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The map label for this gene is abrB [C]

Identifier: 195978110

GI number: 195978110

Start: 1025961

End: 1027157

Strand: Direct

Name: abrB [C]

Synonym: Sez_0985

Alternate gene names: 195978110

Gene position: 1025961-1027157 (Clockwise)

Preceding gene: 195978109

Following gene: 195978114

Centisome position: 50.69

GC content: 42.02

Gene sequence:

>1197_bases
ATGTTACTGATTGATGGTTCCACTTGCCTGATTACTATTGATATTGCGAGCCAGGTTTGGGTGAGTTTCTTCTCCAATAA
TTCTGACTTATGCTATAATAGAGCTATTGATATTAAGGGGGATAAAGGGGCTGGTATGCTTTCGATTCTAATGACTTTAT
TTGTTGGGACGCTGGGAGGGCTTGTTGCTAAGCGGCTGAGTATTCCTGCCCCTTTTATGATTGGCAGTATGGTAGCTGTT
GCCCTAGCTTCTATCCTGACAAAGCAGGTAGAGGCTATTAGCCCCATGAAGATTTTTGCTCAGATTATTAGTGGTGCCTA
TATTGGCCAAAGCGTCAGCAAATCTGACCTGCTTAATCTTCCTAAGCTAGCCAAGTCTATTATTAGTCTTATGGCTTTGT
TTACACTCAATATGCTTTGTCTTGGTCTGGTATTGGTTTATTGTTTTGACCTTGATCCTGTGACAGCATTACTGAGCTGT
TTACCAGGAGGTATTATGGACGTTTCGCTTATGGCTGTTGACATGGGGGCAAAGGCTGATATTGTTGCAACCCTGCAGTC
AGCTCGGCTTATCGGTATGTTATTACTTCTCCCTGCTTGGGTAGCCTTTTGGGTCAATCGCTTTGACCCAAAAGCAAAAG
CTACTAAAAAAAAGATAGTCAAAAGTGCTAGCTCCCAAGATACAAGACCTTCTAGGAAAGAGCAGCTATGGAATAATGTC
CAGGTTTTAAGCATTGCTACCATTGGAGGTTTGATCGGTTTAGGGCTAAAGATACCTGTAGGCGCTCTGATTGTTTCTTT
GCTTTTTTCAACAGCACTGAAGGTGCTTCGGCAAACAAGTCAAATGCCAAGTACACTTCGTTATATAGCTCAGGTTTTTG
CTGGCTCTATTATTGGAACAAGCTTTACTCAGGATAGTCTGCTTCAAATGGGACGTCTGATTGTTCCTATTCTTTTACTT
TTGAGTAGCTATCTGATCATCAATCTCTTTTTTGGCTATATCATGTATAAAAAAGGTATCTTGGATTTGCAATCGGCACT
CTTTGCCTCATCGCCTGCTGGTGCGACAGACATTTCACTATTGGCTGGTGAGCTTGGCGGAGATATGCCTAAAATCGCTG
GCATTCAAATCAGTCGAACCCTCTATACTGTTGTCATCATGCCCTTGTTGGTTAAATGGCTCATTAGTATATGGTAA

Upstream 100 bases:

>100_bases
TTTAGCTTTTTTGGTTAGTTTACAGCAATGAGCTGATTTCTCTGCTTTATTGGAATTGGCTTTTTGTTAGTCGAAAAAGT
TAGGTGATCTGATATGGACT

Downstream 100 bases:

>100_bases
ACAGAAAAGCCCCTCAGAGCATGAACCAGAGATATCTTACTATTACCAAATAGCACATCAAGGGTTTTGTTCAGGCTTGG
AGCTGTTATAATTGATTTTC

Product: putative ammonia monooxygenase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MLLIDGSTCLITIDIASQVWVSFFSNNSDLCYNRAIDIKGDKGAGMLSILMTLFVGTLGGLVAKRLSIPAPFMIGSMVAV
ALASILTKQVEAISPMKIFAQIISGAYIGQSVSKSDLLNLPKLAKSIISLMALFTLNMLCLGLVLVYCFDLDPVTALLSC
LPGGIMDVSLMAVDMGAKADIVATLQSARLIGMLLLLPAWVAFWVNRFDPKAKATKKKIVKSASSQDTRPSRKEQLWNNV
QVLSIATIGGLIGLGLKIPVGALIVSLLFSTALKVLRQTSQMPSTLRYIAQVFAGSIIGTSFTQDSLLQMGRLIVPILLL
LSSYLIINLFFGYIMYKKGILDLQSALFASSPAGATDISLLAGELGGDMPKIAGIQISRTLYTVVIMPLLVKWLISIW

Sequences:

>Translated_398_residues
MLLIDGSTCLITIDIASQVWVSFFSNNSDLCYNRAIDIKGDKGAGMLSILMTLFVGTLGGLVAKRLSIPAPFMIGSMVAV
ALASILTKQVEAISPMKIFAQIISGAYIGQSVSKSDLLNLPKLAKSIISLMALFTLNMLCLGLVLVYCFDLDPVTALLSC
LPGGIMDVSLMAVDMGAKADIVATLQSARLIGMLLLLPAWVAFWVNRFDPKAKATKKKIVKSASSQDTRPSRKEQLWNNV
QVLSIATIGGLIGLGLKIPVGALIVSLLFSTALKVLRQTSQMPSTLRYIAQVFAGSIIGTSFTQDSLLQMGRLIVPILLL
LSSYLIINLFFGYIMYKKGILDLQSALFASSPAGATDISLLAGELGGDMPKIAGIQISRTLYTVVIMPLLVKWLISIW
>Mature_398_residues
MLLIDGSTCLITIDIASQVWVSFFSNNSDLCYNRAIDIKGDKGAGMLSILMTLFVGTLGGLVAKRLSIPAPFMIGSMVAV
ALASILTKQVEAISPMKIFAQIISGAYIGQSVSKSDLLNLPKLAKSIISLMALFTLNMLCLGLVLVYCFDLDPVTALLSC
LPGGIMDVSLMAVDMGAKADIVATLQSARLIGMLLLLPAWVAFWVNRFDPKAKATKKKIVKSASSQDTRPSRKEQLWNNV
QVLSIATIGGLIGLGLKIPVGALIVSLLFSTALKVLRQTSQMPSTLRYIAQVFAGSIIGTSFTQDSLLQMGRLIVPILLL
LSSYLIINLFFGYIMYKKGILDLQSALFASSPAGATDISLLAGELGGDMPKIAGIQISRTLYTVVIMPLLVKWLISIW

Specific function: Seems To Be Involved In The Regulation Of Aidb. [C]

COG id: COG3180

COG function: function code R; Putative ammonia monooxygenase

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42714; Mature: 42714

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLIDGSTCLITIDIASQVWVSFFSNNSDLCYNRAIDIKGDKGAGMLSILMTLFVGTLGG
CEEECCCEEEEEEEHHHHHHHHHHCCCCCEEEECEEECCCCCCCHHHHHHHHHHHHHHHH
LVAKRLSIPAPFMIGSMVAVALASILTKQVEAISPMKIFAQIISGAYIGQSVSKSDLLNL
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHCH
PKLAKSIISLMALFTLNMLCLGLVLVYCFDLDPVTALLSCLPGGIMDVSLMAVDMGAKAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHCCCCCCHH
IVATLQSARLIGMLLLLPAWVAFWVNRFDPKAKATKKKIVKSASSQDTRPSRKEQLWNNV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCC
QVLSIATIGGLIGLGLKIPVGALIVSLLFSTALKVLRQTSQMPSTLRYIAQVFAGSIIGT
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
SFTQDSLLQMGRLIVPILLLLSSYLIINLFFGYIMYKKGILDLQSALFASSPAGATDISL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
LAGELGGDMPKIAGIQISRTLYTVVIMPLLVKWLISIW
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLLIDGSTCLITIDIASQVWVSFFSNNSDLCYNRAIDIKGDKGAGMLSILMTLFVGTLGG
CEEECCCEEEEEEEHHHHHHHHHHCCCCCEEEECEEECCCCCCCHHHHHHHHHHHHHHHH
LVAKRLSIPAPFMIGSMVAVALASILTKQVEAISPMKIFAQIISGAYIGQSVSKSDLLNL
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHCH
PKLAKSIISLMALFTLNMLCLGLVLVYCFDLDPVTALLSCLPGGIMDVSLMAVDMGAKAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHCCCCCCHH
IVATLQSARLIGMLLLLPAWVAFWVNRFDPKAKATKKKIVKSASSQDTRPSRKEQLWNNV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCC
QVLSIATIGGLIGLGLKIPVGALIVSLLFSTALKVLRQTSQMPSTLRYIAQVFAGSIIGT
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
SFTQDSLLQMGRLIVPILLLLSSYLIINLFFGYIMYKKGILDLQSALFASSPAGATDISL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
LAGELGGDMPKIAGIQISRTLYTVVIMPLLVKWLISIW
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA