Click here to switch to the map view.

The map label for this gene is 195978089

Identifier: 195978089

GI number: 195978089

Start: 1003212

End: 1003550

Strand: Direct

Name: 195978089

Synonym: Sez_0962

Alternate gene names: NA

Gene position: 1003212-1003550 (Clockwise)

Preceding gene: 195978088

Following gene: 195978090

Centisome position: 49.56

GC content: 41.0

Gene sequence:

>339_bases
ATGTCATTGATTCATAAAATTCCAACAAGCGCAGTCATTGATTTAAAGGCAGAGGTGCCAATTGAAGAGGATCAAATATT
AAGTCGAACACTAGTTCAAAGAAAAGATTTGGGCATAACCCTGCTTTCATTAGATAAAGGACAAGAAATCGGTCGTCATT
CATCACCGGGAGATGCAATGGTTAACGTGTTAAGTGGAGTAGCTGACATTACTATTGGAGAAGCCTGTTATGAGGTAGCT
GCTGGCGAGACGATCATCATGCCTGCTAATATTCCTCATAGCTTATTTGCTAAGGAAGCCTTCCAGATGCTTTTAGTTGT
TGTAAAGCCGGAGGCTTAG

Upstream 100 bases:

>100_bases
TTTAAAGATGCGTCATTTCTTCAACAAAACTGGAAAAAAGCTGTGTTATATTGCCGCTGTAAGTCAAAAATAACTAGAAT
AATGATAAAGGAGAAGTGAC

Downstream 100 bases:

>100_bases
CATGTTGGCTGATTTATTAGAATTAGTAAGGTATCATGATGACCAAATAGCTAGTCGTTCGCTTCATCAAAGCCTAGGCT
TTAAGCAATCTGTTGTTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: Cupin 2 Domain-Containing Protein; Cupin Region; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin 2 Barrel; 5-Nucleotidase SurE; Cytoplasmic Protein; Cupin Domain Containing Protein; Cupin Domain Protein; Cupin Superfamily Barrel Domain-Containing Protein; Cupin 2 Conserved Barrel

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MSLIHKIPTSAVIDLKAEVPIEEDQILSRTLVQRKDLGITLLSLDKGQEIGRHSSPGDAMVNVLSGVADITIGEACYEVA
AGETIIMPANIPHSLFAKEAFQMLLVVVKPEA

Sequences:

>Translated_112_residues
MSLIHKIPTSAVIDLKAEVPIEEDQILSRTLVQRKDLGITLLSLDKGQEIGRHSSPGDAMVNVLSGVADITIGEACYEVA
AGETIIMPANIPHSLFAKEAFQMLLVVVKPEA
>Mature_111_residues
SLIHKIPTSAVIDLKAEVPIEEDQILSRTLVQRKDLGITLLSLDKGQEIGRHSSPGDAMVNVLSGVADITIGEACYEVAA
GETIIMPANIPHSLFAKEAFQMLLVVVKPEA

Specific function: Unknown

COG id: COG1917

COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12019; Mature: 11888

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLIHKIPTSAVIDLKAEVPIEEDQILSRTLVQRKDLGITLLSLDKGQEIGRHSSPGDAM
CCCCHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHH
VNVLSGVADITIGEACYEVAAGETIIMPANIPHSLFAKEAFQMLLVVVKPEA
HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHEEHEECCCC
>Mature Secondary Structure 
SLIHKIPTSAVIDLKAEVPIEEDQILSRTLVQRKDLGITLLSLDKGQEIGRHSSPGDAM
CCCHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHH
VNVLSGVADITIGEACYEVAAGETIIMPANIPHSLFAKEAFQMLLVVVKPEA
HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHEEHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA