV CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHCCCCE TFDPVYQHHKLYRS EEHHHHHHHHHHCC >Mature Secondary Structure MKNIAFDSNKYLSLQRNHILERIKQFDGKLYMEFGGKMLEDFHAARVLPGYEPDNKIKLL CCCCCCCCCCEEEEHHHHHHHHHHHHCCEEEEHHCHHHHHHHHHHHCCCCCCCCHHHHHH KELKDQVEIVITINANNIEHSKTRGDLGISYDQEVLRLIDTFNALDIYVGSVVITQYNHQ HHHHCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHEECEEEEEECCCH AAADHFQKQLAKNGITSYRHYPIKGYPTDINHIISPEGMGRNDYIKTSRNLIVVTAPGPG HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEECCCCEEEEECCCCC SGKLATCISQLYHDQLNGITSGYAKFETFPVWNLPLHHPVNLAYEAATADLDDVNMIDPF CCHHHHHHHHHHHHHHCCCCCCCHHEEEEEEECCCCCCCCCEEEEHHCCCCCCCCCCCCC HLEAYGKTAVNYNRDIEVFPVLNRTFERILSQSPYASPTDMGVNMVGFSIVNEEAAIEAS EEEECCCEEECCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCHHHHHHH KQEIIRRYYQTLVDFKAERVTETAVKKLELLMNDIGVTPKDRQVTLIARQKAELTGQPAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCHHCCCCCEE ALQLPNGQVVTGKTSDLFGPTAAVIINAIKTLAHISKETHLIEPEYVKPIQGLKINHLGS EEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCEECCCHHHCCCCCCEEECCCC HNPRLHANEILMALAITAMNNNQADLAMKELGNLKGSEAHSTVILTNEDKHALRQLGINV CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHCCCCE TFDPVYQHHKLYRS EEHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA