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The map label for this gene is citD [H]

Identifier: 195978119

GI number: 195978119

Start: 1032855

End: 1033163

Strand: Direct

Name: citD [H]

Synonym: Sez_0994

Alternate gene names: 195978119

Gene position: 1032855-1033163 (Clockwise)

Preceding gene: 195978118

Following gene: 195978120

Centisome position: 51.03

GC content: 43.69

Gene sequence:

>309_bases
ATGGAAATCAAACAAATTGCTGTTGCTGGTTCGCTTGAATCCAGCGACATGATGATAACAATATCACCTAATGATGGTCA
GGGAATCGTTTTGGAATTGGATTCAAACGTTGAAAAACAATTTGGCAATCATATCAGAGCATTAATCAAGACAACACTCG
CCAGGCTGGGCGTTGAGTCAGCAACGATCGAAGCTGTTGATAAGGGAGCCTTGGATTGTACCATTCAGGCAAGAACAATT
GCAGCAGTCCATCGTGCTGCTGGAGTTGAGCATTACAACTGGAAGGAGATCGACTCATGGAACGCTTAA

Upstream 100 bases:

>100_bases
TTGTTGTATTAGGAATTCTCTATATTGTAGCAGAGGCTCTGATTAAGCTATTTCCAGTAGAAAAATAATAGAATATGATC
TAAACAAGGAGGTCAATCAA

Downstream 100 bases:

>100_bases
GAAGAACGATGATGTTTGTTCCAGGCGCTAATGCGGCTATGCTAAGAGACGCACCCTTGTTTGGAGCGGACTCTATCATG
TTTGATTTAGAAGATTCAGT

Product: citrate lyase subunit gamma

Products: acetate; oxaloacetate

Alternate protein names: Citrate lyase gamma chain [H]

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MEIKQIAVAGSLESSDMMITISPNDGQGIVLELDSNVEKQFGNHIRALIKTTLARLGVESATIEAVDKGALDCTIQARTI
AAVHRAAGVEHYNWKEIDSWNA

Sequences:

>Translated_102_residues
MEIKQIAVAGSLESSDMMITISPNDGQGIVLELDSNVEKQFGNHIRALIKTTLARLGVESATIEAVDKGALDCTIQARTI
AAVHRAAGVEHYNWKEIDSWNA
>Mature_102_residues
MEIKQIAVAGSLESSDMMITISPNDGQGIVLELDSNVEKQFGNHIRALIKTTLARLGVESATIEAVDKGALDCTIQARTI
AAVHRAAGVEHYNWKEIDSWNA

Specific function: Covalent carrier of the coenzyme of citrate lyase [H]

COG id: COG3052

COG function: function code C; Citrate lyase, gamma subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CitD family [H]

Homologues:

Organism=Escherichia coli, GI1786834, Length=96, Percent_Identity=48.9583333333333, Blast_Score=93, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006495
- InterPro:   IPR009662
- ProDom:   PD015389 [H]

Pfam domain/function: PF06857 MdcD [H]

EC number: 4.1.3.6

Molecular weight: Translated: 11049; Mature: 11049

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIKQIAVAGSLESSDMMITISPNDGQGIVLELDSNVEKQFGNHIRALIKTTLARLGVES
CCCHHEEEECCCCCCCEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCC
ATIEAVDKGALDCTIQARTIAAVHRAAGVEHYNWKEIDSWNA
HHHHHHCCCCEEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEIKQIAVAGSLESSDMMITISPNDGQGIVLELDSNVEKQFGNHIRALIKTTLARLGVES
CCCHHEEEECCCCCCCEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCC
ATIEAVDKGALDCTIQARTIAAVHRAAGVEHYNWKEIDSWNA
HHHHHHCCCCEEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: citrate

Specific reaction: citrate = acetate + oxaloacetate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA